Cervus canadensis (wapiti): 122438231
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Entry
122438231 CDS
T07554
Name
(RefSeq) phosphatidylcholine translocator ABCB4 isoform X1
KO
K05659
ATP-binding cassette, subfamily B (MDR/TAP), member 4 [EC:
7.6.2.2
]
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad02010
ABC transporters
ccad04976
Bile secretion
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122438231
09150 Organismal Systems
09154 Digestive system
04976 Bile secretion
122438231
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccad02000
]
122438231
Enzymes [BR:
ccad01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
122438231
Transporters [BR:
ccad02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
122438231
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_16
Rad17
AAA_5
RsgA_GTPase
AAA
Zeta_toxin
AAA_29
AAA_21
DUF87
AAA_28
SbcC_Walker_B
AAA_30
G-alpha
APS_kinase
DUF815
AAA_15
Peptidase_MA_2
NTPase_1
Motif
Other DBs
NCBI-GeneID:
122438231
NCBI-ProteinID:
XP_043318803
LinkDB
All DBs
Position
3:30898829..30969791
Genome browser
AA seq
1275 aa
AA seq
DB search
MDPEVGRIATFRITQTREDGFELGVSSNQAKEKTKKVNLIGPLTLFRYSDWQDKLFMSFG
TIMAITHGSGLPLMMIVFGEMTDRFVNTGGNFSLPVNFSLAMLNPGRILEEEMTRYAYYY
SGLGAGVLVAAYVQVSFWTLAAGRQIKKIRQEFFHAILRQEIGWFDISDITELNTRLTDD
ISKISEGIGDKVGMFFQAIATFFAGFIVGFIRGWKLTLVIMAISPILGLSTAVWAKILSA
FSDKELAAYAKAGAVAEEALGAIRTVIAFGGQKRELERYQKHLENAKRIGIKKAISANIS
MGTAFLLIYASYALAFWYGSTLVIAKEYTIGNAITVFFSILIGAFSIGQAAPCIDAFANA
RGAAYAIFAIIDNDPTIDSFSERGHKPDNIKGNLEFKDVHFSYPARPDVKILKGLNLRVE
SGQTAALVGNSGCGKSTVVQLVQRLYDPDVGRIIIDGQDIRTFNVKYLREIIGVVSQEPV
LFATTIAENIRYGRGNVTMDEIKQAVKEANAYEFIMRLPQKFDTLVGERGVQLSGGQKQR
IAIARALVRNPKILLLDEATSALDTESEAEVQAALDKAREGRTTIVIAHRLSTIRNADVI
AGFDDGVIVEQGSHRELMKKEGVYFRLVNTQISGSQIQSEEFKVTLADEKPAMGLTHPIV
RRSLHKSLRSSRQYQNGFDVETSELDESVPPVSFLKILKLNKTEWPYLVVGTLCAVANGA
LQPAFSVIFSEMIAIFGPGDDEVKQQKCNMFSLLFLGLGIISFFTFFLQGFTFGKAGEIL
TTRLRSMAFKAMLRQDMSWFDDHKNSTGALSTRLAMDASQVQGATGTRLALIAQNTANLG
TGIIIAFIYGWQLTLLLLSVVPIIAVSGIVEMKLLAGNAKRDKKELETAGKIATEAIENI
RTVVSLTQERKFESMYVEKLYGAYRNSVRKAHVYGISFSISQAFMYFSYAGCFRFGAYLI
VNGHMRFRDVILVFSAIVLGAVALGHASSFAPDYAKAKLSAAHLFKLFERQPLIDSHSEE
GLRPDKFEGNVTLNEVVFSYPSRPNVPVLRGLSLEVKKGQTLALVGSSGCGKSTVVQLLE
RFYDPLAGTVLLDGHEAKKLNIQWLRAQLGIVSQEPILFDCSIADNIAYGDNSRPVTMPE
IVSAAKAANIHPFIETLPHKYETRVGDKGTQLSGGQKQRIAIARALVRHPRILLLDEATS
ALDTESEKIVQEALDNAREGRTCIVIAHRLSTIQNADLIVVIENGRVREQGTHQQLLAQR
GIYFTMVSVQAGTEN
NT seq
3828 nt
NT seq
+upstream
nt +downstream
nt
atggatccagaggtgggaaggatcgcaacattccggatcacccagacgagggaggacgga
tttgaactgggtgtcagcagcaaccaagctaaggaaaaaacgaagaaagtaaatttgatt
ggaccgttaacattgtttcgatactctgattggcaggataaattatttatgtcttttggc
actatcatggccataactcatggatcaggtctgcccctcatgatgatagtatttggagaa
atgactgacagatttgttaatactggaggaaatttctcccttccagtgaatttttcactg
gcaatgctaaatccaggcagaattctggaagaagaaatgactagatatgcatattattat
tcaggattaggtgctggagttcttgttgctgcctatgtacaggtttcattttggactttg
gcagctggccgacagataaagaaaattagacaagagttttttcatgctattctacgacag
gaaataggctggtttgacatcagtgacatcactgaactcaatacacggctaacagatgac
atctccaaaatcagtgaaggaattggtgacaaggttggaatgttctttcaagcaatagcc
acgttttttgcaggattcatagtggggtttatcagaggatggaagctcactcttgtgata
atggccatcagccctatcctgggactctctacagctgtttgggcaaagatactctcagcg
