Cotesia glomerata: 123262100
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Entry
123262100 CDS
T07738
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
cglo
Cotesia glomerata
Brite
KEGG Orthology (KO) [BR:
cglo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cglo01009
]
123262100
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cglo03019
]
123262100
04131 Membrane trafficking [BR:
cglo04131
]
123262100
03036 Chromosome and associated proteins [BR:
cglo03036
]
123262100
Enzymes [BR:
cglo01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
123262100
Protein phosphatases and associated proteins [BR:
cglo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
123262100
Messenger RNA biogenesis [BR:
cglo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
123262100
Membrane trafficking [BR:
cglo04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
123262100
Chromosome and associated proteins [BR:
cglo03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
123262100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
Motif
Other DBs
NCBI-GeneID:
123262100
NCBI-ProteinID:
XP_044580068
LinkDB
All DBs
Position
LG3:8815182..8820410
Genome browser
AA seq
1077 aa
AA seq
DB search
MSAKQKSSTNNKNKSPLSKVRPSSEIIAAKRKAAAEQKLKLLQTKVPDTNFIYDIYQSAM
DSRLLTRRETGLVYDYSMAEHQCLWDKNYPECPQRLTRTLERCKELGLIDRCKNISPRLA
TNKELLLKHSRKQIDILKATDGCTDLTKLEDLSSKYDAIYVHPSTYKLSKLAAGSTINLL
QAICKEEVQNGMAIIRPPGHHAMKTEYCGYCFFNNVAIAVESMLSEGLAKKVLIVDWDVH
HGQATQQMFYDDPRVVYFSIHRYEQGEFWPNLRESDYHYVGEGAGIGYNFNIPLNKTGMT
NADYLAIFQQVLLPMAYEFQPDLIVISAGYDAALGCPEGEMKITPAFYAHLLSQLLSLAS
GKVAVILEGGYCLESLSESAALTLRALLGDPCPMISTLDPPSASIRETILNVIYAQKPYW
SCYEFQDIYSIHSEDTKECDRHLPEIVFKENETKPTVYETRNYYPVQSDIFLNDIRNQLL
SLQLTTKLNKAPHRVSLVYDERMLKHCHPTDTRHPEIPERISGIFSKHEEYDLLKRCHRI
PGRIATEEELLLVHTESYVESMKATEKKKMSEVHKESRNFESVYLHTETWSSASVAAGSV
LQVVDSVLNGESQSGVAIVRPPGHHAERDAACGFCIFNNVSIAARYATEFHGCKRVLILD
WDVHHGNGTQAIFEEDPQVLYISIHRYDNGSFFPSSEQANYNVVGRGKGEGFNVNIPWNR
KKMGDTEYIAAFQQIIIPIAYQFNPELILVSAGFDACVGDPLGGYSVSPVAYGHFTHWLS
SLANGRLILVLEGGYNVNSISYAMTMCTKALLGDPLAPITRSTAALSTSAITSIKNVLKT
HKPYWPNLVYQAALPKENVIPQPVSLKFDMSPGVESKILQEEWQTEKNGIHQLSKEMGGL
NVNQSGQAKQCSDSQEQKPGKVEDQPGCSSSQSKPGSSRVNPTDSGNPHEDKPLMDSMMF
AIIPLSYCPHLELIAEVPAQGIDVKAPCKECNSTAENWICLHCYGVNCARAVNQHAILHG
QDEGHPLTLSFTDLSVWCYGCEAYVDNPRLHAAKSAAYLSKFNEELPWIYDEPRIEM
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcaaaacaaaagtcatcgaccaacaacaaaaataaatcgccattatcaaaagtt
agaccgtctagtgaaattatagctgcgaaaagaaaggctgctgctgaacaaaagttgaaa
ctcctgcagacaaaggtaccagacactaattttatttacgatatttatcaaagtgcaatg
gattcacgtctgctgactcggagagagacggggttagtttatgattattcgatggcagaa
catcaatgcctctgggacaaaaattatccagaatgtcctcaaagattaactagaacgcta
gaacgatgcaaagaactcgggttgattgataggtgcaagaacatcagcccgaggttggcg
acaaataaggagttattgctgaaacatagtcgcaagcagattgatattctgaaggcgact
gatgggtgtactgatctcactaaactcgaagatttatcttccaaatatgacgctatttat
