Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110154455
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Entry
110154455 CDS
T05002
Symbol
hdac6
Name
(RefSeq) histone deacetylase 6
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bpec01009
]
110154455 (hdac6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpec03019
]
110154455 (hdac6)
04131 Membrane trafficking [BR:
bpec04131
]
110154455 (hdac6)
03036 Chromosome and associated proteins [BR:
bpec03036
]
110154455 (hdac6)
Enzymes [BR:
bpec01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
110154455 (hdac6)
Protein phosphatases and associated proteins [BR:
bpec01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
110154455 (hdac6)
Messenger RNA biogenesis [BR:
bpec03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
110154455 (hdac6)
Membrane trafficking [BR:
bpec04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
110154455 (hdac6)
Chromosome and associated proteins [BR:
bpec03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
110154455 (hdac6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
110154455
NCBI-ProteinID:
XP_020774105
LinkDB
All DBs
Position
Unknown
AA seq
1050 aa
AA seq
DB search
MFNDLSSRSAAVGTGLVYSEEFTKHRNLWDTSHPECPERLQKIVEELEKQELLSRCTRIQ
PREATEKELLLIHSQKYVDLMRSTQTMTEAELRSLSEKYDSVYLHPDTFSVAAQAVGSVL
QLVDRVLSSELRNGFALIRPPGHHAQRDQANGYSVFNNVAVAARYAQTKHRIHRVLIVDW
DVHHGQGIQYSFQDDPNVLYFSIHRFEHGSFWPHLSESNSDFTGDTRGAGRNINLPWNKT
GMTDADYIAAFYHLLLPVAYEFQPQLVLVSAGFDSAEGDPKGEMCVSPQCFQVLTRLLMS
LAEGRIILALEGGYNLAQTAVCAAACVKAFLGGACPPLSLPTAPSDSALESISQTISSVY
PYWASLQVLEGCSVSGAEVLRESTNQGSSCCPSPASSVSTKTGLVYDEKMMEHLNMWDRH
HPEQPQRISKIYSRHQQQGLEQRCERLEVRLATEEELLMCHSADHIARMKSTSDLKPRDL
FKLGEEFNSIFLNDQSYECALMAAGGCFRAVEAVLSGQVSNAVAIVRPPGHHAEKSFPCG
FCLFNTAALTARFAQKVSNNPSLRVLILDWDVHHGNGTQHIFEDDDSVLYVSLHRYDNGN
FFPSSLDAACDKVGVARGAGFNVNVAWSGGRMGDADYIAAFHRVVMPIATEFNPDLVLVS
AGFDAARGDPLGGYNVTPEGYAHLTHLLLTLASGKLVMILEGGYNLTSISESMAFCTSVL
LGDPPPSILSPPPHHSAVATINEVIRHHAPFWKSLRIHIPDSVRESLPSPKHRGKCSSKG
KGRKSDQSDKPPLPPSDLEQLTQELAGLDITQTAAVGGARPKLRPSSGKPNNQREEKAES
SEKSQSESQVVAATDSDMPESSPVKREESEFSPVKGEGSEGSPVKGAESQPLPLKGEESE
LSPVKGAESAAKSEAAGACGWSKINLQVSYEVEMGGDTLFVVDPLPWCPHLDSVKPLPPG
GLNVFKPCEDCGSEVENWVCLTCYKVFCGRYVNEHMVIHGVTAEHPVVLSYADLSVWCYL
CESYIHNQILFEAKNAAHWAKFGEEVPPWT
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgttcaatgacctgtcgagtcgatcagctgctgtaggtactggactagtgtattctgaa
gagttcaccaaacataggaacctctgggacacaagtcacccagaatgtccggagagactg
cagaagattgtggaggagctggaaaaacaggaactgcttagtcgctgcaccagaatccag
ccacgagaggcaacggaaaaagaactgctgctcattcactcgcagaagtatgtggatctg
atgcgctcgacccaaacaatgaccgaggctgaactgagatctctgtcagaaaaatacgac
tccgtttatctccatccggacacattttctgtagcggctcaggctgtgggctccgtcctg
cagctcgtcgacagagtcctctcctctgaactcagaaatggatttgctctgatcagacct
ccaggacaccacgctcagagagaccaggccaacggctacagtgtgtttaataatgtggcc
