Paraburkholderia phymatum: Bphy_4003
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Entry
Bphy_4003 CDS
T00704
Name
(GenBank) peptidase M15D vanX D-ala-D-ala dipeptidase
KO
K08641
zinc D-Ala-D-Ala dipeptidase [EC:
3.4.13.22
]
Organism
bph
Paraburkholderia phymatum
Pathway
bph01502
Vancomycin resistance
bph02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bph00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Bphy_4003
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Bphy_4003
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bph01002
]
Bphy_4003
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bph01011
]
Bphy_4003
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
bph01504
]
Bphy_4003
Enzymes [BR:
bph01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.13 Dipeptidases
3.4.13.22 D-Ala-D-Ala dipeptidase
Bphy_4003
Peptidases and inhibitors [BR:
bph01002
]
Metallo peptidases
Family M15: zinc D-Ala-D-Ala carboxypeptidase family
Bphy_4003
Peptidoglycan biosynthesis and degradation proteins [BR:
bph01011
]
Peptidoglycan biosynthesis and degradation
Carboxypeptidase
Bphy_4003
Antimicrobial resistance genes [BR:
bph01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
Bphy_4003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M15
VanY
Motif
Other DBs
NCBI-ProteinID:
ACC73126
UniProt:
B2JPC3
LinkDB
All DBs
Position
2:976855..977421
Genome browser
AA seq
188 aa
AA seq
DB search
MPDKQQLIHITPETHRVELDLAYATANNFTGKPIYKEAHCLLLAPAEAGLRKAVELADSI
GMKLRIFDAYRPPQAQQVLWDFLPDPTFIAELGRGSNHSRGTALDLTLIDSNGEALDMGT
GFDAMVKESEHFHKGLPQHVQRNRLLLLGIMHAAGFTHIASEWWHYEIPGSRALPIIDNS
ESGPLKLM
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacaaacagcaactgatccacatcacgccggaaacgcatcgcgtcgagctcgac
ctcgcgtatgcgacggccaacaatttcaccggcaagccgatttacaaagaagcgcactgc
ctgttgctcgcgcccgccgaagcgggcttgcgcaaagccgtcgaactcgcggacagcatc
ggcatgaagctgcgcattttcgatgcgtaccggccgccgcaagcgcagcaggttctgtgg
gactttctgcccgatccgaccttcatcgcggaactgggacgcggctcgaatcatagccgc
ggcaccgcgctcgatctgaccttgatcgacagcaacggcgaggcgctcgatatgggcacg
ggcttcgatgcgatggtcaaggagtccgagcacttccacaaaggcctgccgcagcacgtg
cagcgcaaccggctactgctgctcggcatcatgcatgcggccggcttcacgcatatcgca
agcgagtggtggcattacgaaatacccggctcgcgcgcgctgcccattatcgacaatagc
gaaagcggcccgttgaaactgatgtaa
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