Bombus impatiens (common eastern bumble bee): 100744197
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Entry
100744197 CDS
T04362
Name
(RefSeq) histone deacetylase 6
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
bim
Bombus impatiens (common eastern bumble bee)
Brite
KEGG Orthology (KO) [BR:
bim00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bim01009
]
100744197
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bim03019
]
100744197
04131 Membrane trafficking [BR:
bim04131
]
100744197
03036 Chromosome and associated proteins [BR:
bim03036
]
100744197
Enzymes [BR:
bim01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
100744197
Protein phosphatases and associated proteins [BR:
bim01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100744197
Messenger RNA biogenesis [BR:
bim03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
100744197
Membrane trafficking [BR:
bim04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
100744197
Chromosome and associated proteins [BR:
bim03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
100744197
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
DUF604
Motif
Other DBs
NCBI-GeneID:
100744197
NCBI-ProteinID:
XP_012249713
UniProt:
A0A6P8M1Y7
LinkDB
All DBs
Position
Unknown
AA seq
1160 aa
AA seq
DB search
MSDPVICKNLYSAVKQLADSEIELIKAIENSEKINNRNIKNTMSVTDKKSAKNSAKMFNV
RPSAALIAAKHEATQRVLQRKKSNNVFVHDIYQKAIDAYNIKRKETGIVFDRSMTEHKCL
WDPSYPECPARLIRVMQRCEELGLINRCKFVTPRQASEDEILMKHSQEQIDILKATDECT
DIDSLELLSSTYDAIYIHPSTYQLSLLAVGSTINLVESICKEEIQNGMAIIRPPGHHAMK
SEYCGYCFFNNVAIAAEKVLSSNLASKILIVDWDIHHGQATQQMFYNDPRVIYFSIHRYE
NGEFWPNLRESNFHFVGDGLGEGYNFNVPLNKTGMTNADYLAIFQQVLLPMAYEFQPDLI
IVSAGYDAALGCPEGEMLLTPACYAHLLSSLLSLASGKVAVILEGGYCLKSLAESAALTL
RTLLGDPCPMLETLTLPSISVRDTILNTIYAHKPYWKCYQYQDTYSINSTTNNKEGSTNQ
YLPVVTFKGTDIKPEVYETRNCYPTQNKEVIEMIEKQLNTLIQFTNLSKAPNKVCIVYDD
RMLKHCDMSNDNHPEKPHRINIIYKKYQECNLLDRCYVQQGRSATREELILVHSKEYIDS
IKDTENLNPKELKRQAENYNSVYLHPETWTSACISTGSLLQVVDSVLNGESQSGIAIVRP
PGHHAAENTACGFCIFNNIAVAARYAVEFHHVKRVLIVDWDVHHGNGTQSIFEEDPKILY
MSVHRYDNGNFFPNSKRANYSYVGSLSGEGFTVNIPWNKKGMGDAEYIAAFQQIIMPIAY
QFNPELVLVSAGFDACIGDPLGGCFVTPEMYGHLTHWLSSLANGRIILSLEGGYNINSVA
HAMAICTKSLLGDPLPILENGQTPCASAIHTINNVIKTQKQYWTHLVFNLSLPKERVLPK
PKVPHIKTNERVIDSEEILKHSESKIALEEIETEKMQTRQKNLTTWKLINKVASQEDCEK
LQEFLKSVHERRTHTTINTSYNDEGSKYTKKCMNQDEEERHSDENITNFAAGSSGEQGER
ASAQMTGNKSLHDYLLENSQALVDGDMFAVIPLRECPHLDSVKDVPVSGIDIYSPCIECE
SNVENWICLRCYTVHCARSINQHGLIHAEEMEHPLALSFSDLSVWCYKCEAYIDNVRLFA
VRNAVHQSKFNEELPWTYEI
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatcctgtgatctgcaaaaatttatactctgctgttaaacaattagcagacagt
gaaatcgagttaataaaagctatagaaaattcagagaagataaataatagaaatattaaa
aatactatgtctgtgacagataagaaaagtgccaaaaattctgcaaaaatgtttaatgtt
cgtccatctgctgctttaatagcagctaaacatgaagcaacacaacgtgtactacaaaga
aagaaatctaacaatgtttttgtacatgatatatatcaaaaagctattgatgcatataat
ataaaaaggaaggaaactggcattgtatttgatcgttctatgacagaacataaatgcctt
tgggatccaagttatccagaatgtcctgctagattgataagagttatgcagagatgtgag
gagttaggtttaataaatagatgtaaattcgttacaccaagacaagcctcagaggatgaa
atactaatgaagcacagccaagaacagatagatattttgaaggctactgatgaatgtaca
