Cygnus atratus (black swan): 118247517
Help
Entry
118247517 CDS
T09349
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent translocase ABCB1-like
KO
K05659
ATP-binding cassette, subfamily B (MDR/TAP), member 4 [EC:
7.6.2.2
]
Organism
cata
Cygnus atratus (black swan)
Pathway
cata02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
118247517
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cata02000
]
118247517
Enzymes [BR:
cata01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
118247517
Transporters [BR:
cata02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
118247517
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
Rad17
RsgA_GTPase
AAA_28
AAA_16
AAA_5
AAA_29
PRK
AAA_15
DUF87
G-alpha
NACHT
AAA_19
nSTAND1
Motif
Other DBs
NCBI-GeneID:
118247517
NCBI-ProteinID:
XP_050565312
LinkDB
All DBs
Position
2:complement(22666125..22707358)
Genome browser
AA seq
1101 aa
AA seq
DB search
MGSEDETKPYINRRDDNIAVSYQDYGSECKCSEDEKKPEKLNMVSPLTLISFLFPFRYAY
YYSGIGACVLFAAYIQVSFWTLAAGRQIKRIRHEFFHAVMRQEIGWFDVNDVGELNSRIV
DDISKINEGIGEKIGMFFQAVATFFAGFIVGFTKGWKLTLVILAFSPVLGFSSAIWAKII
SAFTNKELTAYAKAGAVAEEVLAAIRTVVAFGGQRKETERYQKDLAEAKRIGIKKVISAN
ISIGIAFFLIYASYALAFWYGTTLILSDDYTIGNVFTVFSSILLGAFGVGSSAPSMEAFA
NARGAAYAIFSIIDNEPQIDSSSNAGYKPDHVKGTLEFKNVYFNYPARPDIQILKGLNLK
VNCGQTVALVGGSGCGKSTTVQLIQRFYDPKEGTIRKGRTILVIAHRLSTVRNADRIAAF
ENGVITEQGTHEELMEQKGVYYKLVNMQTSGTEDQLQEEGNAHSVSEKTLNGSVLTGQKR
QSTRNSIKRFRIQNDELDVKAVQLDKNIPPVPFLKVMALNKTEWPYFVVGTLCAIINGAL
QPIFSVIIADVIGIFVEKGKAAIRETNSMYALLFLGFGLISFVTFFLQGFTFGKAGEILT
MRLRSMTFKAILRQEISWFDEPKNSTGELITRLANDASQVKEATGSRLALIAQNVANLGT
GIILSLTYGWQLTLLLLAIVPVIAVTGMIQMKMLTGHAKKDKKELETAGKIASEAIENIR
TVVALTQERKFEFMYGQNLQVPYRSSVKKAHIFGFTFAFSQAIMYFIYAGCFRFAAYLVK
NGHMLFKDVLLXFSPFDFCGVFSAIVFGAMALGQSTSLTPNYAKAKMSAAHLFVLFERVP
SIDSYSEEGEKPKIFGGNITFKDVAFNYPTRPEVKVLQGLNIEVEKGQTLALVGSSGCGK
STVVQLLERFYDPLSGEMLLDGQNAKKLNIQWLRAQIGIVSQEPILFDCTIAENIAYGDN
SQEVSHEEIVRAAKEANIHSFIESLPKKYSTRVGDKGTQLSGGQKQRIAIARALVRQPQI
LLLDEATSALDTESKKIVQEVLDKAREGRTCIVIAHRLSTIQNADKIAVIQNGKVVEQGT
HQQLLAEKGVYYSLVNVQSRP
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atgggttctgaagacgaaacaaagccttacataaacagaagggatgataatattgctgta
tcatatcaggattatggatctgaatgtaaatgcagtgaggacgagaagaaacctgagaaa
ctgaatatggtcagtccgttaacactgatctcctttttgtttcctttcagatatgcatat
tattattctggaataggagcttgtgttcttttcgctgcctacattcaagtttcattttgg
acactagctgctggcaggcaaataaaaagaatcagacacgaattttttcatgccgtaatg
agacaggagattggatggtttgatgtaaatgatgtgggcgaactgaactctagaattgtg
gatgacatctccaagattaatgaaggaataggggaaaaaatagggatgttctttcaggca
gtggctacgttttttgctggatttatagttggttttacaaaaggctggaaattaacactt
gtgatcctggcattcagtcctgttctgggcttctcttcagctatctgggcaaagataatt
tctgcattcactaacaaagaactaactgcatatgcaaaagcaggagctgttgcagaggaa
gttctggcagcaattcgaactgtggtagcatttggaggacagaggaaagaaactgaaaga
