Bemisia tabaci (sweet potato whitefly): 109044245
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Entry
109044245 CDS
T06019
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
btab
Bemisia tabaci (sweet potato whitefly)
Brite
KEGG Orthology (KO) [BR:
btab00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
btab01009
]
109044245
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
btab03019
]
109044245
04131 Membrane trafficking [BR:
btab04131
]
109044245
03036 Chromosome and associated proteins [BR:
btab03036
]
109044245
Enzymes [BR:
btab01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
109044245
Protein phosphatases and associated proteins [BR:
btab01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
109044245
Messenger RNA biogenesis [BR:
btab03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
109044245
Membrane trafficking [BR:
btab04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
109044245
Chromosome and associated proteins [BR:
btab03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
109044245
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
Motif
Other DBs
NCBI-GeneID:
109044245
NCBI-ProteinID:
XP_018917400
LinkDB
All DBs
Position
Unknown
AA seq
1238 aa
AA seq
DB search
MPTHGIVYAHIQVILFFFKMSSAPKNDSPDQGAPVRRSNRLNSKGRTPSASLIAAKKAAI
ERAKKAQTYVVNIRDIYQLAEDAKAMVNKPTGVVYDKRMVEHHCLWDENYPECPDRFTYV
LSRCQEMGLLPRCKQIQSREASEEEVLKKHSPKQIELLRATENSQNFEELEDISSHYDAI
YIHPSTYRLSLLAAGSTIDLVEAVCKNEIQNGMAIIRPPGHHAMKSEYCGYCFFNNVALA
AQHALDNLGVSKILIVDWDVHHGQATQQMFFDDNRVVYFSIHRYEHGTFWPNLRESDFDY
IGTGAGRGYNFNVPLNKTGMTNTDYLAIFHQLLLPLASEFAPELVLISAGFDAAMGDEKG
EMEITPACYAHLVNSLSAFAHGKIAVILEGGYCLKSLAEGAALTLRSLLGDPVPMIESLG
QPCDSIIETILNVIYTHQDYWQCYQFTEKYKLNEKSELPPTVKKHVPIAPFKFEGEAKLE
KYETRNCYPVQSNETKELIKKRLDDLIYRTQLLAPKPVCFVYDEIMLRHQNPYDGNHPEK
PARLSSIFEKHSEYGLLERLHILKSRVATKEELLLVHKEEHIDAMEQLSELTDSELKSKA
DGFDSIYFNKFSYEAATVAAGSLLQVVDSVLNGDSRAGVAVVRPPGHHAEVEEPCGFCLF
NSASVAAKYAIEMHGLKRVLLLDWDVHHGNGSQEIFEADPQVLYISLHRYDNGAFFPHST
DAAHTVVGEGRGRGFNVNIPWNKRGIGNAEYIAAFHQIVLPIAYQFNPELIIVSAGFDAA
IGDPLGGYKVTPEAYGHFTHWLSSLANGRVILTLEGGYNVRTISYAMTMCTKALLHDPIP
ILDPLTPINPSAIQSIKQVISVQSEFWSALQFLVAIPSDKVLEGKPDELISMMGDLSLKL
GDDANEVTKSYDEKDFGNLSWNCDKNSSNGDDCKVTGISLNNNRHVTPSSVCISSNVSTP
DSLKSDSLNPCFASNCSDSSIVSTPNYLQCDPSTLNFSSVSSLTPNSVKSDCSNFNSSSS
SVASQGLSTPNFIKSDQLGNNSFESSSNYLSCDSSFQVVSPGLSIMNMNNDSPKNSNQKF
TMDDGAGCSSSSASSSQKPENIQTLSDYLAENMELLVGGEMFAVVPKKNCPHLSLVRKVP
ETGVNTKVPCATCSSTAENWSCLTCYTVQCGRYIKGHMAEHSTKEGHPVVLSFSDLSVWC
YGCEAYLDNEVLYEARNAAHQDKFGSALPWSYGPKASS
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atgcccactcatggaattgtttatgctcacatacaagtaattttattttttttcaagatg
tccagtgctcctaagaacgattctccagaccaaggagctcctgttcgtcgttccaatcga
ctgaattccaagggtcgtactccatctgcctctctaattgctgcaaagaaagctgctatc
gaaagagccaaaaaagctcaaacatacgttgtcaacatcagagatatttatcaattggct
gaggatgctaaggctatggtcaataaaccaacaggagttgtgtatgataaacgtatggtg
gaacatcattgtctttgggatgaaaactacccagaatgtcccgacagatttacttacgtt
ctatccaggtgtcaagaaatgggtttacttcctcgatgcaaacagattcaatctcgtgaa
gcaagtgaggaagaagttttgaaaaaacactcaccaaaacaaattgaactgttgagagct
actgaaaatagccaaaattttgaggagttggaagatatttcctcacactatgatgccatt
tatattcaccctagcacatatcgactgtctttgctggcggctggtagtacaatcgacctc
