Chrysoperla carnea: 123302324
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Entry
123302324 CDS
T09255
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
ccrn
Chrysoperla carnea
Brite
KEGG Orthology (KO) [BR:
ccrn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccrn01009
]
123302324
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccrn03019
]
123302324
04131 Membrane trafficking [BR:
ccrn04131
]
123302324
03036 Chromosome and associated proteins [BR:
ccrn03036
]
123302324
Enzymes [BR:
ccrn01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
123302324
Protein phosphatases and associated proteins [BR:
ccrn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
123302324
Messenger RNA biogenesis [BR:
ccrn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
123302324
Membrane trafficking [BR:
ccrn04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
123302324
Chromosome and associated proteins [BR:
ccrn03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
123302324
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
Motif
Other DBs
NCBI-GeneID:
123302324
NCBI-ProteinID:
XP_044741140
LinkDB
All DBs
Position
X:complement(15990248..16043799)
Genome browser
AA seq
1024 aa
AA seq
DB search
MHYRTGDFELDFNTVAIPDNVCEAIRTNFKQRKEFTITEAQPSDVTETPAKSEDGGSANT
DVNKPVIKKGNSLADIKKRARENKGGKNITIEIYDPYEKSAGSINSIRKSTGLITNIDES
DSHECIWDSNYPENPFRLSSVIRRFEEYQLYDRCEILTSREATKEEILVAHSEKAYTLLE
TYANSGINAEGYETVSSLYDAIFINENTARAAKFAAGSCIELVDAILSNKVQNGFAAIRP
PGHHAMYNEYNGYCFFNNAVIAARHAINKFGTKRILIVDFDVHHGQGTQDQFYESKNVLY
FSIHRYEYGRFWPNLRRSDFDYIGEGAGTGYNFNVPLNETGMTDADYLTIFNTVLMPVAY
EYDPELVIISAGYDASIGCPEGEMKVTPQCYAHMTHLLQAFAQGKVAVLLEGGYNPTSLA
EGAALTLRALLDDPVPHLPHPNLKPKHSLLKTIRNLILHQKPFWKCFHYYTGSPPTPVYT
EVYTKKPVNYPTRDAYPKVPQGVKGLQIRLDILETITPNIKSYLKLPTFKLMILYDEEML
EHRARDNVAQLECPERIKNSFELLKKFGLLGRAVHILGTKLEILNELYKVHPPEYITRLE
NVIAKEDDKQFTSIFTNSKTIDCALMAVGSGLNLLDRIMAGDCSTALALIRPPGHHAEPK
EAMGFCFFNNVAVTARHALDHFKLKRVLIVDFDIHHPNGTYTIFKNDNRCLLISIHRYHA
NFFPHTGALTECGEGEGIGFNVNIPWTKKGQGDNEYLAAFLRIILPIARQFDPELVLVSA
GFDAAVGDPLGQCNVSPEMFGHMAHMLKEVSESRLLFFLEGGYNVTSVSHSVGMVAKALL
GDPLVSVSPKTFINEDAEQVIESVIKHQLKYWPILNVNPDISTPESITKTDHVKEHTTIY
DNLFSAMIPVQTPYNTIRECMHVYNLESSTSQYEPKDGVDTKITCADCTFFGNKRYECLT
CSYVGCPDQINGHTRKHAFLFGHPLVISYEDYSIYCFSCKRFLSSSDLSDYREQVMMKTI
EDRN
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atgcattatagaacgggagattttgaacttgattttaacacggtagcaatacccgataat
gtttgtgaggcgatacgtacgaattttaaacaacgaaaagaatttactattactgaagcc
caaccatcagatgtgacggaaacaccggcgaaatctgaagacggtggatctgcgaatact
gatgtgaacaaacctgttataaagaaagggaatagtttggccgatatcaagaaacgtgcc
cgagaaaataagggaggcaaaaatatcaccattgaaatatacgatccctatgaaaaatca
gccggttccataaactctatacggaaatcaactggtctaattacaaatattgacgagtcg
gattcgcatgaatgtatatgggattcaaattatccagaaaatccatttaggctttctagc