tttagtgacaaagaactggctgcatacgcaaaagcaggtgccgtggcggaagaagctctg
ggggccatcaggactgtgatcgcttttgggggccagaagagagagctggagaggtatcag
aaacatctagaaaatgccaaaaggattggaattaaaaaagctatttcagcgaacatttct
atgggcactgccttcctgctaatatatgcatcgtatgcactggccttctggtatggatcc
actctagttatagccaaagaatacactattggaaatgcaattacagtctttttctcaatc
ctgatcggcgccttcagcattggacaggcggctccctgtattgatgcttttgccaatgca
agaggagcagcatatgcgatctttgctattattgataatgatcctacaattgacagtttt
tcagagagaggacacaaaccagacaacatcaaagggaatttggagttcaaagatgttcat
ttctcttatcctgctcggccggatgtcaagatcttgaagggcctcaacctgagggtagag
agcgggcagacggcggccctggttgggaacagcggctgtgggaagagcacagtagtccag
ctggtgcagaggctgtacgaccctgacgtggggcggattatcatcgatgggcaggatatt
aggacatttaatgtaaagtatctgagggaaataattggagtggtgagtcaggagccagtg
ctctttgccaccaccattgctgaaaatatccgttacggccgtggaaatgtcaccatggat
gaaataaagcaagctgtgaaggaagccaacgcctatgagtttatcatgagattaccacag
aaatttgacaccctggttggagagagaggggtccagctgagcggtggacagaagcagaga
atcgccatcgcccgggcgctggttcgcaaccccaagatcctgctgctggacgaggccacc
tcagcgctggacacggagagtgaagccgaggttcaggcggccctggataaggccagggaa
ggccggaccaccatagtgatagcccaccggctgtctacgatccggaatgcagatgtcatc
gctgggtttgacgacggagtcattgtggagcaaggaagccacagagaactaatgaagaag
gaaggggtgtacttcaggctggtaaacacgcagatttcaggaagccagatccagtcagaa
gaatttaaagtcacacttgctgatgaaaagcctgccatgggtttgactcatcccatagtt
aggcgttctcttcataaaagcctgaggagttcacgacagtatcagaacggctttgatgtg
gaaaccagtgaacttgatgaatctgtgccaccggtgtcttttctgaagatcctgaaactg
aacaagacagagtggccctacttagtggtgggaacgctgtgcgccgttgccaacggggcg
ctccagccggccttctcggtcatcttctcggaaatgatagcgatttttggaccaggagac
gatgaagtgaagcagcagaaatgcaacatgttctcattgcttttcttaggcctgggaatt
atttccttttttactttcttccttcagggcttcacgtttgggaaggctggtgagatcctc
accacgaggctacggtcaatggcttttaaagcgatgttgagacaggacatgagctggttt
gatgatcataaaaacagtactggtgcactttctacaagacttgcaatggatgcctcgcaa
gtccaaggggccactgggaccaggttggctctgattgcacagaatacggctaaccttgga
actggtattatcatagcattcatctacggttggcaattaacccttttgctgttatcggtt
gttccaattattgctgtatcaggaattgttgaaatgaaattgctggctggaaatgccaaa
agagataaaaaggaactggaaactgctggaaagattgcaacagaggcaatagaaaatatt
aggacagtcgtgtccttgacccaggaaagaaaatttgaatccatgtatgttgaaaaattg
tatggagcttacaggaattctgtgcggaaggcacatgtctatgggattagttttagtatt
tcacaagcatttatgtatttttcctatgctggttgttttcgatttggtgcctatctcatc
gtaaatggacacatgcgcttcagagatgttattctggtgttctcagcgattgtgttgggc
gccgtggctctaggacatgctagttccttcgctccagactatgctaaagccaagctgtct
gcagcccacttattcaagctgtttgaaagacaacccttgattgacagccacagtgaggaa
ggcctgaggcccgataagtttgaagggaatgtgacacttaatgaagtcgtgttcagctac
cccagccggccaaacgtgcctgtgcttcgggggctgagcctggaggtgaagaagggccag
acgctggccctggtgggcagcagcggctgcgggaagagcacggtcgtccagctcctggag
cggttctatgatcccttggctggcacagtgctcctagatggtcacgaagcaaagaagctc
aacatccagtggctcagagcccaacttggaattgtgtcccaggagcccatcctgtttgat
tgcagcattgccgacaacatcgcctatggggacaacagccggcctgtaaccatgcctgaa
attgtgagcgcagccaaagcagccaacatccatcctttcattgagaccttgccccacaaa
tatgaaacaagagtgggagacaaggggactcagctttccgggggacagaaacagaggatt
gctattgcccgagccctcgtccgacacccccgcatcctactgctggatgaagctacatca
gcgctggacactgaaagtgagaagattgtccaagaagccctggacaacgcccgagaaggc
cgcacctgcatcgtgatcgctcaccgcctgtccaccatccagaacgcagacttgatagtg
gtgattgagaatggcagggtcagggagcagggcacgcaccagcagctgctggcacagcga
ggcatctacttcaccatggtcagcgtccaggctgggacagagaactga
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integrated database retrieval system
