Ceratitis capitata (Mediterranean fruit fly): 101454693
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Entry
101454693 CDS
T07533
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
ccat
Ceratitis capitata (Mediterranean fruit fly)
Brite
KEGG Orthology (KO) [BR:
ccat00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccat01009
]
101454693
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccat03019
]
101454693
04131 Membrane trafficking [BR:
ccat04131
]
101454693
03036 Chromosome and associated proteins [BR:
ccat03036
]
101454693
Enzymes [BR:
ccat01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
101454693
Protein phosphatases and associated proteins [BR:
ccat01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
101454693
Messenger RNA biogenesis [BR:
ccat03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
101454693
Membrane trafficking [BR:
ccat04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
101454693
Chromosome and associated proteins [BR:
ccat03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
101454693
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
PagP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
101454693
NCBI-ProteinID:
XP_004529653
LinkDB
All DBs
Position
Unknown
AA seq
1090 aa
AA seq
DB search
MSSPIVTRRGAQKSKIQTRAMVKSAVTASKPSAALLEAKRKAKLLKMQEQSQQDQVVKDI
FQNAVTAKTMLLKPTGIVYDESMALHRCLWDDNHPERPERFTRVLERCKELQLIDQCQRI
PSRRATKEEVLLLHSAEHYALLQQTSGVHDEPAMEDFSSRFDSVYIHPSTFELSLLATGS
TIDLIENIIRGNVQNGMAIIRPPGHHAMKAEFNGYCFFNNVAIATQYALDILKLSKIMIV
DWDIHHGQGTQRFFYNDPRVLYFSIHRFEHGKFWPNLKESDFDAIGYGNGLGYNFNVPLN
KTKMGNGDYLAIFQQLVIPVAVEYQPELIIISAGYDAALGCPEGEMEVTPAFYPHLLNSL
MKLTQSRIAVVLEGGYCLDSLSEGAALTLRTLLGGTCPTLVEKLEPPCDVLQDTILNCIY
AHRQYWRCLQIQPMYTMEELNNVNPQPKLHKVSRLFIGGEPLPERFPTRGTAPITIPEVV
AQNEKRLKYLKSATKLLAPKVRVCYVYDEQMLQHSNTFEEGHPEQPERIKRIYEMHTDYK
LTERMQQLPIRIATTDEICLAHTRAHVNFIRRISDKDELQGMGEKYNSVYFHPKTFDCAT
LAAGSVLQVVDKVLKGEARSGVCIVRPPGHHAEPDVPHGFCIFNNVAIAAQYAIRDHGLK
RVLIVDWDVHHGNGTQHIFETQSNVLYISIHRYDNGTFFPKSKDADYDVVGKGAGVGFNV
NIPWNKKGMGDLEYVMAFQQLVMPIAYEFDPELVLVSAGFDAAIGDPLGGCKVTPEAYGL
FTHWLSALAGGRIILCLEGGYNVHSISYAMTMCTKSLLGDPIPPIQVNGNMARGLSAAYM
SCVETIQNCLNIQQRYWKSLVFNKRLPQSAGENNNEDFLSATMKNLDITTVESKGVIGCE
NVADTAVALEPSGSKPKVKVKTLTEFISENLEALQNNEMFAVVPLKTCPHLKQLRPEEAP
KTIDSNAPCELCSSAVENWICLSCYKILCGRYVMEHMLMHSLETTHPLALSFSDLSVWCY
LCEAYVDNSKLHVFKNLLHRHKFGEDMVWSYPDTKCNNNNGRPDGDSNRDDDDDDCDDTH
VFSIQLEDGN
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atgagctctccaattgttactcgccgcggtgcgcaaaaatctaaaatacaaactcgtgca
atggttaagtctgcagtcacagcaagcaagccgagcgcagcactactcgaagctaaacgc
aaagctaaattacttaagatgcaagaacaaagtcaacaggatcaagtggtgaaggatatc
tttcaaaatgcggtaactgcaaaaacaatgttactaaaaccgactggcatcgtttatgat
gagtcgatggcactgcatcgttgtctttgggatgataatcatccagagaggccagaacgt
tttacacgtgtgttggagagatgtaaagaattacaattaatagaccaatgtcaaagaata
ccatcacgtcgtgcaacaaaggaggaggtgcttctcttacacagcgccgaacactatgca
cttctccaacagacatccggtgtgcacgatgagccggccatggaagatttcagttcacgt