gttcatccatcaacatataaattgtcgaaattggccgctggatcgacaattaatttatta
caagctatttgtaaagaagaagttcaaaatggaatggcaataattaggccaccgggacat
catgcaatgaaaacagaatactgtggttactgtttctttaataatgtagccattgcagtt
gagtcaatgctgagtgaaggcttagccaagaaagtgctaattgtcgactgggacgtccac
cacggacaagcgacgcagcaaatgttttatgacgatccccgcgtcgtgtatttctcgatc
caccgctacgagcagggtgaattctggcctaatttaagagaatctgattaccactacgtc
ggtgaaggcgcgggtattggatataatttcaacatacccctcaataaaactggtatgacg
aacgcagattatctagcaatcttccagcaagttctactgcctatggcatacgagtttcaa
ccagatctcatagtaatttcagcaggttacgacgccgctctcggctgtcccgagggagaa
atgaaaataactccagcattttacgcgcatttactttcacaattactcagcctagccagc
ggaaaagtagctgtgattctcgaaggcggatattgcttagagtctctgtcagaatcagcg
gctctaactttaagagctcttctaggtgacccgtgtccaatgatatcaaccctcgatcca
ccttcagcaagtatccgagagacaattttaaatgtaatttacgcacaaaagccttactgg
agctgctacgagttccaggacatatacagtatccactcagaagataccaaagaatgcgac
cgtcaccttccagagatagttttcaaagagaatgaaactaaaccaactgtctacgagacc
cgaaattattacccagtacaaagtgacatttttctaaatgacattcgcaaccaattactt
tcccttcaattgactaccaagttaaacaaagctcctcaccgagtgtccttggtctacgac
gagcgtatgctgaagcattgccaccctaccgacacgaggcatcctgaaattcctgaaaga
atctctggaatattttccaagcacgaagagtacgacttgctcaagcggtgtcacagaatt
cccggtcggattgccacagaggaagagcttctgctagtgcatactgaaagctacgtagaa
agtatgaaggcgactgaaaaaaagaaaatgtctgaagttcacaaagagtcacggaacttt
gagtccgtttacctccacaccgagacatggtccagcgctagcgtagcagcaggttcagtt
ctgcaggtggttgacagcgttctcaacggagaaagccagtcaggagtcgcgatagttcgt
cctccaggacatcatgccgagcgtgacgcagcttgtggcttctgcatcttcaacaacgtt
tccattgctgcgcgttacgctactgagtttcacggatgcaagcgcgtgttgatcctcgac
tgggatgtccatcacggcaacgggactcaagcgatatttgaagaagatcctcaagttctc
tacatctcaattcacaggtacgacaatggctcttttttcccttcctcagagcaagctaac
tacaacgtcgtcgggaggggaaaaggcgaaggcttcaacgtaaacattccctggaaccgc
aaaaaaatgggtgacactgagtacattgctgcctttcagcagatcattataccaattgct
tatcaattcaacccggaattaattcttgtatctgctgggtttgatgcgtgtgttggagat
cctcttggtggctacagcgtttctccggtagcttatggacactttactcactggttgtca
tcgctggctaatggtcggctgattttagtcttagaaggcgggtacaatgtcaactcaatc
tcttacgcaatgaccatgtgtactaaagctcttcttggagatcctctggctcctataact
cgcagcactgctgctttgtctacttctgctattactagtattaaaaatgttttaaaaact
cataaaccatactggccaaatttagtttatcaagctgcgttgccgaaagaaaatgtcatt
cctcaaccagtgagtcttaagtttgacatgagtccaggagtggagtccaaaattctgcaa
gaagaatggcaaactgagaaaaatggaatccatcagctgtctaaagaaatgggtgggttg
aatgtcaaccaaagtggccaggccaagcagtgttctgattctcaagaacaaaaaccgggg
aaggttgaggaccaacctgggtgtagctctagccaaagcaagcctggatcttcgagagtt
aatccaactgattcggggaatccccatgaagataaaccgctgatggacagtatgatgttt
gcaataattcctttgagttattgtcctcacttggaattgatagctgaggttccggcacaa
ggtattgatgtaaaagctccttgcaaagagtgcaatagtacagccgaaaattggatctgt
cttcactgctatggggttaattgcgcgcgagctgttaatcaacatgctattctccatgga
caagatgaaggacaccctttgactctcagcttcactgatctttctgtctggtgttatgga
tgcgaagcctacgttgataatccgagacttcacgctgctaaaagcgccgcttacctcagt
aaatttaacgaagaacttccttggatttatgatgaacctcgtattgaaatgtga
DBGET
integrated database retrieval system
