Colias croceus (clouded yellow): 123694805
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Entry
123694805 CDS
T08651
Name
(RefSeq) histone deacetylase 6
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
ccrc
Colias croceus (clouded yellow)
Brite
KEGG Orthology (KO) [BR:
ccrc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccrc01009
]
123694805
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccrc03019
]
123694805
04131 Membrane trafficking [BR:
ccrc04131
]
123694805
03036 Chromosome and associated proteins [BR:
ccrc03036
]
123694805
Enzymes [BR:
ccrc01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
123694805
Protein phosphatases and associated proteins [BR:
ccrc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
123694805
Messenger RNA biogenesis [BR:
ccrc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
123694805
Membrane trafficking [BR:
ccrc04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
123694805
Chromosome and associated proteins [BR:
ccrc03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
123694805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
STAT_int
Motif
Other DBs
NCBI-GeneID:
123694805
NCBI-ProteinID:
XP_045496333
EnsemblRapid:
ENSCEUG00000004944
LinkDB
All DBs
Position
1:2591596..2611664
Genome browser
AA seq
1067 aa
AA seq
DB search
MSSPPPLPTRHSNGDNKKTPPLSNIVTRNGARKAKIQTRARSAGTVKASASVITAKRKAQ
QKKKSTIETVLRDHYQITMESKTKVKGPTGFVTEPRMVEHKCLWDDNYPENPERLISVIK
RCVELKLIEQCKEICPRPATEEEIYELHDTSVYEMLEKTHKNNNLEYLEELSSRFDAVYI
HPSTHELSLLAAGSTIELVDNILRGEVQNGAAFIRPPGHHAMRAEPCGYCFYNNVAIAAK
YAMKKYDLNRILIVDWDVHHGQATQQMFYDDPRVVYFSVHRYEHGAFWPNLRQSNFDYIG
SGKGEGFNFNVPLNKTGMKDADYLAIWDQLLLPMAFEFQPELILISAGYDAAIGCPEGEM
QVTPACYATLTHALMGVCPRVGVVLEGGYCLASLAEGAALTLRTLLGHPPPMLETLSEPC
DSIRESILNCIYAHRKHWRCFNYQPTYSIDTSIKNVCDVDKEKHTVVVRWEGDETKPEKY
ETRNCYPVQDSATKRQIMERLEHLKMVTDLKLAQHPVCYIYDEAMLKHFNICEPGHVECP
QRILRIHERHMDFGLLDRVHVLSGARATDRDILAVHSAEHLQRLKDLSSMKLRDLNSKKD
TYDSVYFHPDSLESAAVAAGCVIKMVDAVLSGIAGSGVCVVRPPGHHADSSTPSGFCLLN
NVAAGARHAGRRARRVLLLDWDVHHGNGTQAVTCGEHRILYMSLHRYDNGAFFPHSKAAN
YTAVGEGKGEGFNVNIPWNKRGMGDAEYLAAFTQVVMPIAREYNPDLVLVSAGFDACVGD
PLGGCKVTPECYGLMTHMLRSLAGGRVILCLEGGYNVTSISYAMVMCTKALLGDPIQLHY
DPKVTCHWSAQESINDVIRVHKKYWKNLKFQIALPMEDVLEHSKAKVADNAWDMSIEDGF
ANLSLDKKCSDGIHCGTDDEDNACSSKETKTLVDFLSENMQAIVDGEMFAVVPLPGCPHL
DSLYAIPGNVKFEQGVKCVDCEHTVENWVCLQCYITACGRHINGHMSAHYNTTQHPLSLS
LADLSVWCYPCDAYIDNPLLYDAKNNAHRCKFGEDMPWCYRDGVQMQ
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcaccgccgccgcttccaacccgtcattccaacggagacaataagaagacaccc
cctttatcaaatattgtgaccagaaatggcgcaaggaaggcaaaaatacaaacacgtgca
agatcggccggaactgttaaagcttcggcgtctgtaattacagcaaaacgaaaggcacag
caaaagaaaaaatctacaatagaaactgttttgagggaccattatcaaattacaatggaa
tcaaagacaaaggttaaggggccgactggttttgtcactgagccacggatggtggaacac
aaatgtctctgggatgacaattatccagagaatcctgaacgacttatcagtgttattaaa
aggtgtgttgaattgaagttaatagaacaatgtaaagaaatatgtccaaggcctgcgacc