tttgattcagtttatatacatccgtccacatttgagctgtccctattggctaccggttcg
acgattgacttaattgagaacataattaggggcaatgtacaaaatggcatggcaattata
cgaccacccggtcatcatgcaatgaaggctgaatttaatggttactgtttcttcaacaat
gtggccattgcaacacaatacgctttggacattttgaagttaagcaagataatgattgtc
gattgggatatacatcatggacagggtacgcaacgattcttctataatgatccgagagta
ctgtacttctctatacaccgttttgaacatggcaaattttggccaaatttgaaagaatcg
gattttgatgccatcggctatggcaatggtttgggttataattttaatgtacctttgaat
aagactaaaatgggtaatggtgattatttggcaatattccaacaattggtcatacctgtt
gcagtggaatatcaaccggaattgataattatttcggctggttatgatgctgctttaggc
tgtccggagggtgaaatggaggtgactcccgcattttatccacatttattgaattcatta
atgaaattaacacaatcacgtatcgccgttgtgcttgagggtggctactgcctggattct
ttgtccgagggtgcagcgttgacattacgcacactacttggcggcacatgcccaacgctg
gtagagaaattagagccaccgtgcgatgtactgcaagatacaatactcaattgcatttat
gcacatcgtcagtactggcgttgcttgcaaattcaaccaatgtatactatggaagagcta
aataatgttaatccacagccaaagttgcataaagtcagtcgactgttcattggcggagag
ccattgccggaacgttttcccactagaggcacagcgccgatcacaataccggaagtagtg
gcgcaaaatgagaagcggttgaaatatcttaaaagtgcaaccaaattattagcaccaaaa
gtacgcgtttgctatgtttacgacgaacagatgctgcaacacagtaataccttcgaggag
ggccatcccgaacagccggagcgtattaagcgcatctatgaaatgcacaccgattacaaa
ctcaccgaacgcatgcaacaattgcccatacgcatagcaacaacagatgagatttgcttg
gcgcatactcgtgcgcatgtcaactttatacggcgcataagcgataaggatgagctacag
ggcatgggtgagaaatacaattctgtttacttccatccgaaaacattcgattgtgccaca
ttggcagcgggttcggtgttgcaggtggttgataaagtgcttaaaggcgaagcacgcagt
ggtgtgtgtattgtgcgcccgccaggccaccatgcagagccggatgtgccacatggtttt
tgcattttcaataatgttgccatcgccgcgcaatatgctatacgagatcatggacttaag
agggttttaatcgttgactgggatgtgcatcatggtaatggcacacagcatattttcgaa
acccaatcaaatgtgctctacattagcatacatcgctatgataacggtacattctttcct
aaaagtaaagacgctgactacgatgttgttggcaaaggtgcaggtgttggttttaatgtc
aatataccatggaataagaagggcatgggcgatttggaatatgttatggccttccagcag
ctcgtcatgccaatcgcttacgaattcgatccagaattggtattggtctcagctggtttt
gatgctgcaattggtgatcctctcggcggctgtaaagtaacacccgaagcatatggtctc
ttcacacactggctttcggctttagccggtggccgcatcatactgtgtttagaaggaggc
tacaatgttcactcaatatcctacgccatgactatgtgcacaaaatctctacttggcgat
ccaataccacctatacaagttaacggtaatatggcgcgtggacttagcgcggcgtatatg
agttgcgtggagacaattcaaaattgtttgaatattcagcagcgttactggaagagtttg
gtcttcaacaagcggttgccacaatccgcaggcgaaaataataatgaggattttctttct
gctactatgaaaaatttagatatcacaacggttgagtcgaaaggcgttattggctgtgaa
aatgtcgccgatacggcagtggcattggaaccgagcggcagcaagccgaaggtaaaagtt
aaaacactaaccgaatttatcagcgaaaatttagaggctttgcaaaataacgaaatgttc
gccgttgttccattaaaaacatgtcctcatttaaaacagttgcgtcccgaggaggcgccg
aaaaccatagacagtaatgcaccttgcgagctgtgctcatcagcggtcgagaactggata
tgtctgagctgttacaaaatactctgcggtcgttatgttatggagcatatgcttatgcat
agccttgagacaacacatcccttggctttgagttttagtgatttgtcggtttggtgttat
ctctgtgaggcatatgtagataatagtaaattgcatgtatttaaaaatctattacatcgg
cataaatttggtgaagatatggtgtggtcatatccagatacaaaatgcaataacaataat
ggccggcctgatggtgacagtaatagagatgatgacgatgacgattgtgatgatacacat
gtatttagcatacaacttgaagatggcaactga
DBGET
integrated database retrieval system
