Ctenopharyngodon idella (grass carp): 127502195
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Entry
127502195 CDS
T08802
Name
(RefSeq) LOW QUALITY PROTEIN: exostosin-like 3
KO
K02370
alpha-1,4-N-acetylglucosaminyltransferase EXTL3 [EC:
2.4.1.223
2.4.1.224
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
cide01100
Metabolic pathways
Module
cide_M00059
Glycosaminoglycan biosynthesis, heparan sulfate backbone
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
127502195
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cide01003
]
127502195
Enzymes [BR:
cide01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.223 glucuronosyl-galactosyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
127502195
2.4.1.224 glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
127502195
Glycosyltransferases [BR:
cide01003
]
Glycan extension
O-Glycan
127502195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_64
Exostosin
ADIP
MscS_porin
EXOC6_Sec15_N
TBK1_CCD1
TPR_MLP1_2
DUF1664
Motif
Other DBs
NCBI-GeneID:
127502195
NCBI-ProteinID:
XP_051730806
LinkDB
All DBs
Position
20:complement(30255655..30283615)
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AA seq
917 aa
AA seq
DB search
MQRSGGIIGNNGQPWVLRRVRLTWLSFMLFFILVFFPLIAHYYLTTIDEAGGPDKRIFGP
RPGGELCEAKHVQDLCRIRESVSEELLQLEAKRQELNGEIARLNLRIEACKRSIDSAKQD
LLQLKNVISQTEHSYKELMAQNQPKLSLPVRLLPDKDDPGYPPPKSAQSCRLHSCFDYAR
CPLTSGFPVYVYDTGSYPWGEKLDPLVKQAFASSVKSSVYVTNNPNIACLYIVLVGEIQE
SPSSTPASPLDLEKQLKALPYWRLDGHNHLLVHLSRKSLTQNFLYNVSTGRAAVAQSTFF
ERQYREGFDMVVSPLVHALSEPNFLEVPPQVPVKRKYLFTFQGEKVESLRSSLLEAPPQS
FEEEMEGDPPADYDDRIIGTLKAVQDSHLDQVLVEFTCKNQPKPSLPTEWALCGEREDRL
EVLKVSTFALVISPGDGQLVASAGCSMRLFEALEVGAIPVVLGDHSKLPYHHLIRWSEAV
IMVPKPRITELHFLLRSISDNDLLAMRRQGRFLWETYFSTSESIFSTILASVRTSIQIPA
APIREEPAQEIPHKAGKLAGTDANMADNGDLDLGPVEVEPPYASPRFLRNFTYTVADVYR
TWNRAPGPFHLFPHTPLDPVLPSEAKFLGSGTGFRPIGGGSGGSGKEFQAALGGNVPREQ
FTVVMLTYEREEVLMNSLERLNGLPYLNKVVVVWNSPKPPSDDLLWPDIGLPIVVVRTEK
NSLNNRFLPWDAVETEAILSIDDDAHLRHDEIMFGFRVWREARDRIVGFPGRFHAWDVNH
QSWLYNSNYSCELSMVLTGAAFFHKYYAYLYXYVMPQAIRDMVDEYINCEDIAMNFLVSH
ITRKPPIKVTSRWTFRCPGCPQALSHDDSHFHERHKCINFFVKVYGYMPLLYTQFRVDSV
LFKTRLPHDKTKCFKFI
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgaagtggaggcatcatcgggaacaatggccagccatgggttctgcggcgagta
cggctcacctggctcagtttcatgctcttcttcatcctggtcttcttccctctcattgca
cattactacctcaccacaatcgatgaagcagggggaccagataagcgcatttttgggcca
agacctggaggagagctgtgtgaagcaaagcacgtacaagacctgtgtcgaatacgggaa
tctgtcagcgaggagctacttcagcttgaggcaaagcgtcaagagctcaatggcgagata