taccaaaaagatttagcagaagccaaacgcatcggtatcaaaaaagttatttcagccaat
atttccataggtattgctttctttttgatatatgcatcatatgcattggctttctggtat
ggaaccactttgatactttctgatgactatacaatcggaaacgtctttacagtcttttct
tctatattacttggagcttttggggttggatctagtgcaccaagcatggaggcatttgcc
aatgcaagaggagctgcctatgcaatcttcagtattatagacaatgaacctcagattgac
agttcatccaatgctggctataaacctgaccatgttaaggggactttggaattcaaaaat
gtttacttcaattatcctgctaggccagatattcagatactgaaaggcttgaatctgaag
gtcaactgtggccagacagtagccctggttggtggcagtggctgtgggaaaagtacaact
gttcagctcatccagagattttacgatcccaaggaaggcacgatcaggaaaggacgcact
atacttgttattgctcaccgtttgtcaacagttcgaaatgcagatcgtatagctgctttc
gaaaatggtgtcatcacagaacaagggacacatgaggaattaatggaacagaagggagtt
tactacaaacttgttaatatgcagacatcaggaactgaagatcagttacaggaagaaggt
aatgcacacagtgtctcagaaaagacactgaatggatcagtactgactggacagaaaaga
cagtccactcggaacagcataaaacggttcagaatacagaatgatgaacttgatgtaaaa
gctgttcagcttgataaaaacatacctccagtgccatttcttaaagttatggcgttgaat
aaaactgaatggccttactttgttgttggaactctatgtgcaattatcaatggggcctta
caacccatattttcagtcataattgcagatgttatagggatatttgtagaaaaaggaaag
gctgctatcagggagacaaatagcatgtatgcactactctttttaggttttggactaatt
tcttttgtcacgttttttcttcagggtttcacatttggcaaagctggagaaatccttaca
atgaggctccgctccatgacatttaaagcaattctgagacaggagatcagctggtttgat
gaacctaaaaatagcactggagaattaattacaagacttgctaatgatgcctcacaagtg
aaagaagctacaggttccagactggcattaattgctcaaaatgtagcgaatcttgggact
gggatcattttgtcattgacctatggctggcagctgactcttctgcttttagccattgtg
ccagttattgctgtaacaggaatgattcaaatgaagatgcttactggacatgcaaaaaaa
gataaaaaggaactggaaactgcaggaaagattgcttctgaagccatagaaaatattcga
actgttgttgctttgactcaggaaagaaaatttgagtttatgtatgggcaaaatttgcaa
gtgccatacagaagttctgtaaagaaggcacatatctttggatttacttttgcgttttca
caagctattatgtactttatttatgctggatgttttaggtttgctgcatatctagtaaaa
aatggacatatgctgtttaaagatgtgcttttgtaattttctccttttgatttttgtgga
gttttttcagctattgtatttggtgcaatggcattaggacaaagcacttctttgactcca
aactatgccaaagccaagatgtcagctgctcacttgtttgtgctgtttgaaagagtaccc
tccatagacagttacagtgaggaaggggagaagcctaaaatatttggtggaaacataaca
ttcaaagatgtggcatttaactacccaacccgaccagaggtcaaagtgctccaaggcttg
aacattgaagtagaaaaaggacaaactctggctcttgttggtagcagtggttgtggtaag
agcactgttgttcagctgcttgagagattttatgatccactcagtggagaaatgctcctg
gatggccaaaatgcaaagaagctaaatatccagtggctgagagctcagatcggtatcgtc
tcccaagagccaatcctgtttgactgcactattgctgaaaacatcgcatatggagataac
agccaggaggtgtcacatgaggaaatcgttagagcagcaaaagaagccaatattcattct
ttcattgaatcactaccaaagaaatacagtacacgtgtgggagacaagggaacccagctc
tccggcggtcagaagcaacgcattgctattgcccgagctcttgtacggcagccccaaatc
ctgctgttagatgaggctacctctgctctggatacggaaagtaaaaagattgtccaggaa
gtgctggataaagccagggaaggtcgcacctgcatcgtgatagctcaccgcctgtccacc
atccagaacgctgacaagattgccgtgatccagaacggcaaggtcgtagagcaagggact
catcagcagctcctggctgaaaaaggcgtctactactctctggtcaatgttcaaagtagg
ccatga
DBGET
integrated database retrieval system
