Bombus terrestris (buff-tailed bumblebee): 100646470
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Entry
100646470 CDS
T04364
Name
(RefSeq) histone deacetylase 6
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
bter
Bombus terrestris (buff-tailed bumblebee)
Brite
KEGG Orthology (KO) [BR:
bter00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bter01009
]
100646470
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bter03019
]
100646470
04131 Membrane trafficking [BR:
bter04131
]
100646470
03036 Chromosome and associated proteins [BR:
bter03036
]
100646470
Enzymes [BR:
bter01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
100646470
Protein phosphatases and associated proteins [BR:
bter01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100646470
Messenger RNA biogenesis [BR:
bter03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
100646470
Membrane trafficking [BR:
bter04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
100646470
Chromosome and associated proteins [BR:
bter03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
100646470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
DUF604
Motif
Other DBs
NCBI-GeneID:
100646470
NCBI-ProteinID:
XP_012166786
UniProt:
A0A9B2MM56
LinkDB
All DBs
Position
LG B09:complement(2097396..2103647)
Genome browser
AA seq
1160 aa
AA seq
DB search
MSDSVICKNLHSAVKQLADSEIELIKAIENSEKINNRNIKNTMSMTDKKSAKKSAKMFNV
RPSAALIAAKHEATQRVLKGKKSNNVFVHDIYQKAIDAYNITRKETGIVFDRSMAEHKCL
WDPSYPECPARLTRVIQRCEELGLINRCKLVTPRQASEDEILMKHSQEQIDILKATDECT
DVDSLELLSSTYDAIYIHPSTYQLSLLAVGSTINLVESICKEEIQNGMAIIRPPGHHAMK
SEYCGYCFFNNVAIAAEKVLSSNLASKILIVDWDIHHGQATQQMFYNDPRVIYFSIHRYE
NGEFWPNLRESNFHFVGDGLGEGYNFNVPLNKTGMTNADYLAIFQQVLLPMAYEFQPDLI
IVSAGYDAALGCPEGEMLLTPACYAHLLSSLLSLAAGKVAVILEGGYCLKSLAESAALTL
RTLLGDPCPMLETLTLPSISVRDTILNTIYAHKPYWKCYQYQDTYSINSTTNNKEGSTNQ
YLPVVTFKGTDIKPEVYETRNCYPTQNKEVIEMIEKQLNTLIQFINLSKAPNKVCIVYDD
RMLKHCDMFNDNHPEKPHRINIIYKKYQEYNLLDRCYVQQGRSATREELILVHSKEYIDS
IKDTENLKPKELKKQAETYNSVYLHPETWTSACISTGSLLQVVDSVLNGESQSGIAIVRP
PGHHAGENIACGFCIFNNIAIAAKYAVEFHHVKRVLIVDWDVHHGNGTQSIFEEDPKVLY
ISVHRYDNGNFFPNSKRANYSYVGSLSGEGFTVNIPWNKKGMGDAEYIAAFQQIIMPIAY
QFNPELVLVSAGFDACIGDPLGGCFVTPEMYGHLTHWLSSLANGRIILSLEGGYNINSIA
HAMAICTKSLLGDPLPILENGQTPCASAIHTINNVIKTQKQYWTHLVFNLSLPKERVLPK
PKVPHIKTNERVINSEKILKHSESKIALEEIETEKMQTRQKNLTTWKLINKMASQEDCEK
LQEFLKSVHERRTHTTINTSYNDEGSKYTKKCMNQDEEEGHSDENITNFAAGSSGEQGER
ASAQMTGNKSLHDYLLENSQALVDGDMFAVIPLRECPHLNSVKDVPVSGIDIYSPCIECE
SNVENWICLQCYTVHCARSINQHGLIHAEEMEHPLALSFSDLSVWCYKCEAYIDNLRLFA
ARNAAHQSKFNEELPWTYEI
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgtctgactctgtgatctgcaaaaatttacactctgctgttaaacaattagcagacagt
gaaatcgagttaataaaagctatagaaaattcagaaaagataaataacagaaatattaaa
aatactatgtctatgacagataagaaaagtgccaaaaagtctgcaaaaatgtttaatgtt
cgtccatctgctgctttaatagcagctaaacatgaagcaacacaacgtgtattaaaagga
aagaaatctaacaatgtttttgtacatgatatatatcaaaaagctattgatgcatataat
ataacaaggaaggaaactggcattgtgtttgatcgttctatggcagaacataaatgtctt
tgggatccaagttatccagaatgtcctgctagattgacaagagttatacagagatgtgag
gagttaggtttaataaatagatgtaaattggttacaccaagacaagcctcagaggatgaa
