Bos indicus (zebu cattle): 109555290 Help Entry 109555290         CDS       T04792                                  Symbol HDAC6 Name (RefSeq) histone deacetylase 6 isoform X1   KO K11407   histone deacetylase 6 [EC:3.5.1.98] Organism biu  Bos indicus (zebu cattle) Pathway biu04613   Neutrophil extracellular trap formation biu05014   Amyotrophic lateral sclerosis biu05034   Alcoholism biu05203   Viral carcinogenesis Brite KEGG Orthology (KO) [BR:biu00001]  09150 Organismal Systems   09151 Immune system    04613 Neutrophil extracellular trap formation     109555290 (HDAC6)  09160 Human Diseases   09161 Cancer: overview    05203 Viral carcinogenesis     109555290 (HDAC6)   09164 Neurodegenerative disease    05014 Amyotrophic lateral sclerosis     109555290 (HDAC6)   09165 Substance dependence    05034 Alcoholism     109555290 (HDAC6)  09180 Brite Hierarchies   09181 Protein families: metabolism    01009 Protein phosphatases and associated proteins [BR:biu01009]     109555290 (HDAC6)   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:biu03019]     109555290 (HDAC6)    04131 Membrane trafficking [BR:biu04131]     109555290 (HDAC6)    03036 Chromosome and associated proteins [BR:biu03036]     109555290 (HDAC6) Enzymes [BR:biu01000]  3. Hydrolases   3.5  Acting on carbon-nitrogen bonds, other than peptide bonds    3.5.1  In linear amides     3.5.1.98  histone deacetylase      109555290 (HDAC6) Protein phosphatases and associated proteins [BR:biu01009]  Protein serine/threonine phosphatases   Phosphoprotein phosphatases (PPPs)    Protein phosphatase-1     PP1-interacting proteins (PIPs)      109555290 (HDAC6) Messenger RNA biogenesis [BR:biu03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Stress granule specific factors      109555290 (HDAC6) Membrane trafficking [BR:biu04131]  Autophagy   Aggrephagy    Other aggrephagy associated proteins     109555290 (HDAC6) Chromosome and associated proteins [BR:biu03036]  Eukaryotic type   Histone modification proteins    HDACs (histone deacetylases)     Class II HDACs      109555290 (HDAC6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Hist_deacetyl zf-UBP zf-UBP_var Motif Other DBs NCBI-GeneID:  109555290 NCBI-ProteinID:  XP_019811607 UniProt:  A0A6P5BM32 LinkDB All DBs Position X:complement(55588130..55615266) Genome browser AA seq 1129 aa AA seqDB search MTSTGQDSTTPKERRSRHNPHSPTHDSSITSKRGVKKSAILRSSPSLAEVKKKGRMKKLS QTAEQDLIMGLQGLNLNLESRTLSGTGLVFDEQLNEFHCLWDDSFPERPERLHAIKEQLI QEGLLDRCVSFQARFAEKEELMLVHSLEYIDLMETTQYMNEEELHVLADTYDSVYLHPNS YTCACLASGSVLRLVDAVLEAEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQ KHDIQRVLIVDWDVHHGQGIQFAFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGLGQG QGYTINVPWNQVGMQDADYIAAFLHVLLPVAFEFQPQLVLVAAGFDALQGDPKGEMAATP AGFAQLTHLLMGLAEGKLILSLEGGYNLHSLAEGVSATLHTLLGDPCPVLESPGAPCPSA QASLSCTLEALEPFWESLVRSVESLEEKDTVEKDDVEEKEEERLPQSPELSVPIWPVLQA RTGLVYDQQMMDHHNLWDNYHPEMPQRIHFIMHHLDELGLAKRCHSLPARPATDAELLTC HSAEHLERLRATEKMKTRELRREGANYDSIYICSSTFACAQLAAGAACRLVEAVLAGEVL NGVAVVRPPGHHAEPDAACGFCFFNSVAVAARHAQAISGHALRILIVDWDIHHGNGTQHI FEEDPSVLYISLHRYDHGTFFPMGNEGACTRIGKATGTGFTVNVAWNGPRMGDADYLAAW HRLVLPVAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHQLMGLANGHIILILE GGYNLTSISESMAACTRSLLGDPLPLLTRLRPPLSGAQASITKTIQVHRRYWRSLRVMKR KNKEELSSSKLITKKPSQPASPGLANVTTTVEGNILDTGMGQAASEASVKESTPDQTESA TAPVELTQGQSSDTATQGAALDQTISEGATGGAELIQNPPASCINNRIPPALPVQGATAQ TSPSKLMANLRILDLDSTTQEPSEEEGLLGEAAGGQDTNESVPVQVFGDHADTDEVMFYA VRPLLWCPHLAAVCPIPETGLNVTQPCQDCGTLQENWVCLSCYQVYCGRYINAHMLQHHE GSGHPLVLSYADLSAWCYHCQAYVHHKDLLAVKNIAHQNKFGEDIPHSD