KEGG   Coregonus clupeaformis (lake whitefish): 121573262
Entry
121573262         CDS       T08357                                 
Name
(RefSeq) DNA polymerase beta-like
  KO
K02330  DNA polymerase beta [EC:2.7.7.7 4.2.99.-]
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    121573262
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cclu03400]
    121573262
Enzymes [BR:cclu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     121573262
DNA repair and recombination proteins [BR:cclu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     121573262
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    X-family DNA polymerases
     121573262
Motif
Pfam: DNA_pol_B_palm DNA_pol_B_thumb DNA_pol_lambd_f HHH_8 HHH_5 Cactin_mid HHH_2 DUF4806 Cdd1 NTP_transf_2
Other DBs
NCBI-GeneID: 121573262
NCBI-ProteinID: XP_041741058
LinkDB
Position
18:54022294..54030932
AA seq 336 aa
MSKRKAPQESPNEGITDFLTELANYERNVNRAIHKYNVYRKAASVISKYPQKIKNGEEAK
KLEGVGKEIAKKIDEFLQTGTLKKLEKIRNDDTSSSINFLTRVTGIGPAAARKFFDEGVK
TLEDLKKIEHKLNHHQQIGLKYFEEFEKRIPRAEMTKMETFILQELELLDTEYIGTICGS
YRRGAESSGDIDILLTHPNYTSVDEKQPKLLHAVVEHFESIGFITDTLSKGDTKFMGVCQ
LQQNDEDGEEYLHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRTHALEKGFTLNEYTIR
PVGVTGMAGEPLMVDSEKDIFDYIQWKYKEPKERSE
NT seq 1011 nt   +upstreamnt  +downstreamnt
atgagtaaaaggaaagcgccacaggaatccccaaacgagggaataacagactttcttaca
gaattggccaactatgagaggaatgtcaacagagctatccacaagtacaacgtctacagg
aaagccgcttcagtgatctccaagtacccccagaagatcaaaaatggggaggaggccaag
aaactggagggagttggaaaagagatcgctaagaagatagatgagtttttacaaacagga
acactcaagaagttggaaaagattcgtaatgatgacaccagctcatccatcaacttcctt
accagagttactggtattggtccggctgctgccagaaagttttttgatgagggagtgaag
accctggaagatctgaagaaaattgaacacaagctcaatcatcatcagcagattggactc
aagtactttgaggagtttgagaagaggattccacgagctgagatgacgaagatggagacc
ttcattctgcaggagctggagttgctggatactgagtacatcgggaccatctgtggaagc
tacaggagaggtgctgaatccagtggggatattgatatcttgttgacccacccaaactac
acctctgtggatgagaaacagcccaaacttctccatgccgtggtggaacattttgagtcc
attgggttcattacagacacactgtccaaaggagacaccaaattcatgggagtctgccag
ctgcagcaaaatgatgaagacggggaggaatatcttcacaggcgcattgatatcaggtta
attcctaaggaccagtattactgtggtgtgctgtatttcactggcagtgacatcttcaat
aagaacatgagaactcacgctctggagaaaggcttcactctcaacgagtacaccatccgg
ccagtgggggtcactggtatggccggagagcctctgatggtggacagtgagaaggacatc
tttgactacatccagtggaaatacaaagagcccaaagagcgcagcgagtga

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