atactaatgaagcacagccaagaacagatagatattttgaaggctactgatgaatgtaca
gatgtagatagtttagaattattatcatcaacatatgatgccatttatatacatccttct
acctatcaattgtctttgttagctgtgggttcaacaataaatttagtggaaagcatttgc
aaagaagaaattcagaatggtatggctattataaggccaccaggacatcatgcaatgaaa
tcagaatattgtggatattgtttcttcaataatgttgcaattgccgctgaaaaagtttta
agtagcaatttagctagtaaaattttgattgttgattgggatatacaccatggacaagct
actcagcaaatgttctataatgatccacgagtaatttatttttcaattcaccgttatgaa
aatggtgaattttggccaaatcttagagaatctaatttccattttgttggagatggttta
ggagaaggatataattttaatgtgccacttaataaaactggcatgaccaatgctgattat
ttagccatatttcaacaagttttattgccaatggcctatgagtttcaacctgatctcata
atagtatcagctggatatgatgcagccttgggctgtcctgagggtgaaatgttgctaaca
cctgcgtgttatgctcatttactatcatcattattgagtttagccgctgggaaagttgct
gttatattggagggtggttattgtttaaaatcattagcagaaagtgcagcattaacatta
cgtactttgttaggtgatccatgtcctatgttagaaactcttacattaccttcaataagt
gtacgtgataccattttaaatacaatttatgcacataaaccatattggaaatgctatcaa
taccaagatacatacagtattaatagtacaacaaataataaagaaggaagtactaatcaa
tatttacctgtagttacattcaaaggaactgatattaagcctgaagtgtacgagactcga
aattgttatccaactcaaaataaagaagttatcgaaatgatagaaaagcagttaaataca
ttaatacagtttattaacttatctaaagcacctaacaaagtgtgcattgtttatgatgat
agaatgttaaaacattgtgatatgtttaatgataatcatccagaaaaaccacatcgtatt
aatattatttataaaaaatatcaagagtacaatttacttgatcggtgttatgtgcaacag
ggacgaagtgcaacaagagaagaattaatattagttcattcaaaagaatatatagattca
ataaaagacacagaaaacttaaaaccaaaagagctaaaaaagcaggcagaaacttataat
tcagtttatttgcatcctgaaacgtggacaagtgcttgtatatcaactggatcattatta
caagtagttgatagcgtattaaatggagaaagtcaatccggtattgctattgttaggcct
ccagggcatcatgctggagagaatatagcatgtggtttttgtatttttaacaatattgct
atagcagctaaatatgcggtagaattccatcatgtaaaaagagtattgatagtagattgg
gatgtacatcatggtaatggaactcaatccatctttgaggaagaccctaaagttttgtat
atatctgtccatcgttatgataatggcaatttttttccaaattctaaacgagcaaattac
tcttatgtcggttctctatcaggagaaggtttcactgttaacattccatggaataagaaa
ggaatgggcgatgcagaatatatagcagcatttcaacagataataatgccaattgcttat
cagtttaatccagaattagtcttagtttctgcgggttttgatgcatgtattggggatcct
ctaggaggttgtttcgtaacaccagaaatgtacggacacttaacacattggctatcttct
ttagctaatggtcgtattattcttagtcttgaaggaggttacaatattaattcaatcgcg
catgcaatggctatttgcacaaaatctttgcttggtgatcctttaccgatattagagaat
ggacaaactccatgcgcgagcgctattcacactataaataatgttataaaaacacaaaaa
caatattggacacatttagtatttaatttatctttaccgaaagagagagtacttcctaag
cccaaagttccacatataaagacaaatgaacgtgtcataaacagtgaaaaaatattaaag
cattcagaatctaagatagcattggaagaaatagaaacagaaaaaatgcaaactaggcag
aaaaaccttacaacttggaagttgataaataaaatggcctcacaagaagattgtgagaaa
ttacaagagtttcttaaatctgtacatgagcgacgtacacatacaacaattaatacttct
tataacgacgaaggttccaagtatacaaagaagtgcatgaatcaggacgaagaagaagga
cattctgatgaaaatattaccaattttgctgctggtagtagtggtgaacaaggcgaaaga
gcaagtgcgcaaatgactggaaataaaagtttacatgattatttgttggaaaattcgcaa
gcattagtggatggagacatgtttgcagtgatacctttacgagaatgcccacatttgaat
agtgtcaaggatgtaccagtttctggaattgatatatattcaccatgtatagaatgtgaa
agcaatgttgaaaactggatctgtttacagtgttatactgttcattgtgctcgtagtatt
aatcaacatggtttaatacacgctgaagaaatggaacatccattggccctaagtttcagt
gatttatcagtttggtgttacaaatgtgaggcatacatagataatctgcgattatttgcc
gcgcgcaatgctgcacatcaaagtaaatttaatgaggaattaccatggacgtatgaaata
taa
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