Canis lupus dingo (dingo): 112673134
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Entry
112673134 CDS
T08371
Symbol
HDAC6
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
clud
Canis lupus dingo (dingo)
Pathway
clud04613
Neutrophil extracellular trap formation
clud05014
Amyotrophic lateral sclerosis
clud05034
Alcoholism
clud05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
clud00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
112673134 (HDAC6)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
112673134 (HDAC6)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
112673134 (HDAC6)
09165 Substance dependence
05034 Alcoholism
112673134 (HDAC6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
clud01009
]
112673134 (HDAC6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clud03019
]
112673134 (HDAC6)
04131 Membrane trafficking [BR:
clud04131
]
112673134 (HDAC6)
03036 Chromosome and associated proteins [BR:
clud03036
]
112673134 (HDAC6)
Enzymes [BR:
clud01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
112673134 (HDAC6)
Protein phosphatases and associated proteins [BR:
clud01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112673134 (HDAC6)
Messenger RNA biogenesis [BR:
clud03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
112673134 (HDAC6)
Membrane trafficking [BR:
clud04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
112673134 (HDAC6)
Chromosome and associated proteins [BR:
clud03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
112673134 (HDAC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
112673134
NCBI-ProteinID:
XP_025324515
Ensembl:
ENSCAFG00020020385
LinkDB
All DBs
Position
X:42002963..42023418
Genome browser
AA seq
1217 aa
AA seq
DB search
MARLKGAALSTDTQCRRIGAGSRETGPMEKRASSTRRPAGRQEFGGGSPGRSLKKGLRSS
RIRGEVSPTMTSTGQDSTTTRQRRSRHNPHSPPHDSSVTSKRGVKKGALRHSSPSLAEVK
KKGRMKKLSQAAEQDLIVGLQGLDLNLEAKTLCGTGLVFDEQLNEFHCLWDDSFPEGPER
LHAIKEQLIQDGLLDRCVSFQARFAEKEELMLVHSLEYIDLMETTQYMNEGELRILADTY
DSVYLHPVWIRTNSYTCACLASGSVLRLVDAVLRNEIRNGMAIVRPPGHHAQHSLMDGYC
MFNHVAVAARYAQQKHNIERVLIVDWDVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPH
LKASNWSTIGFGQGQGYTINVPWNQVGMRDADYIAAFLRLLLPVALEFQPQLVLVAAGFD
ALQGDPKGEMATTPAGFAQLTHLLMGLAGGKLILSLEGGYNLRALAEGVSASLHTLLGDP
CPILESPSAPCPSAQASLFCALEALEPFWEVLVRSAEALEEDILEEEKAEKEEERPWQPS
VLPVLTWPMLQARTGLVYDQRMMGHYNLWDNHHPEMPQRVFRIMRRLEELGLAGRCLTLP
TRPATDAELLTCHSAEYVGRLRATEKMKTRELHREGSNFDSIYICPSTFACAQLATGSVC
RLVEAVLAREVLNGTAVVRPPGHHAERDAACGFCFFNSVAVAARHAQAISGHALRILIVD
WDVHHGNGTQHIFEEDPSVLYISLHRYDHGTFFPMGDEGASSQVGQAAGTGFTVNVAWNG
PRVGDADYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLM
GLANGRVVLILEGGYNLTSISESMAACTRSLLGDPPPLLTLSRPPLSGALASITETIQVH
RRYWRSLRVMKVEDKEGPSTSELITKKVTQPANPGSAERMTTPEGNILDIDTEKGPSASS
VEESTPGQAKSETAVVEFNQDQSLEATTGETTLYQTIPEAATEGTTPGQTTSEEAVGGAE
VIQTSCTDNQTPPTSPVQGATPQISPSKLIENLRTLELNIEAEKAPESQIPEEEGLLGEA
AGGQDVDDSVLNESCGDHADTDQVVLYAVTPLPWCPHLVAVCPIPESGLDVTQPCQDCGV
LQENWVCLSCYQVYCGRYISAHMLHHHEDSGHPLVLSYVDLSTWCYNCEAYVHHQALLDV
KNVAHQNKFGEDMPHSH
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcctgaagggcgcggccctgagcaccgacacacagtgtaggcggatcggggcg
ggcagtagagagaccggcccaatggaaaagagggcctcaagcacccgccgtcccgcaggt
cgccaggaatttggcggcgggagccctgggcggagtttgaaaaaagggctgcgctcaagc
cgcatcaggggtgaagtctccccgaccatgacctccaccggccaggattccaccacaacc
aggcagcgaaggagtaggcataacccccattcgcccccccacgactccagcgtcacctcg
aagcgaggtgttaagaagggtgccttacgccactccagccctagtctagcagaggtaaag