gtagctgctcgatacgctcagaccaagcacagaatccacagagttctcatcgtggactgg
gatgtgcatcatgggcagggcatccagtatagcttccaggatgaccccaatgttctgtac
ttcagcattcaccgctttgagcacggatcattctggcctcatctttctgagtcaaactcc
gattttacgggagacacaagaggagccggacgaaacatcaacttgccctggaacaagact
ggaatgactgatgcagattacattgctgctttctatcatctcctgcttcctgttgcgtac
gagttccagcctcagttggtcctggtttccgctggttttgattctgcagaaggagaccca
aagggcgagatgtgcgtcagtcctcagtgcttccaggttctaacacgtcttctcatgagt
ttagctgaaggacgcatcattctggctctagagggcggttataacttggcacaaacagca
gtttgcgctgcagcctgtgtgaaagctttcctgggtggagcctgtccccccctgtctcta
cccactgctccctccgacagtgctctggagtctatatctcagaccattagctccgtttat
ccttattgggcttctctccaagtcctggagggatgctcggtctctggtgctgaggtattg
agggaatcgaccaatcagggaagctcgtgttgcccaagtcccgcctcttcagtatccaca
aagactggactggtttatgatgagaagatgatggagcacctcaatatgtgggacagacat
catccagaacaaccacagagaatttcaaagatctactctcgacatcagcagcagggtctg
gagcaacgctgtgagagactcgaggtccgactggcgacagaggaggagctcctgatgtgc
cacagtgcagatcacatcgctcgtatgaagtccacctctgatctgaagcccagagacttg
ttcaaactgggggaggagtttaactcaatcttcctgaatgatcagagttatgagtgtgct
ctgatggcggcaggcggctgtttcagggctgtggaggctgtgctctctggacaggtctct
aatgctgtggccatagtgcgccctcctggacaccacgcagagaagagcttcccctgtggc
ttctgcctcttcaacacagcggctcttacagctcgatttgctcagaaagtttcaaacaat
ccttcattacgggtcctgattctggactgggacgttcaccatggcaacgggacgcaacac
atatttgaagatgacgacagtgtgttgtacgtatcacttcatcgctatgacaatggcaac
ttcttcccctcctcgttggacgctgcgtgtgacaaagtgggcgtggccagaggggcgggc
tttaatgtgaacgtggcctggagtggagggaggatgggcgatgcagactatatcgccgcg
tttcacagagtcgtcatgcccatcgccaccgagttcaacccagatctggtcctggtctcg
gctgggtttgatgcggcgcgtggagatcctttaggaggctacaatgtgactccagaggga
tacgcccacctcactcaccttctgttaactttggcctctgggaaactagtcatgatcctg
gagggagggtacaacttgacgtctatctctgagtccatggccttctgtacttctgtgtta
ctcggagacccgcctccatcgatcctgtccccgcctcctcatcacagcgctgtggcgacc
atcaacgaggtcatcagacaccacgctcccttttggaagtcactgcggatacacatccca
gattcggtgcgcgagtcattgccatccccaaagcatcgtgggaagtgcagttctaaagga
aaaggcaggaagtctgatcagagtgacaaacctccacttcctccctcagacctggagcaa
ctcacgcaagaactggccggattagacatcacgcagactgctgctgtgggcggggccaga
ccaaagctccgccccagctcaggaaaaccaaacaatcagagagaggagaaggcggagtca
tcagaaaagagtcagtcagagtcacaggttgttgctgccactgattcagatatgccagag
tcctcacctgtgaaaagggaggagtctgaattctcacctgtgaaaggggaaggatctgaa
ggctcacctgtgaaaggggcggagtctcaacccttacctctgaaaggggaggagtctgaa
ctgtcacctgtgaaaggggcggagtctgctgccaagtcggaggcagctggagcctgtggt
tggtccaagataaacttacaggtgtcatatgaagtggagatgggcggagacaccttgttt
gtggtggaccctcttccctggtgccctcatctagactctgtcaaaccgctgccccctggt
ggtctgaacgtgttcaaaccctgtgaggactgtggctctgaggtggagaactgggtctgt
ctcacctgctacaaggttttctgcggccgatacgtgaatgagcacatggtgattcatgga
gtcacagcagaacatcctgtggttctgagctacgctgatctgtctgtgtggtgctacctc
tgcgaatcctacatccacaaccagattttatttgaagccaagaatgcagctcactgggca
aaatttggagaagaggttccaccctggacttaa
DBGET
integrated database retrieval system
