Beta vulgaris (sugar beet): 104899222
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Entry
104899222 CDS
T03548
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
bvg
Beta vulgaris (sugar beet)
Pathway
bvg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104899222
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvg03019
]
104899222
04121 Ubiquitin system [BR:
bvg04121
]
104899222
03036 Chromosome and associated proteins [BR:
bvg03036
]
104899222
03400 DNA repair and recombination proteins [BR:
bvg03400
]
104899222
Messenger RNA biogenesis [BR:
bvg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
104899222
Ubiquitin system [BR:
bvg04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
104899222
Chromosome and associated proteins [BR:
bvg03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
104899222
DNA repair and recombination proteins [BR:
bvg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
104899222
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
BRCT_2
zf-HC5HC2H
zf-HC5HC2H_2
zf-RING_6
PTCB-BRCT
RTT107_BRCT_5
Prok-RING_4
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-C3HC4_2
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
104899222
NCBI-ProteinID:
XP_010684677
LinkDB
All DBs
Position
7:complement(23955462..23960880)
Genome browser
AA seq
650 aa
AA seq
DB search
MADSQNHAHFLNPWVLHLQKLGLELKCSLCLKVYNKPTLLPCDHIFCSCCVPKSNLFGLE
CPLCKIPYVEQDLRQAPLVENVANIYKSLDASFSMHMLNSDVRKGFVQCSLPAKSRFPNQ
IAKRSMDSSQSGNSAIGTCDNMEQHEAVYVDMNQMELSPGSSPSSGASKGVDNDSRDPGC
SEDIAGRCPSKKFAKRTADDFGTQGSDEGHDLYSKKQKQQSQVLSEMLQGCTTSVAANMQ
NSASTDSGINNGNNFGNQVLEHDTASLLNFVCAFCHTWKTTEGSGQMQHFANGREVFGSD
AGRSNVIHVHQSCIEWAPQIYYENDTTMKNLDKELARAGKLKCTTCGLKGAALGCYAKSC
RRSYHVTCAYEIAECRWDMTDFLMLCPHHASQKFPSEKVRKPAVKKCSSAEVHLVSSCNE
QKKLHDLDFWATSPTGAKNWVLCGSSLSADEKYMLVKFANLCGATVTKAWNPNVTHVIAA
TDANGACSRTLKVLMAILSGRWILKTDWIEACMKSKCPIDEEPYEISLDNHDCSDGPKTG
RLRVLNNAPKLFSSLKFFFNGNFVAAYKHDLQNLIRAAGGTILESEQPLQYSDNETCHPS
TTIVVYNGDSIEVNEVLNAEKLASESGSQVIAHTWILDSIASGALKPFIH
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggcggattcacaaaaccatgcacatttcctcaatccatgggttcttcatcttcagaaa
ttaggccttgaattaaaatgctctctctgtttgaaggtatataataagccgactttgcta
ccatgtgaccacattttctgcagttgttgtgtacccaaatcgaatttatttgggttagag
tgccccctttgcaaaataccctatgtcgaacaagatttgaggcaagctccgttggtagaa
aacgtagcgaacatctacaagagtttggatgcttctttctctatgcatatgcttaattca
gatgttagaaaaggttttgtgcaatgttctttgccagccaaatcaagatttcccaatcaa
atagccaagagatcaatggattcgtctcaatcggggaactcagctattgggacatgtgac
aatatggagcagcatgaagctgtgtatgtggacatgaaccagatggagttgtctccaggc
agctctccgtcctccggtgctagcaagggtgtcgataatgatagtcgtgatccaggatgc
agtgaagatattgcagggagatgcccatcaaagaaatttgccaagagaactgctgatgat
tttggcactcagggatctgatgaaggccatgatctatacagcaagaaacaaaagcaacaa
agtcaagttttgtcggagatgctccaaggttgtacaacatcagtagctgcgaatatgcag
aattctgcttctactgactctggcattaataatgggaataattttggcaaccaagtactt
gaacacgacactgcaagtttacttaacttcgtatgtgctttctgccatacttggaaaaca
acagagggtagtggacagatgcagcattttgctaatgggagagaagtttttggcagcgat
gctggtcgctctaacgtcatacatgtgcatcaaagctgcatagagtgggcacctcagatt
tattatgagaatgatactacaatgaaaaatttggataaagaactcgcaagagctggaaaa
cttaagtgcaccacttgtgggctcaagggagctgcccttggctgttatgcaaaatcctgc
cgaagaagctatcatgttacttgtgcatatgagattgcagaatgcagatgggatatgact
gattttttaatgctctgtccccatcatgcgtcacaaaagttcccaagtgagaaagtcaga
aagcctgctgttaagaagtgttcatcagctgaagtacacttggtttccagctgtaatgag
cagaaaaagttgcatgacttagatttttgggcaacatcacctaccggggctaaaaattgg
gttctgtgtggatcttccctttctgcagatgaaaagtatatgttggtcaaattcgcaaac
ttgtgtggagcaactgtgacaaaggcctggaatccaaatgttactcatgtgattgcagca
acagatgcaaatggtgcttgcagtaggacattgaaagttcttatggcaattcttagtggg
agatggatacttaaaactgattggatagaagcatgcatgaaatcaaaatgtcccatagat
gaagaaccttatgaaattagccttgataatcatgactgttctgatggcccaaaaactggc
aggctcagggttttgaataatgcaccaaagcttttcagcagcttgaaattctttttcaac
ggcaactttgtggcagcatacaaacatgaccttcaaaatctgattagagctgcgggaggt
accatccttgagagcgaacaaccactacaatattcggacaatgaaacatgtcatccgtca
accacaatagttgtttacaatggcgattcaatagaagttaacgaggtcttaaatgcggaa
aaattggcttcggaaagtggctctcaagtgattgctcatacatggatcttggattcaatt
gcttcaggtgcattgaagccctttatccattaa
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