Caenorhabditis briggsae (nematode): CBG_18318
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Entry
CBG_18318 CDS
T01054
Symbol
Cbr-rib-2
Name
(RefSeq) Protein CBR-RIB-2
KO
K02370
alpha-1,4-N-acetylglucosaminyltransferase EXTL3 [EC:
2.4.1.223
2.4.1.224
]
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
cbr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
CBG_18318 (Cbr-rib-2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cbr01003
]
CBG_18318 (Cbr-rib-2)
Enzymes [BR:
cbr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.223 glucuronosyl-galactosyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
CBG_18318 (Cbr-rib-2)
2.4.1.224 glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
CBG_18318 (Cbr-rib-2)
Glycosyltransferases [BR:
cbr01003
]
Glycan extension
O-Glycan
CBG_18318 (Cbr-rib-2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_64
Exostosin
Motif
Other DBs
NCBI-GeneID:
8584317
NCBI-ProteinID:
XP_045096444
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Position
III:5221739..5224731
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AA seq
877 aa
AA seq
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MNVIYRKNIFKKISGNKTNVQGHLQLEFVPVISMAIRLNGFRFPLSSLRVLAFLVVAVFM
ISSIFIYNSTFFEQSPTWSPQALTGRIENVDDYDAACSGYSVGRILREQKRILASVRSEL
VESQAKIEEIRAVQEELQRLIPQKQLELSALEGEIEAAQRQLEELREIQNVRVFLPYSPL
QISSSGTTHLPQSSSLNFDSVIDYSLCSITSFMPVYVEKITNGAAETEWSAVFRKVAPHL
TEESDSACIKIRITSGVLPTESVSNEILFNIGESFENDLKSIVVQSSHLRSFDFALQVNR
TTEKREPVPLLPLNRENLIGLVIGSNHKMLNLSSLEESFKPATHNRIIQKCYQEKTECGP
EITRRIYASSTFCFILESDDFLDNFMTSLEVGCVPVVLSNTQPLPFQGLIDWRRATFRLP
IARLPEAHFIVRSFENSDILEMRRMGRVYYDSYFADQDTIARSLLAALRHKLLIPTKETR
SSLRNQAKPLFNSTFTPPKGTVVNVQPNFDDEYLLGPLESRVESNSFAYNFSEFQLYSYD
TWNTIFSPHRSKEFIINSAEFPTESEFYEDTRIGFRPIEPGSGVEFSKALGGNRQREQFT
VVLLTYERDTVLVGALERLHQLPYLNKVVVVWNNIHREPPESWPSLHVPVEFIRVTENSL
NNRFVPWDRIETEAVLSLDDDIDLMQQEIVLAFRVWRENRDRIVGFPARYHARYGDAMYY
NSNHTCQMSMILTGAAFIHKVYYIELYTQPKTFFQNYLSAYTYHMPAVVREHVDSIKNCE
DIAMNFLVSHLTRKPPIKTTSRWTLKWVDNIFIISKCPTCTESLFKEDSHFDKRHECIRM
FTKIYGYNPLRFSQFRADSILFKTRLPQNHQKCFKYV
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtaatctatcggaagaacatttttaaaaaaatttcagggaataaaaccaatgtt
caagggcatctacaactcgaatttgtgccggtaatatcgatggctatccgattaaatgga
tttaggtttccattatcgtctctgcgggtgttagcgtttctggtggttgcagttttcatg
atctcatcaatttttatttataactcgacatttttcgaacaatctcctacatggagtccc
caagcacttactggaagaatcgaaaatgtagatgattatgatgcggcgtgtagtggatat
tcagtcgggagaattcttcgagaacagaaaagaatattagcatcagtccgttcggagttg
gttgagtcccaagccaaaattgaggaaatacgagccgttcaggaggagttacagagattg
atccctcaaaaacaactggaattatcagcattagaaggtgaaatcgaagctgctcaaagg
caattggaagagctgagggaaattcaaaatgtgagagtgtttttaccatactctcccctt
caaattagttcatctggcacaactcatcttccacaatcttcttccctcaacttcgacagt
gttatcgactacagcctttgttctatcacctctttcatgcctgtttatgtagaaaaaatc
acaaatggagctgcagaaacagagtggagcgctgtattccgaaaagttgctccacattta
actgaagaatccgatagcgcatgtataaagattcgaataactagtggagtacttccaacc
gaatcagttagcaatgagatcctattcaatattggagaatcatttgaaaatgacctcaag
tcgatagtagtccagtcatcacatcttcgctcatttgattttgctctacaagtcaaccgg
actacagagaaacgcgagccagttcctttgctgccactaaatcgagaaaatctaattggt
ctagtaattggaagcaatcacaagatgctgaatttatcatctttggaagaatcgttcaag
ccggcgacccataatagaatcattcaaaaatgttatcaagaaaaaaccgaatgtggacca
gaaatcacaagacggatctatgcatcatctacgttttgtttcattcttgaatctgatgac
ttcctcgataatttcatgacttcccttgaagttggatgcgttccagtcgttctgtcaaac
actcagccacttccctttcaaggattgattgactggcgacgtgccacttttagacttcct
attgctcgtcttccagaagctcatttcatcgttagatcatttgagaatagtgatattctg
gaaatgcggagaatgggaagagtttactatgactcttactttgctgatcaagatactatt
gctcgaagtttgttagcagctcttcgccacaagctgcttattccaacaaaagagacccga
tccagtctgagaaatcaagcaaaacccttgttcaattcaacattcactcctccaaagggt
actgtggtcaatgttcaacccaattttgatgatgaatatctccttggaccattggaatct
cgtgtggaatcaaattcattcgcttacaacttttctgaatttcaactatattcttacgac
acctggaacactattttctcgccacatcgttcgaaggaattcattatcaactcggcggag
tttccaacagaatcggaattctacgaagacactcgcattggcttcagacccatcgagcct
ggaagtggcgtggagttcagtaaagcgcttggagggaacagacagagagagcagttcaca
gtagtgttgctaacatatgaaagggatacggtactcgtgggagccctggagcggctgcat
caactaccgtacctgaataaagtagtggttgtctggaataatattcatcgagaaccaccg
gagagttggccgtcattgcatgttcctgtcgaattcattcgagttacggagaacagtttg
aataacagattcgtgccatgggacagaattgagacggaagctgttctatcgttggatgac
gatatcgatttgatgcaacaagaaatcgttttggcttttcgagtatggcgcgagaatcga
gatagaattgtcggctttccagctcgctatcacgctagatatggcgatgcaatgtactac
aacagcaaccatacttgtcagatgagtatgattctcacaggagcagctttcattcataaa
gtatattatattgaactatatacccaaccgaaaactttctttcagaactacttgagtgcg
tatacctatcacatgcctgcggttgttcgagaacacgtcgacagtatcaagaactgtgaa
gacatcgcaatgaactttttagtttcccatctgaccagaaaacctccaattaaaactact
tcccgatggactttaaagtgggtcgacaatatatttatcatttcgaaatgcccaacatgc
acagaaagtttgttcaaagaagattctcatttcgataaacgccatgaatgtatacggatg
ttcactaaaatttacggatacaatccactaagattttcccaatttcgcgctgactctatc
ctattcaagactcggctgcctcagaatcatcagaagtgttttaaatatgtgtaa
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