aagaaaggcagaatgaagaagctcagccaagcagcagagcaagacctaatcgtgggcctg
caagggctggatctgaaccttgaggccaagacactttgtggcactggcttggtgtttgat
gagcaactaaatgaattccactgcctctgggatgacagctttcctgagggccctgagcgg
ctccatgccatcaaggaacaactgatccaggatggcctcctggaccgctgcgtgtccttt
caggctcggtttgctgaaaaggaggagctgatgttggttcacagcctagaatacattgat
ctgatggagacgacccagtatatgaatgagggagagctccgcatcctagctgacacctat
gactcagtttatctgcatccggtatggataagaactaactcctatacttgtgcctgcctg
gcctcaggctctgtccttaggctggtggatgcagtcctgaggaacgagatccggaatggc
atggccattgtcaggcctcctggacaccacgcccagcacagccttatggatgggtattgc
atgttcaaccatgtggccgtggctgcccgctacgctcaacagaagcataacattgagagg
gtccttatcgtggattgggatgtacaccatggtcaaggaacacagtttacctttgaccag
gaccccagcgtcctctatttctccatccaccgctatgagcagggtcggttctggccccac
ctgaaggcctctaactggtccaccataggttttggccaaggccagggatataccatcaat
gtgccttggaaccaggtggggatgcgagatgctgactacattgctgctttcctgcgcctc
cttctgccagtcgcccttgagttccagccccagctggtcctggtggccgctggatttgat
gccctccaaggggaccccaagggtgagatggccaccactccggcagggttcgctcagcta
acccacctgctcatgggtctggcaggaggcaagctgatcctatctctggagggcggctac
aacctccgcgccctggctgaaggtgtcagcgcctcactccacacccttctgggagaccct
tgccccatcctggagtctcccagtgccccctgcccaagtgcccaggcgtcactcttctgc
gccctggaagccctggagcccttctgggaggtccttgtgagatcagctgaggccctggag
gaggacatcctggaggaggaaaaggcggagaaggaagaggagagaccgtggcagccctca
gtgctcccagttctgacgtggcccatgctgcaggctcgcacagggctggtctatgaccag
cggatgatgggtcactacaacttgtgggacaaccatcacccagagatgcctcagcgagtc
tttcggatcatgcgccgtttggaagagctgggccttgcggggcgctgccttaccttgccc
acacgtcctgccacggacgctgagctgcttacctgccacagtgccgagtatgtgggccgt
ctgcgggcaaccgagaagatgaaaacccgggagctgcaccgcgagggctccaactttgac
tccatctacatctgccccagcacctttgcctgtgcgcaactggccactggctctgtgtgc
cgcctggtggaggctgtactagccagagaggttttgaatggtactgctgtggtgcgtccc
ccaggacaccacgcagagcgggatgccgcttgtggtttctgctttttcaactctgtggct
gtggctgctcgccatgcccaagccatcagtgggcatgcactgcggatcctgatagtggac
tgggatgtccatcatggtaatggaactcagcacatatttgaggaagaccccagtgtgctc
tacatttccctgcatcggtatgatcatggcaccttctttcccatgggggatgagggtgcc
agcagccaggtaggccaggccgcaggcactggcttcactgtcaacgtggcctggaatggg
ccccgcgtgggtgacgccgactacctggctgcctggcatcgtctggtgcttcctattgcc
tatgagtttaacccggaactggtgctggtctcagctggctttgacgctgcacggggggac
ccgctggggggctgccaggtgtcaccggagggctatgcccacctcacccacctgctgatg
ggcctcgccaatggccgtgttgtcctaatcctggagggtggctataacctgacatccatc
tcagagtccatggctgcctgtacccgttccctccttggggacccaccaccactgctaacc
ctgtcgaggcccccactctcgggggccctggcctccatcaccgagaccatccaagtccat
cgcagatactggcgcagcttgcgagtcatgaaggtcgaagacaaggagggaccctctact
tctgagttgatcaccaagaaagtgacccaaccagccaaccctgggtcagctgagaggatg
accacaccagaagggaacattctggacatagacacagagaagggtccctcagcatcatcc
gtggaagagtccactcccgggcaagctaagtcagagactgctgtggtggagttcaatcag
gaccagtccttggaggctaccacaggggaaaccactctgtaccagaccatcccagaggca
gccacagaaggaaccacaccaggccagaccacctcagaggaagctgtggggggagctgaa
gtgatccaaacctcatgtactgataaccagactcccccaacctcacctgtgcaaggagcc
acaccccagatatcccccagtaagctgattgagaatctcaggaccttggaactaaacatc
gaggctgagaaggcaccagaatctcagatcccagaagaggaggggctactaggagaggca
gctggaggtcaggacgtagatgattctgtgctgaatgagagctgtggggaccatgctgac
actgaccaggtcgtgctttatgccgtgacaccgctgccctggtgtccccatttggtggca
gtgtgccccatccctgagtcaggcctcgacgtgacccaaccttgtcaggactgtggagtg
ctccaggagaactgggtgtgtctctcttgctatcaggtctactgcggtcgttacatcagt
gctcatatgctccaccaccacgaagactcaggacacccgctggtcctcagctacgtcgac
ctatccacctggtgttacaactgtgaggcctatgtccaccaccaggctctcctagatgtg
aagaacgtggctcaccagaacaagtttggggaggacatgccccactcacactaa
DBGET
integrated database retrieval system
