Colletotrichum higginsianum: CH63R_12688
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Entry
CH63R_12688 CDS
T08176
Name
(RefSeq) Histone deacetylase
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
chig
Colletotrichum higginsianum
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
chig01009
]
CH63R_12688
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chig03019
]
CH63R_12688
04131 Membrane trafficking [BR:
chig04131
]
CH63R_12688
03036 Chromosome and associated proteins [BR:
chig03036
]
CH63R_12688
Enzymes [BR:
chig01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
CH63R_12688
Protein phosphatases and associated proteins [BR:
chig01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
CH63R_12688
Messenger RNA biogenesis [BR:
chig03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
CH63R_12688
Membrane trafficking [BR:
chig04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
CH63R_12688
Chromosome and associated proteins [BR:
chig03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
CH63R_12688
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arb2
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
28871769
NCBI-ProteinID:
XP_018152079
UniProt:
H1V2E4
LinkDB
All DBs
Position
9:1462499..1464786
Genome browser
AA seq
745 aa
AA seq
DB search
MEGGDQDVVMGGDDRPSNHTTTPNGVTTPAGGEPKNDNSTSPDDEDEDDFDDLDEDADQQ
VMNQLRRRGLLPTACCYDDRMKLHVNADFGTTPHHPEDPRRIEEIYKAFKRAGLVYTGPE
SKIADVMRDTPTKYMWRIGTREATKEEILTTHTPLHYHWVESLSKMNYTELRDTSRHYDQ
GRASLYVGSLTFTAALLSCGGAIDTCKHVVEGNVKNAFAIIRPPGHHAEYDQPLGFCFFN
NVPVAVKICQQEYPEDCRKVLILDWDVHHGNGIQNIFYDDPNVLYVSLHVYQNGIFYPGK
PDNQEIPDGGLEHCGTGPGLGKNINIGWHDQGMGDGEYMAAFQKIIMPIAKEFNPDLVVI
SAGFDAAAGDELGGCFVTPTCYAHMTHMLMSLADGKVAVCLEGGYNLQAISTSAVAVART
LMGEPPPKMEIPMLNKDAARVLAKVQSYQAPYWECMRPGIVPVPDIQDLNATRLHDHIRL
GQRQNLAQRHQMIPLFIQRDLLFKSYENQVLVTPDIPSARRILVIIHDPPALLAQPDVID
SHVESHNAWIVDSVAQYIDWAVEKGIAVMDVNVPSKVSRDEDMDPYSPRTADKDLLNELQ
ELANYLWDNYLQLYEDADDILLIGVGRSYSGVRALLTGRDCKARVAGVACFVEGMLRPVK
SDVDNELATWYKGHSQIYVSHDHPCWNSEDTLRRVTKRRFGTVIRSEANGVQKMMQTHAG
EVQKWMLEMLAIRQNGDTTEDDKMT
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcggcgaccaagacgttgtcatgggcggggacgataggccgtcaaatcacaca
accactcccaatggtgtgactacgcctgctggaggagagcccaaaaacgataactcgacg
tctcccgacgacgaagatgaggacgacttcgacgacttggacgaagacgcagaccagcag
gttatgaaccagctgcgcagacgaggtcttttgccgacagcatgttgttatgatgaccgc
atgaagcttcatgtcaatgccgacttcggcaccacacctcatcacccggaggatcctcgt
cggatagaggagatctacaaagccttcaaaagggccggtctggtctacaccggcccagag
agtaagatcgccgacgttatgagagataccccaaccaagtacatgtggagaatcggcact
cgtgaggcaacgaaagaagagatccttaccacacacactccgctgcactaccactgggtt
gagagcctgtcaaagatgaactacacggagttgcgcgacacgagtcggcattacgaccaa
ggccgtgcatcgctctacgttggcagtcttactttcactgccgccctcctatcctgcggt
ggtgccatcgacacctgcaagcatgtcgtggaaggcaacgttaaaaatgcctttgctatc
atcagaccgcctggccaccacgccgagtacgatcagccgctcggtttctgcttcttcaac
aacgtgcccgtcgccgtcaagatctgtcagcaagagtacccggaggactgtcgaaaggtt
ctcatccttgactgggatgtccaccacggcaacggcatccagaacatattctacgacgac
ccgaacgttctctacgtctccctccacgtttaccagaatgggatcttttatcctggcaag
cccgacaaccaagaaatacccgatggcggtctagagcactgcggtacagggcctggtctt
ggcaagaacatcaatattggatggcacgaccaaggcatgggagacggcgagtatatggct
gcctttcaaaagatcatcatgcccatcgccaaagaattcaaccccgatctagtcgttatc
tccgccggattcgacgctgctgccggagatgagctcggcgggtgcttcgtgacaccgacc
tgctacgcgcacatgacgcatatgctaatgtctctggcggacggcaaggttgctgtatgc
ttggaaggtggctacaacttgcaggctatatcgacatccgccgtggctgttgctcgaacg
ttgatgggcgagccgccaccgaagatggagattcccatgctcaacaaggacgctgccagg
gttcttgccaaagtccagagctaccaggcaccctactgggagtgcatgagaccaggcatt
gttccagtgcctgatatccaagatctcaacgcgaccagactccacgaccacatcaggcta
ggccaacggcagaaccttgcacaacgtcaccagatgattcccctcttcatccagcgggat
cttttgttcaaatcctatgagaatcaggtcctcgtaactcctgatattcccagtgcgcgt
cgtatccttgtcatcatccacgacccaccagcattgctcgcgcaaccggatgtgattgat
agtcatgttgaatcccacaacgcctggattgtcgatagtgttgcgcaatacattgactgg
gctgtcgaaaaagggattgcagtcatggacgtcaacgtgcctagcaaagtatcacgagat
gaggacatggacccgtacagtccccgaacagcagacaaggacctgctgaacgagctccaa
gagttggcgaactatctttgggacaactacctgcagctctatgaggacgccgacgatata
ctactcatcggtgtgggtcggtcgtacagtggagtcagggcgcttttgaccggtcgagat
tgcaaagcgcgtgttgccggagttgcctgcttcgtcgaagggatgttgagaccagtgaag
tccgatgtcgataacgagctggcgacgtggtacaaggggcactcacagatttacgtctcg
catgatcacccatgctggaacagcgaggacacgctgcgcagagtgactaaacgacgattt
ggcacggtcatccgtagtgaggccaacggtgttcagaagatgatgcaaacgcatgctggg
gaggtccaaaaatggatgttggagatgctagcgattcgccagaacggagataccaccgaa
gacgacaagatgacttga
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