Bombus pyrosoma: 122571258
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Entry
122571258 CDS
T07776
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
bpyo
Bombus pyrosoma
Brite
KEGG Orthology (KO) [BR:
bpyo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bpyo01009
]
122571258
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpyo03019
]
122571258
04131 Membrane trafficking [BR:
bpyo04131
]
122571258
03036 Chromosome and associated proteins [BR:
bpyo03036
]
122571258
Enzymes [BR:
bpyo01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
122571258
Protein phosphatases and associated proteins [BR:
bpyo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122571258
Messenger RNA biogenesis [BR:
bpyo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
122571258
Membrane trafficking [BR:
bpyo04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
122571258
Chromosome and associated proteins [BR:
bpyo03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
122571258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
Motif
Other DBs
NCBI-GeneID:
122571258
NCBI-ProteinID:
XP_043590754
LinkDB
All DBs
Position
LG9:complement(13380769..13393093)
Genome browser
AA seq
1160 aa
AA seq
DB search
MSDSVICKNLYSAVKQLADSEIELIKAIENSEKINNRNIKNTMSVTDKRSAKKSAKTFNV
RPSAALIAAKHEATQRVLQGKKSNNVFVHDIYQKAIDAYNIKRKETGIVFDRSMAEHKCL
WDSSYPECPARLTRVVQRCEELGLINRCKLVTPRQASEDEILMKHSQEQIDILKATDECT
DVDSLELLSSTYDAIYIHPSTYQLSLLAVGSTINLVESICKEEIQNGMAIIRPPGHHAMK
SEYCGYCFFNNVAIAAEKVLSSNLASKILIVDWDVHHGQATQQMFYNDPRVIYFSIHRYE
NGEFWPNLRESNFHFVGDGLGEGYNFNVPLNKTGMTNADYLAIFQQVLLPMAYEFQPDLI
IVSAGYDAALGCPEGEMLLTPVCYAHLLSSLLSLASGKVAVILEGGYCLKSLAESAALTL
RTLLGDPCPMLETLTLPSISVRDTILNTIYAHKPYWKCYQYQDTYSINSTTNNKEGSTNQ
YLPVVTFKGTDIKPEVYETRNCYPTQNKEVIEMIEKQLNTLIQFTDLSKAPNKVCIVYDD
RMLKHCDMSNDNHPEKPHRINIIYKKYQEYNLLDRCYVQQGRSATREELILVHSKEYIDS
IKDTENLKPKELKKQAETYNSVYLHPETWTSACISTGSLLQIVDSVLNGESQSGIAIVRP
PGHHAGENTACGFCIFNNIAIAARYAVEFHHIKRVLIVDWDVHHGNGTQSIFEEDPKVLY
MSVHRYDNGNFFPNSKRANYSYVGSLSGEGFTVNIPWNKKGMGDAEYIAAFQQIIMPIAY
QFNPELVLVSAGFDACIGDPLGGCFVTPEMYGHLTHWLSSLANGRIILSLEGGYNINSIA
HAMAICTKSLLGDPLPILENGQTPCASAIHTINNVIKTQKQYWTHLVFNLSLPKERVLPK
PKVPHIKTNERVINSEEILKHSESKIALEEIETEKMQTRQKNLTTWKLINKMASQEDCEK
LQEFLKSVHERRTHTTINTSHNDEGSKYTKKCMNQDEKEGHSDENITNFAAGSSGEQGER
ANAQMTGNKSLHDYLLENSQALVDGDMFAVIPLRECPHLDSVKDVPVSGIDIYSPCIECE
SNVENWICLQCYTVHCARSINQHGLIHAEEMEHPLALSFSDLSVWCYKCEAYIDNLQLFA
ARNAAHQSKFNEELPWTYEI
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattctgtgatctgcaaaaatttatactctgctgttaaacaattagcagacagt
gaaatcgagttaataaaagctatagaaaattcagaaaagataaataatagaaatattaaa
aatactatgtctgtgacagataagagaagtgccaaaaagtctgcaaaaacgtttaatgtt
cgtccatctgctgctttaatagcagctaaacatgaagcaacacaacgtgtattacaagga
aagaaatctaacaatgtttttgtacatgatatatatcaaaaagctattgatgcatataat
ataaaaaggaaggaaactggcattgtatttgatcgttctatggcagaacataaatgcctt
tgggattcaagttatccagaatgccctgctagattgacaagagttgtgcagagatgtgag
gagttaggtttaataaatagatgtaaattggttacaccaagacaagcctcagaggatgaa
atactaatgaagcacagccaagaacagatagatattttgaaggctactgatgaatgtaca