gtcattcgcagattcgaagaatatcaattgtatgatcgttgtgaaattttaacatcaagg
gaagccacaaaagaggaaattcttgttgcgcacagtgaaaaagcatatactttattagaa
acttatgctaattctggaatcaatgcagagggatacgaaacagtatcttcgttatatgat
gcgattttcattaatgagaatacggcacgggcggcaaaatttgcagcaggatcctgtatt
gaattggttgatgcaattttatcaaataaagtacagaatggttttgcggccataaggccg
ccagggcatcatgcaatgtataacgaatacaatggctattgtttctttaataatgctgta
attgctgcaaggcatgcgattaataaatttggaacgaaacgtatattgattgttgatttc
gatgttcatcatggacaaggaacccaggatcaattttacgaatctaagaatgtattatat
ttttcaattcatcgatacgaatatggacgtttctggccaaatttacgtcgatctgacttt
gattacattggagagggtgcaggtactggatataattttaacgttccattaaacgagact
ggaatgacagatgctgattacttaaccatctttaatactgtgttaatgccagtggcctac
gagtatgatcctgaattggttataatatccgctggttacgatgcatccatcggttgtcca
gagggtgagatgaaagtgacgccgcaatgctacgcacatatgacgcatttattacaagct
tttgctcagggcaaagttgctgtactcctcgaaggtggctacaatcctacttcgttggct
gaaggtgccgcacttacattaagagcattactggatgaccctgttcctcatctacctcat
cccaatttaaaacccaaacacagcctacttaaaacaatacgaaatctaattttacatcag
aaaccattttggaaatgtttccattactatacgggtagtcctcctactccagtttataca
gaagtatatacaaaaaaaccggtcaattatcctacccgtgacgcttatccaaaagttcca
caaggagttaaaggacttcaaatacgtctagatatattggaaacaattacgccaaatata
aaatcgtatttaaaacttcccacctttaaattaatgattttgtacgatgaagaaatgttg
gaacatcgtgcgagagataacgttgcgcaattagaatgtccagagcgaattaaaaattca
tttgaattgttaaaaaaatttggtcttcttggtagggccgtacatattttgggcacaaaa
cttgaaattctcaacgaactttacaaagtacatcctccagaatatattactagattagaa
aacgtaattgcaaaagaggatgacaaacaatttacctcaatttttacaaattccaagacg
atagactgtgccttaatggccgttggatctggattgaatttattggatcgtataatggct
ggagattgttcaacagctcttgcactaattcgcccacctggacatcatgctgaaccaaaa
gaggcaatgggattttgttttttcaataatgttgccgttactgcccggcatgctttggac
cattttaaattgaaacgtgttttaattgtcgatttcgatatacatcatccaaacggcacc
tatacaatattcaaaaacgataatagatgtttattaataagtattcatcgttaccatgca
aatttcttcccacatacaggagcattaaccgaatgcggtgaaggtgaaggtattggtttt
aacgtaaatataccatggacaaaaaaaggtcaaggtgataatgaatacctagccgcattt
ctccgtatcatcttaccgattgcacgacaatttgatccagaattagtattagtatcggct
ggtttcgatgccgcagttggtgatccactaggccagtgtaacgtgtcgcctgagatgttc
ggtcatatggcccatatgctcaaggaagtttctgaatcaaggcttttattctttttggaa
ggtggttataatgtgacatcagtatcgcatagtgttggaatggtagcaaaagctttacta
ggagatcctttggtatcagtttcaccaaaaacgtttattaatgaagatgctgaacaggtg
atcgaaagcgtgataaaacatcagctcaaatattggcctattttgaatgtaaaccctgat
atatctacgccagaatcaataacaaaaacagatcatgtcaaggagcatacaaccatttat
gataatctgttttcagcgatgatacctgtacaaacgccttacaacacaatacgtgaatgt
atgcatgtctataatttagaatcatctacgtcacaatacgaaccaaaggatggggtagat
actaaaataacctgcgccgattgtacattttttggtaataaaagatatgaatgtctaacc
tgttcttacgtgggatgccctgatcaaataaacggtcacacccgtaaacatgcattttta
tttggtcatccattagtgatcagttacgaggattattccatctattgttttagttgtaaa
cgatttttatctagctcagatttatctgactaccgagaacaagtaatgatgaaaactatt
gaagatagaaactaa
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