gatatagatagtttagaattattatcatcaacatatgatgccatttatatacatccttct
acctatcaattgtctttgttagctgtgggttcaacaataaatttagtggaaagcatttgc
aaagaagaaattcagaatggtatggccattataaggccaccaggacatcatgcaatgaaa
tcagaatattgtggatattgtttcttcaataatgtcgcaattgctgctgaaaaagtttta
agtagcaatttagctagtaaaattttaattgttgattgggatatacaccatggacaagct
actcagcaaatgttctataatgacccacgagtaatttatttttcaattcaccgttatgaa
aatggagaattttggccaaatcttagagaatctaatttccattttgttggagatggttta
ggagaaggatataattttaatgtgccacttaataaaactggcatgaccaatgctgattat
ttagccatatttcaacaagttttattgccaatggcctatgagtttcaacctgatcttata
atagtatcagctggatatgatgcagcgttgggctgtcctgagggtgaaatgttgctaaca
ccagcatgttatgctcatttattatcatcattattgagtttagcctctgggaaagttgct
gttatattggagggtggttattgtttaaaatcattagcagaaagtgcagcattaacacta
cgtactttgttaggtgatccatgccctatgttagaaactcttacattaccttcaataagc
gtacgtgataccattttaaatacaatttatgcacataaaccatattggaaatgctatcaa
taccaagatacatacagtattaatagtacaacaaataataaagaaggaagtactaatcaa
tatttaccagtagttacattcaaaggaactgatattaagcctgaagtgtatgagactcga
aattgctacccaactcaaaataaagaagttatcgaaatgatagaaaagcagttaaataca
ttaatacagtttactaatttatctaaagcacctaacaaagtgtgcattgtttatgatgat
agaatgttaaaacattgtgatatgtctaatgataatcatccagaaaaaccacatcgtatt
aatattatttataaaaaatatcaagagtgcaatttacttgatcgatgttatgtgcaacag
ggacgaagtgcaacaagagaagaattaatattagtccattcaaaagaatatatagattca
ataaaagatacagaaaacttaaacccaaaagagctaaaaaggcaggcagaaaattataat
tcggtttatttgcatcctgaaacctggacaagtgcctgtatatcaactggatcattatta
caagtagttgatagcgtattaaatggagaaagtcaatccggtattgctattgttaggcct
ccaggccatcatgctgcagagaatacagcatgtggtttttgtatctttaacaatattgct
gtagcagctagatatgcggtagaatttcatcatgtaaaaagagtattgatagtagattgg
gatgtacatcatggtaatggaactcaatccatctttgaggaggaccctaaaattttgtat
atgtctgtccatcgttatgataatggcaatttttttccaaattctaaacgagcaaattac
tcttatgtcggttctctatcaggagaaggtttcactgttaacattccatggaataagaaa
ggaatgggcgatgcagaatatatagcagcatttcaacagataataatgccaattgcttat
cagtttaatccggaattagtcttagtttctgcgggtttcgatgcatgtattggggatcct
ctaggaggttgtttcgtgacaccagaaatgtacggacacttaacacattggctatcttct
ttagctaatggtcgtattattcttagtcttgaaggaggttacaatattaattcagtcgcg
catgcaatggctatttgcacaaaatctttgcttggtgatcctttaccgatattagagaat
ggacaaactccatgcgcgagcgctattcacactataaataatgttataaaaacacaaaaa
caatattggacgcatttagtatttaatttatctttaccgaaagagagagtacttcctaag
cccaaagttccacatataaagacaaatgaacgtgttatagacagtgaagaaatattaaag
cattcagaatctaagatagcattggaagaaatagaaacagaaaaaatgcaaactaggcag
aagaatcttacaacttggaagctgataaataaagtggcctcacaagaagattgtgagaaa
ttacaagagtttcttaaatctgtacatgagcgacgtacacatacaacaattaatacttct
tataatgacgaaggttccaagtatacaaagaaatgcatgaatcaggatgaagaagaaaga
cattctgatgaaaatattaccaattttgctgctggtagtagtggtgaacaaggcgaaaga
gcaagtgcgcaaatgactggaaataaaagtttacatgattatttattggaaaattcgcaa
gcattagtggatggagacatgtttgcagtgatacctttacgagaatgtccacatttggat
agtgtcaaggatgtaccagtttctggaattgatatatattcaccatgtatagaatgtgaa
agcaatgttgaaaactggatctgtttacggtgttatactgttcattgtgctcgtagtatt
aatcaacatggtttaatacacgctgaagaaatggaacatccattggccctaagtttcagt
gatttatcagtttggtgttacaaatgtgaggcatacatagataatgtgcgattattcgcc
gtgcgcaatgctgtacaccaaagtaaatttaatgaggaattaccatggacatatgaaata
taa
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integrated database retrieval system