gcccgacttaacctacgcatcgaggcttgtaaacgtagtatcgacagtgccaaacaagac
ttgcttcaactcaaaaatgtcatcagccagacagagcactcttacaaggaacttatggca
caaaaccagccaaaactgtcgttgccagttagacttttaccagacaaggatgatcctgga
taccctcctccgaagtcggcccaaagctgtcgtttgcattcttgctttgattatgctaga
tgtccacttacatctggtttccctgtctatgtttatgacacaggatcatatccttggggt
gagaagttggacccacttgtcaaacaagccttcgcatcatctgtcaaaagcagtgtatat
gtgaccaataatccaaacattgcctgtctgtacatagtgcttgttggggaaatacaagaa
tcaccttcctctacccctgcttcacctttagaccttgaaaagcagctcaaggctttgccg
tattggaggttggacggccacaaccacctccttgtccatctttctagaaagtctctgact
cagaacttcctgtacaatgtgagcacaggacgagcagcagtggcacagtctacctttttt
gaacgtcaatatagagaaggtttcgacatggtggtgtctcctctggtccacgctctgtct
gagcccaacttcctagaggtgcctccgcaagtccctgtcaagaggaagtacctctttacc
tttcagggagaaaaggttgagtctttgaggagcagcttgcttgaagccccaccacagtcc
tttgaggaggaaatggaaggggatccaccagctgactatgatgatcgtattatcggcaca
cttaaagctgtacaggacagtcacctagaccaggttcttgtggagttcacttgcaagaat
cagcccaagccaagtttaccaacagagtgggcattgtgtggcgagcgcgaggatcgttta
gaggtactgaaggtttctacatttgccctggtgatatctccaggtgatggccagttggtt
gcatctgctggctgtagcatgagactttttgaggctttggaagttggggcaataccggtg
gtgcttggcgaccactcaaagttgccctaccatcacctcatacgctggagtgaggcagtc
attatggtacccaagcctcgcattactgagctgcactttctgttgcgtagcatctcagac
aatgatcttctggccatgcgacgacagggtcggtttctttgggagacgtacttctccacc
tcagagagcatcttcagcaccatcctggctagtgtacgaaccagcatccagataccagca
gcacccatacgtgaggagcctgcccaggagattccccacaaagctggaaagttggcagga
accgatgctaacatggctgacaatggcgacctcgatctagggcctgttgaagtagagccc
ccttatgcctcgccacgcttcttgcgtaacttcacgtacacagttgctgatgtctaccgc
acctggaatcgtgcacctggccctttccatctattcccacatactcccttggaccctgta
cttccttcagaggccaagtttctggggtcggggactggtttccgccctatcggtggtggt
tctgggggatctggtaaagagtttcaggccgctcttggaggtaacgttccacgggagcag
ttcactgtggtcatgcttacttatgaacgggaggaggttcttatgaactcactggaaaga
ctaaatggtcttccttatctcaacaaagtggtggtagtgtggaattcccccaaaccacct
tctgatgatctgctctggccagacattggtctacctattgtggtggttcgcacagagaaa
aacagcttaaacaatcgtttccttccctgggatgcagtcgagactgaggctattttgtct
attgatgatgatgcccatcttcgacatgatgaaattatgtttgggttcagggtgtggcgg
gaggccagagaccggattgtggggttcccgggaaggtttcatgcatgggatgtaaatcac
caatcttggctctacaattccaactactcctgcgagctctccatggtgctgacgggtgcg
gccttcttccataagtattacgcatacctctatntctatgtcatgcctcaagctatacgt
gacatggtggacgagtacatcaactgtgaggatatcgccatgaacttcctcgtgtcgcat
atcactcgcaaaccccccatcaaggtgacgtcacgttggaccttccgctgtcccggctgt
ccacaggctctgtcacatgacgattcgcacttccatgagcgccacaagtgcatcaacttc
ttcgtaaaagtctacggatacatgccgctgttatacactcagttcagagtggactcggta
ctcttcaagacgcgattgccgcacgacaagacaaaatgttttaaattcatttaa
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