gttgaagctgtttgcaagaatgaaattcagaatggcatggccattatcagaccaccagga
catcatgcaatgaaaagtgaatattgtggttactgcttcttcaacaacgtggcattagca
gcacagcatgctttagacaatcttggtgtatccaaaatacttattgttgactgggatgtc
caccatggacaagcaacacaacaaatgttcttcgacgacaatcgagttgtatatttttct
atacatcgttatgagcatggaacattctggcctaacttaagggaaagtgattttgattac
atcggcacaggtgctggcagagggtacaattttaatgtacctctcaataaaactggaatg
acgaatacagattacttggcgattttccatcagctgcttttacctttagcttcagagttt
gcgcctgagttggttcttatttcggctggctttgacgcagccatgggtgacgaaaaggga
gagatggaaattactccagcctgttacgcacatttggtgaacagtctttctgcctttgct
catggcaaaatcgcagttattcttgagggtggatactgcctgaaatcattagccgaaggt
gcagctttaacactacgttcactcttgggagatccggttcctatgatagaatctctcggg
caaccttgtgacagcataattgaaactattttgaatgtgatttacactcatcaagattac
tggcaatgttatcagttcacggaaaagtacaaactcaacgaaaagagtgaattgcctccg
accgtaaaaaaacatgttcctattgctccattcaagtttgaaggcgaagcaaaacttgaa
aagtatgaaacccgcaactgttaccctgttcaatcaaatgaaaccaaagaattgatcaaa
aaacgattagatgacttaatataccgtactcaacttttagctccaaagcctgtttgcttc
gtctatgatgaaataatgttacgacatcagaatccgtacgatggaaatcatccagaaaaa
ccagcaaggctatcgagtatctttgaaaaacacagtgaatatggactcttagagaggctg
catattcttaagagccgcgtagcgaccaaagaagagctattattagtacataaagaggaa
catatcgatgcaatggagcagctgagtgagctaactgattctgagctaaaatcaaaagcg
gatggttttgactcaatctactttaacaaatttagttatgaggcagcaactgttgcagcg
ggcagtcttttgcaagttgtcgatagtgttttaaatggtgatagtcgggctggtgttgca
gttgtgagaccaccaggtcaccatgctgaggttgaggaaccgtgtggcttctgtctcttc
aattcagcctctgttgctgcaaaatatgcaattgaaatgcatggattgaaaagagttctt
ttgcttgattgggatgtccaccatggtaatggaagtcaggagatattcgaggctgatccg
caagtgctttacatttctttacaccggtatgataatggtgccttcttccctcactctaca
gatgctgcacacacagttgttggtgaagggagaggcaggggctttaatgttaatatccca
tggaataagcgtggcattggtaatgctgagtatattgcagcatttcatcaaattgttctt
ccaattgcatatcagttcaatcctgagcttatcattgtgtcagctggctttgatgctgcc
atcggagatcctcttggtggatacaaagttactcctgaagcatatggccactttacacac
tggttatcaagcttagctaatggtcgagttattttgacgttggaaggagggtacaatgtg
cgcacaatttcttacgctatgaccatgtgcaccaaagccctactacacgaccccattccc
atactcgatcccctcacaccaattaatccaagcgctattcaatcgattaagcaagttatc
agtgttcagtcagaattttggtctgccctccaatttttagtagctattccaagtgacaaa
gttttagaaggaaaaccagacgaactcatctcaatgatgggcgatttatccctaaaattg
ggtgatgacgccaatgaagtaaccaagtcctatgacgaaaaagattttggaaatttgagc
tggaactgtgataaaaattcaagcaatggtgacgattgtaaagtgactggaatctctttg
aacaacaaccgacatgtcacgccatcatctgtttgtatttcttcaaatgtctcaactccc
gattctttgaaaagtgattctcttaacccttgttttgcgtccaattgttcagactcgagt
attgtatcaacgccaaactatttacaatgtgatccatcaactctcaatttttcatcagtt
agtagccttactccaaattccgtaaaaagtgattgctcaaatttcaactcatcgtccagc
tctgtggcctctcaaggcctttcaacaccaaatttcataaaaagtgatcaattaggcaat
aactcctttgaatctagttcaaattacctctcctgtgatagtagttttcaggtagtatca
cctggcttatcgataatgaatatgaataatgattctccgaaaaacagcaatcagaaattc
actatggacgacggagcagggtgctcatcatcctcagcatcatcatctcaaaagcctgaa
aatattcaaactctctcggattacttggcggaaaatatggagcttttggtcggtggagaa
atgtttgctgtggtacccaagaaaaattgtccccacttgtcccttgtcaggaaagtacct
gaaacaggagttaacaccaaagttccttgtgcaacttgtagttcaacagcagaaaattgg
tcctgccttacgtgttacactgttcaatgcggtcgatacataaaaggacacatggctgaa
catagcactaaagagggtcatcctgtggttctcagtttttctgatctctccgtttggtgt
tatggatgtgaagcatatcttgataacgaggttctgtatgaggcacgaaacgcagcgcat
caggacaaatttggctccgcattaccgtggtcttatggtcccaaagcatcctcgtga
DBGET
integrated database retrieval system