NT seq 3390 nt NT seq  +upstreamnt  +downstreamnt atgacctccaccggtcaggattccaccacacccaaggagcgaaggagtaggcacaatccc cactctcccacccacgactccagcatcacctcgaagcgaggtgttaaaaagagtgccata ctccgctccagccccagtctagcggaggtaaagaagaaaggcagaatgaagaagcttagc caaacagccgagcaagacctaatcatggggctacaagggctgaatctgaacctggagtcc aggacactgtctggcactggcttggtgttcgatgaacagctaaatgaattccactgcctc tgggatgacagcttcccggaacgcccagagcggctccatgccatcaaggagcaactgatc caggagggcctcctggaccgctgcgtgtcctttcaggcccgattcgctgaaaaggaggag ctgatgttggttcacagcctagaatatattgatctgatggaaacgacccagtacatgaac gaggaggagctccacgtcctagcagatacctatgactcagtttatctgcatccgaactca tacacctgtgcctgcctggcctcaggctctgtcctcaggctggtggatgcagtcctggag gctgagatccggaatggcatggccatcatcaggcctcctggacaccacgcccagcacagt ctcatggatggatattgcatgttcaaccacgtggccgtggctgcccgttacgctcaacag aagcatgatattcagagggtccttattgtggattgggatgtgcaccatggtcagggaata cagttcgcctttgaccaagatcctagtgtcctctatttctccatccaccgctatgagcag ggtcggttctggccccatcttaaggcctctaattggtccaccacaggtttaggccaaggc cagggatacaccatcaatgtgccttggaaccaggtggggatgcaagatgctgactacatc gccgctttccttcacgtcctcctgccagtcgcatttgagttccagccccagctggtcctg gtagctgctggatttgatgccctccaaggggaccccaagggtgagatggccgccactcca gcagggttcgcccagctcacccatctgctcatgggtctggcagaaggcaagctgatcctc tcactggagggtggctataatctccactctctggctgaaggtgtcagcgccaccctccac acccttctgggtgacccttgtcctgtgttagagtctcctggtgccccctgcccaagtgcc caggcatcactctcctgtactctggaagccctggaacccttctgggagagccttgtgaga tcagttgagagcctggaagaaaaggacactgtggagaaggatgatgtggaagagaaggag gaagagagactgccacagtcccctgagctctccgttccgatatggccagtgctgcaggct cgcacggggttggtctatgaccagcagatgatggaccaccacaacttgtgggataactac caccctgagatgccccagcggatccactttatcatgcatcacctggatgaactgggcctt gccaagcgctgccactccctacccgcaaggcccgctacagatgctgagctgctcacctgc cacagtgctgagcacttggaacgtctacgggccacggagaagatgaagacccgggagctg cgccgcgagggtgccaactatgactccatctacatctgctccagcacttttgcctgcgca cagctggctgcaggcgccgcctgtcgcctggtggaggcagtactggcaggagaggtttta aatggtgttgctgtagtgcgacctcctggccaccatgcagagccggatgcagcttgtggt ttctgtttttttaattctgtggctgtggctgctcgccatgcccaggccatcagtgggcat gctctgcggatcctgatcgtggactgggacatccatcatggtaatggaactcagcacata tttgaggaggaccccagtgtgctgtacatttccctgcaccgctatgatcatggtaccttc tttcccatggggaacgagggtgcctgtacccggataggtaaagctacaggcacaggattc actgtcaatgtggcctggaatggaccccgcatgggtgatgctgactacctggctgcctgg caccgtctggtgcttcctgttgcttacgagtttaacccagaactcgtgctggtctcagct ggcttcgacgctgctcggggggatcctctgggcggctgccaggtgtcgcctgagggctat gcccacctcacccaccagctgatgggcttggccaatggccatatcatcctaatcctagag ggtggttataacctgacgtccatctcagagtccatggctgcctgcactcgctcccttctt ggggatccactgcccctgctcacccggctgcggcccccactatctggagcccaggcttct atcactaaaaccatccaagtccatcgaagatactggcgcagtttgcgggtcatgaagcgc aaaaacaaagaggaactctccagttctaagttgatcaccaagaagccatcccaaccagcc agtcctgggttagccaatgtgacgaccacagtggaagggaacatcctggatacaggcatg ggacaggccgcctcagaagcatctgtgaaagagtccactccagatcagactgagtcagcg acagctccagtagaacttactcagggccagtcctcagacacagccacacaaggagctgca ctggaccagaccatctcagagggggccacagggggagctgaactgatccaaaaccctcca gcctcatgcatcaacaacaggattcctcctgccttacccgtgcaaggagccacagcccag acatcccctagtaagctgatggcaaacctcagaatactggacctagatagcacgactcag gagccctcagaagaggaaggactactaggagaggcagctggaggtcaggacacaaatgag tcagtgccagtgcaggtctttggagatcatgctgacactgacgaggtcatgttttatgcc gtgagaccactgctttggtgtcctcatttggcggcagtatgccccatacctgagacaggg ctgaatgtgacccaaccttgtcaggactgtggaacactccaggagaactgggtgtgtctg tcttgctatcaggtctactgcggtcgttacatcaacgctcatatgctccagcaccatgaa ggttcaggacacccactagtactcagctatgccgacctgtctgcctggtgttaccactgt caggcctatgtccaccacaaggatctcctagcagtgaagaacatcgcccaccagaacaag tttggggaagacataccccattcagactaa

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