gatgtagatagtttagaattattatcatcaacatacgatgccatttatatacatccttct
acctatcaattgtctttgttagctgtgggttcaacaataaatttagtggaaagcatttgc
aaagaagaaattcagaatggtatggccattataaggccaccaggacatcatgcaatgaaa
tcagaatattgtggatattgtttcttcaataatgttgcaattgctgctgaaaaagtttta
agtagcaatttagctagtaaaattttgattgttgattgggatgtacaccatggacaagct
actcagcaaatgttctataatgatccacgagtaatttatttttcaattcaccgttatgaa
aatggtgaattttggccaaatcttagagaatctaatttccattttgttggagatggttta
ggagaaggatataattttaatgtgccacttaataaaactggcatgaccaatgctgattat
ttagccatatttcaacaagttttattgccaatggcctatgagtttcaacctgatcttata
atagtatcagctggatatgatgcagccttgggctgtcctgagggtgaaatgttgctaaca
cctgtatgttatgctcatttactatcatcattattgagtttagcctctgggaaagttgct
gttatattggagggtggttattgtttaaagtcattagcagaaagtgcagcattaacacta
cgtactttgttaggtgatccatgccctatgttagaaactctcacattaccttcaataagt
gtacgcgataccattttaaatacaatttatgcacataaaccatattggaaatgctatcaa
taccaagatacatacagtattaatagtacaacaaataataaagaaggaagtactaatcaa
tatttacctgtagttacattcaaaggaactgatattaagcctgaagtgtacgagactcga
aattgttacccaactcaaaataaagaagttatcgaaatgatagaaaagcagttaaataca
ttgatacagtttactgacttatctaaagcacctaacaaagtgtgcattgtttatgatgat
agaatgttaaaacattgtgatatgtctaatgataatcatccagaaaaaccacatcgtatt
aatattatttataaaaaatatcaagagtacaatttacttgatcgatgttacgtgcaacag
ggacgaagtgcgacaagagaagaattaatattagttcattcaaaagaatatatagattca
ataaaagatacagaaaacttgaaaccaaaagagctaaaaaagcaggcagaaacttataat
tcggtttatttgcatcctgaaacctggacaagtgcctgtatatcaactggatcattatta
caaatagttgatagcgtattaaatggagaaagtcaatccggtattgctattgttaggcct
ccaggacatcatgctggagagaatacagcatgtggtttttgtatctttaacaatattgct
atagcagctagatatgcggtagaatttcatcatataaaaagagtattgatagtagattgg
gatgtacatcatggtaatggaactcaatccatctttgaggaagaccctaaagttttgtat
atgtctgtccatcgttatgataatggcaatttttttccaaattctaaacgagcaaattac
tcttatgtcggttctctatcaggagaaggtttcactgttaacattccatggaataagaaa
ggaatgggcgatgcagaatatatagcagcatttcaacagataataatgccaattgcttat
cagtttaatccagaattagtcttagtttctgcgggtttcgatgcatgtattggggatcct
ttaggaggttgtttcgtaacaccagaaatgtacggacacttaacacactggctatcttct
ttagctaatggtcgtattattcttagtcttgaaggaggttacaatattaattcaatcgcg
catgcaatggctatttgtacaaaatctttgcttggtgatcctttacccatattagagaat
ggacaaactccatgcgcgagcgctattcacactataaataatgttataaaaacacaaaaa
caatattggacgcatttagtatttaatttatctttaccgaaagagagagtacttcctaag
cccaaagttccacatataaagacaaatgaacgtgttataaacagtgaagaaatattaaag
cattcagaatctaagatagcattggaagaaatagaaacagaaaaaatgcaaactaggcag
aaaaaccttacaacttggaagctgataaataaaatggcctcacaagaagattgtgagaaa
ttacaagagtttcttaaatctgtacatgagcgacgtacacatacaacaattaatacttct
cataatgatgaaggttccaagtatacaaagaaatgcatgaatcaggacgaaaaagaagga
cattctgatgaaaatattaccaattttgctgctggtagtagtggcgaacaaggcgaaaga
gcaaatgcgcaaatgactggaaataaaagtttacatgattatttgttggaaaattcgcaa
gcattagtggatggagacatgtttgcagtgatacctttacgagaatgtccacatttggat
agtgtcaaggatgtaccagtttctggaatcgatatatattcaccatgtatagaatgtgaa
agcaatgttgaaaactggatctgtttacagtgttatactgttcactgtgctcgtagtatt
aatcaacatggtttaatacacgctgaagaaatggaacatccattggccctaagtttcagt
gatttatcagtttggtgttacaaatgtgaggcatacatagataatctgcaattatttgcc
gcgcgcaatgctgcacatcaaagtaaatttaatgaagaattaccatggacatatgaaata
taa
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