gaggaagagatttacgaattgcatgatacctcagtgtatgagatgttagagaaaactcac
aagaataacaatttggagtatttggaagaactatcttcgagatttgatgcagtctacatt
catccaagcacccacgagctatccctcctagcggcgggatccacaatagagctagtagac
aacatactaaggggcgaagtccaaaacggggctgcgttcatccggccgccgggacaccac
gcgatgagggcggagccctgcggctactgcttctataataacgtggccatagctgctaaa
tatgctatgaagaagtatgatttgaataggatacttatagtggactgggatgttcatcat
ggccaagcaactcagcagatgttctatgatgatccaagggtggtatatttctcggttcac
cgttacgagcatggtgccttctggcccaacttaagacagtctaatttcgactacatcggt
tcaggcaaaggagaaggtttcaacttcaacgtgcctctcaataagactgggatgaaagac
gctgattatctcgcgatttgggatcaactgctgttgccgatggcttttgagttccaaccg
gagctgatcctcatctctgcgggctacgacgctgcgatcggctgcccggagggcgagatg
caagtaacgccagcatgctacgccactttaacccacgcactcatgggcgtgtgcccacgt
gtgggcgtggtactagaaggcgggtattgtcttgcgtcacttgctgaaggagcggcttta
acactacgcactttgttgggacacccgcctcctatgttggagacacttagtgaaccttgt
gactcaatccgcgaatcgatcctcaattgcatatacgcacatcgaaaacactggcgttgt
ttcaactaccaacccacatatagtatagacacaagtatcaagaacgtttgcgatgtagac
aaagagaaacatacggttgtagtgaggtgggagggagatgaaactaaaccggagaaatac
gaaaccaggaactgttatccggtacaagatagtgcgacgaaacgacagataatggaacga
ttggagcatttgaaaatggtaacggatttgaagttggcacagcatcccgtttgttatatt
tatgatgaagctatgttgaagcattttaacatctgcgaacccggtcacgtggaatgcccg
cagcggatactgcgtatacacgaacggcacatggactttggactattggatcgcgtgcac
gtgctatccggggcgcgggcaaccgaccgggacatacttgccgtgcattctgctgaacat
ttacagaggttaaaagacttatcatctatgaagctccgcgacctcaacagcaagaaggac
acatacgattccgtatacttccatcctgactcgctggaaagcgctgcagttgcagctggc
tgtgttatcaagatggtggacgcggtgctatccgggatcgccgggtcgggcgtgtgcgtg
gtgcggccaccgggccaccacgcggacagcagcacgccgagcgggttctgcctgctgaac
aacgtggcggcgggcgcgcggcacgcggggcgccgcgcccgccgcgtgctgctgctcgac
tgggacgtgcaccacgggaacggcacgcaggccgtcacgtgcggggagcataggatcctg
tacatgtcgcttcaccgctacgataacggtgcattcttcccgcactctaaagctgcaaac
tatacagcggtgggggaggggaagggagagggattcaacgttaatattccgtggaataag
cgaggcatgggcgacgcggagtacttggcagcgttcacgcaggtcgtgatgccgatagcg
agagaatataacccggacctcgtgctcgtgtccgccgggttcgatgcctgtgtgggggat
ccgttgggaggttgcaaagtgactcccgaatgttatggtctcatgacgcacatgctacgt
agtttggccggcggacgtgttatattatgcctagaaggcggatataacgtcacaagcatc
tcctacgctatggtcatgtgtactaaagcccttctaggagaccccatccaactgcactac
gaccccaaagtaacctgccattggtcggcccaagaatccataaatgacgttatcagagtg
cacaaaaagtactggaagaacctaaagtttcaaattgcgctgccgatggaggacgttcta
gaacattccaaggcgaaagtcgctgataatgcgtgggatatgtcgatagaagatggtttc
gcgaatttgagcttagataaaaaatgttcagatggtattcactgtgggacagacgatgaa
gataatgcgtgtagttcgaaggaaactaagactctagtggatttcttgtcggagaatatg
caagcgatagttgatggggagatgtttgcggttgtccctttacctggttgtccacatttg
gatagtttatatgcgataccgggtaatgtgaaatttgagcaaggagttaagtgcgtggat
tgtgaacatacggtcgagaattgggtgtgcctccaatgttatattacagcatgcggacgt
cacatcaacgggcacatgtcagcccactacaacacaacacagcacccgctatcgctctca
ctcgcggatctctcagtgtggtgctacccttgtgacgcgtacatagacaatccgctgcta
tacgacgctaagaacaacgcacacaggtgcaagttcggcgaggatatgccctggtgttat
agggatggagtacagatgcagtga
DBGET
integrated database retrieval system
