Ctenopharyngodon idella (grass carp): 127517687
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Entry
127517687 CDS
T08802
Name
(RefSeq) DNA polymerase beta isoform X1
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
127517687
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cide03400
]
127517687
Enzymes [BR:
cide01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
127517687
DNA repair and recombination proteins [BR:
cide03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
127517687
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
127517687
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_lambd_f
DNA_pol_B_thumb
HHH_8
HHH_5
Cdd1
NTP_transf_2
HHH_2
DUF4806
Motif
Other DBs
NCBI-GeneID:
127517687
NCBI-ProteinID:
XP_051759630
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All DBs
Position
8:complement(32784081..32820118)
Genome browser
AA seq
357 aa
AA seq
DB search
MSKRKAPQETLNEGITDFLIELANYEKNVNRAIHKYNAYRKAASVIAKYPQKIKSGTEAK
KLDGVGAKIAEKIDEFLATGKLRKLEKIRNDDTSSSINFLTRVTGIGPAAARKFYDEGVR
NLEDLKKIEHKLNHHQQIGLKYFEEFEKRIPRAEMQKMEALILKELDLVDPEYIGTICGS
YRRGAESSGDIDILLTHPDYTSQSEKQPKLLHAVVDHLESIGFITDTLSKGDTKFMGVCQ
LQREEEDEEEYLHRRIDIRLIPKDQYFCGVLYFTGSDIFNKNMRTHALEKGFTLNEYTIR
PLGVTGVAGEPLLVDSEKDIFDYIQWKYREPKDRCVCVCVCVCVCVCVAHLGHNSVI
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaacgaaaagcgccacaagaaactctgaacgaagggatcacagatttcctcata
gagttggccaattatgagaaaaatgtcaacagagccatccataaatacaatgcttacaga
aaagcagcgtctgtgatcgccaaatacccacagaagatcaaaagtgggacagaagcaaag
aaactggatggagttggtgcaaagatagcagagaaaattgatgagtttttagcaacagga
aaactgcgtaagctggaaaagattcgtaatgacgacacaagctcctccatcaacttctta
accagagtgactggaatcggtcctgctgcggctaggaagttttatgacgagggcgtcagg
aacttggaagatctgaagaagatcgaacacaaactcaaccaccatcagcagattggctta
aagtactttgaagagtttgagaagagaatccctcgagcagaaatgcagaaaatggaggct
ctgattctcaaagaactggatctggtggaccccgagtacatcggcaccatctgtggcagc
tacagaagaggagccgagtcgagtggtgatattgatatactgctgacccatccggactac
acctctcagtctgagaaacagccgaagcttcttcatgctgttgtggatcatctggagtcc
atcggcttcatcaccgacacgctgtctaaaggagacactaagtttatgggtgtgtgtcag
ctgcagagagaagaggaggatgaggaggagtatcttcaccgccgtattgacatcaggctc
attcctaaggatcagtatttctgcggtgtgctgtacttcaccggcagtgacatcttcaac
aagaacatgaggactcacgcgctggagaagggcttcactctcaacgagtacaccatccgt
ccactgggagtcaccggtgtggctggagagcctctgctggtggacagtgagaaggacatc
tttgactacatccagtggaaatacagggaaccaaaggaccgctgtgtgtgtgtgtgtgtg
tgtgtgtgtgtgtgtgtgtgtgttgctcatttaggtcataatagtgtcatttaa
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