Capsicum annuum (peppers): 107863815
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Entry
107863815 CDS
T04646
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
107863815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cann03019
]
107863815
04121 Ubiquitin system [BR:
cann04121
]
107863815
03036 Chromosome and associated proteins [BR:
cann03036
]
107863815
03400 DNA repair and recombination proteins [BR:
cann03400
]
107863815
Messenger RNA biogenesis [BR:
cann03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
107863815
Ubiquitin system [BR:
cann04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
107863815
Chromosome and associated proteins [BR:
cann03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
107863815
DNA repair and recombination proteins [BR:
cann03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
107863815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
BRCT_2
zf-HC5HC2H
zf-HC5HC2H_2
RTT107_BRCT_5
PTCB-BRCT
ELP6
Motif
Other DBs
NCBI-GeneID:
107863815
NCBI-ProteinID:
XP_016565454
LinkDB
All DBs
Position
3:complement(254667374..254677061)
Genome browser
AA seq
458 aa
AA seq
DB search
MKGQTHCKVRGEDIFHERDSKIQKKPNCGLSEMSSESHGQTLQRCPSSEIVAEHKICEYP
SVIQPKAVIDQRLLKGSVCAFCHSPKTTEKTGPFLYYANGREVGNFTSLSKVICVHSKCI
EWTPQVYYEGDIIKNLDTELSRAAKLKCSSCDLKGAALGCYVRSCRRSYHVPCAFEIQDC
RWDMDNYVMLCPIHRSVKFPGEKSKSRKHVRREVHPETSHPTTVQLSFWARSSYGPKEWV
LCGSALSSVEKYMLVKFANMCGATVCKFWKPNVTHVVTTTDEKGACTRTMKVLMAILSGK
WILTMDWVKACVAANGPVDEELYEISLDNYGSFGGPKAGRLRASANAPKLFDGFKFYLSG
DFMPTYKSDLLDLVEKAGGTIIQSKEEFVKQNYGAPQIRPPLVVYNCDPPQDCMFEESNI
LQQRLAEAEDLAKQIGCQAVQHTWILESISACELVPFC
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggccaaacgcattgcaaagttaggggtgaagacatatttcatgaaagggatagt
aagatacaaaagaaaccaaattgtggtttgtcagaaatgagctcagaaagtcatggtcaa
actctacaaagatgtcctagttctgaaattgttgccgagcataaaatatgtgaatatcct
tctgttattcagccaaaagcagttatagatcaacgtcttctgaaaggaagtgtttgtgct
ttctgtcattcgcctaagaccacagagaaaactggaccattcttgtactatgcaaatgga
agagaagtgggaaatttcacttctctttccaaagtcatatgcgtgcacagtaaatgcatt
gaatggacacctcaagtatattatgaaggagatattataaagaatttggacaccgagttg
tcaagagctgcaaaacttaagtgtagtagttgtgacttgaagggtgcagcacttggctgc
tatgtgagatcttgcaggaggagttatcatgtgccctgtgcatttgaaatccaggattgc
cggtgggatatggacaactatgtgatgctgtgcccaattcatcgatctgttaaatttccc
ggcgagaagtcaaagtccagaaagcatgtgaggagggaagtgcatccagagacttctcac
ccaaccactgtgcaattgagtttttgggcgagatcatcctatggaccgaaagaatgggtt
ctttgtgggtcagctctatcctcagtagagaagtatatgttggtgaagtttgctaacatg
tgtggtgcaactgtgtgcaagttttggaaaccaaatgtcacacatgttgttacaacaaca
gatgaaaagggtgcatgcaccagaacaatgaaagttctcatggcgattttgagtggaaaa
tggatcctaactatggactgggtaaaagcgtgtgttgcagcaaatggtccagtagatgaa
gaactttatgaaataagtctagacaattatggcagttttgggggccccaaagctggaagg
ttgagggcctcagctaatgcgccaaagctttttgatggtttcaagttttatttgagtgga
gattttatgccaacttacaaaagtgacctgttagatctagttgagaaggccggaggcact
atcattcagagcaaggaagagtttgttaaacagaactatggtgcaccgcaaattcggcca
cctctagtggtatacaactgtgatcccccgcaggattgcatgtttgaagaaagcaatatt
ttgcagcaaagattagctgaagctgaggatctagccaagcaaattggttgtcaggccgtt
cagcacacgtggattctggaatctatttctgcatgtgaactggtaccattctgctga
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