Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110156193
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Entry
110156193 CDS
T05002
Symbol
bard1
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110156193 (bard1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpec03019
]
110156193 (bard1)
04121 Ubiquitin system [BR:
bpec04121
]
110156193 (bard1)
03036 Chromosome and associated proteins [BR:
bpec03036
]
110156193 (bard1)
03400 DNA repair and recombination proteins [BR:
bpec03400
]
110156193 (bard1)
Messenger RNA biogenesis [BR:
bpec03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
110156193 (bard1)
Ubiquitin system [BR:
bpec04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
110156193 (bard1)
Chromosome and associated proteins [BR:
bpec03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
110156193 (bard1)
DNA repair and recombination proteins [BR:
bpec03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
110156193 (bard1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank
Ank_2
zf-RING_6
Ank_4
Ank_5
Ank_3
BRCT
BRCT_2
PTCB-BRCT
zf-RING_5
zf-C3HC4_3
zf-RING_10
RTT107_BRCT_5
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
110156193
NCBI-ProteinID:
XP_020776053
LinkDB
All DBs
Position
Unknown
AA seq
772 aa
AA seq
DB search
MDSDVLQTPTWAKTKEAITNFRRLLLCSKCSHLMKDPVCLGMCEHLLCRSCAGSSAGDGC
VVCHSPAWVKDIQINRQLSSIIELFCGLEDLMNPTQDDSTKQETPVSNQKKNFKIWFSPR
SRKIRCLVEKPSEGTAPESKTPGETTAANTTNASKDLSVFNFTSSSQDSGSSSPQMCNSS
TRNKRQNKKSAPSRKQPSAHATVHAQQKQSVQKMRRLQAINQQWGISEGPIALKDQPCRE
QPHRSGKRVSFGGSAVNSDQPQGTNNELSPGTVTGTIPETISSDRVAESNTEIVDNLDQR
TIAPPNECEAEDDAEKKEETEPSPAMKKSRMEEGHSLDMTPKRPRTSPGTRRRSGGRRIS
SVLSSPSLSSPAGSKAARSPRVELGDSPSSSLGSVSRKSPRLSCGSPAVMKRNHKGETPL
HIAAIKGDVEAVKELLEQGADPNLKDNAGWTPLHEACNLGHLTVVEILVLRGALLNTPGY
ENDSPLHDAVRNGHTAIARLLLQLGASTNVLNLYGKRPADYAVSREMLEIFQEATEGTPN
ANTTLSPAMVKKSVDRSDETLVVILSSKLSSSEQQQLAKLGQLLGARMADTFTESVTHVV
VPDGQMPTTFNTLLGLLVGSWVVKYSWVEACLRAGERVPETPHEAGEGPQRSRNNRYSLL
PPLFDGCFFFLLGSFSSPGKEELTRLLRDGGGQILTRQPKPDSDVTQTVSAASYHAPPGS
DQALCTQYILYDPHGPHKPALIRRGKVWSAPSSWVIQSITAFRLLPVPEPQT
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atggacagtgatgtcctgcaaactccgacatgggcgaaaaccaaagaagcgattacaaac
ttccgaagacttctgctgtgctccaaatgctcgcatttaatgaaggaccctgtttgtctg
ggaatgtgtgaacatttgttatgcaggtcctgcgctggttccagtgcaggcgatgggtgc
gtggtgtgtcacagtcctgcttgggtgaaggacatccagatcaataggcagctgagtagc
atcatagagctattctgtggtctggaggatctcatgaacccaacgcaagacgattcaaca
aaacaagaaacacctgtctctaaccagaagaagaatttcaaaatttggttcagtccacgc
agtcgaaaaatccgctgtctggtggaaaaaccttcagaaggcacagcaccagagagcaag
actcctggagaaaccactgctgcaaacactacaaatgcatcgaaagacctatcagtcttt
aattttacttcctcctctcaagactctggctctagtagtccacaaatgtgcaactcgagc
acaagaaacaaaagacaaaacaagaaaagtgctcctagcagaaaacagccatcagcgcat
gctactgttcacgcccaacagaaacagagcgtgcagaagatgaggaggctgcaggctata
aatcagcagtggggcatctcggaggggcccatagcgttaaaggatcaaccatgcagggag
cagccacacaggtctggtaagagggtttcctttggaggctctgctgtcaactccgaccag
ccccaggggactaataatgaactcagccctggcactgtgactggaactatcccggaaact
atatccagtgaccgagtagccgagtctaacactgaaatagtggacaatttggaccagagg
accatagctcctccaaacgaatgtgaggcagaggacgatgcagagaaaaaggaggaaact
gagccttctcctgctatgaaaaaatcaaggatggaggaaggccactctttagacatgaca
ccaaaacgtcccaggacatcaccagggaccaggaggaggtcggggggtcgtaggatttcc
tctgtcctctcctctccgtctttgtccagtcctgcaggttcaaaggcagcgaggagcccc
agagtggaacttggagacagcccatcctcctccctgggcagtgtcagcagaaaatctccc
cgcctctcctgtggaagccctgcggtgatgaagagaaaccataagggagagacgccgctg
catatagctgccataaagggagacgtagaagctgtcaaagaactgctggagcaaggggca
gaccccaacctcaaggataatgctggctggacacctctgcatgaagcctgcaaccttggg
cacttgacagttgtggaaatccttgttttgagaggagccctcctgaacacgcccggctac
gagaacgattctcctctccacgacgctgtgaggaacggacacactgccatcgccagactg
ctgctgcagctcggagcttccacaaacgtgcttaatctgtatggaaagaggcctgcagat
tatgcagtcagtcgtgagatgctggagattttccaggaagccactgaaggaactccaaat
gctaataccacactgagccctgccatggtaaaaaagagcgtggacagaagcgacgaaaca
ctggtggtgattctgtccagcaagctgtcatcgagcgaacagcaacaactcgccaaattg
ggacagctgctcggggcgagaatggccgacactttcactgaatcagtgactcatgttgtc
gtgcctgatggacagatgccgactacttttaacaccctacttgggctcttggtgggcagc
tgggtggtcaaatacagctgggtggaggcatgtctgcgagcaggcgagagggtgcccgaa
actccccatgaagctggagaaggccctcagcgcagtcgcaacaatagatatagtctgctt
ccccctctttttgatggctgcttcttcttcttgctgggttccttctcaagccctggcaaa
gaggagttgacccggttgcttcgggatggtgggggacagatcctgactcgtcagcctaaa
ccggacagtgatgtgactcagacagtgagtgcggcttcttaccacgcccctcctggctct
gaccaggccctgtgcacccagtacatcctgtacgacccccacggcccacacaagcctgct
ctgatccggagaggcaaagtgtggtctgccccctcctcctgggtcatccagtccatcaca
gctttcagactgctccctgtaccagagcctcagacttga
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integrated database retrieval system
