Colossoma macropomum (tambaqui): 118813880
Help
Entry
118813880 CDS
T09004
Symbol
hdac6
Name
(RefSeq) LOW QUALITY PROTEIN: histone deacetylase 6
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cmao01009
]
118813880 (hdac6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmao03019
]
118813880 (hdac6)
04131 Membrane trafficking [BR:
cmao04131
]
118813880 (hdac6)
03036 Chromosome and associated proteins [BR:
cmao03036
]
118813880 (hdac6)
Enzymes [BR:
cmao01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
118813880 (hdac6)
Protein phosphatases and associated proteins [BR:
cmao01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
118813880 (hdac6)
Messenger RNA biogenesis [BR:
cmao03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
118813880 (hdac6)
Membrane trafficking [BR:
cmao04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
118813880 (hdac6)
Chromosome and associated proteins [BR:
cmao03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
118813880 (hdac6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
Motif
Other DBs
NCBI-GeneID:
118813880
NCBI-ProteinID:
XP_036435365
LinkDB
All DBs
Position
Unknown
AA seq
1111 aa
AA seq
DB search
MDSASNPAPPRAPKGSSRSPQKPQQNSAKRENSKPNHKQALQEARRKGRMDRGKAEEEMT
NKLKNLDLRCKPKATGTGLVYSDAFTRYRCLWDASHPESPERVATIVELMEKEGLLSRCV
QVETRTASEEELSLVHTKEYIDRMKSTQKMTEEELKSVSDGYDSVYLHPDSFTCACLAVG
SVLQLVDKVVTSELRNGFSVSRPPGHHAQTDQMNGYCMFNNLAVAARYAQKQHGVQRVLI
VDWDVHHGQGTQYIFQEDPSVLYFSVHRYEDGSYWPHLLELDSNAVGTGPGQGYNVSVPW
NKTGMQDGDYVAVFQRLLLPIAYEFRPQLVLVAAGFDSVVGDPKGEMCASPQCFSVLTHM
LMGLAQGRVVLALEGGYNLQFTAEGACASLRSLLGEPCSHLTSPGAPSESALKSISKTVA
ALYPFWTSLQILEGGPLSEAEPLPSAVCVEMKLETSLRSTGLVYDQRMMEHHNMWDSHHP
ELPQRISRIFSRHEELGLVDRCQRIPARLATEEELALCHGLAHIDTIKSTEQMKPRDLYR
LGDEYNSIYISNESYRSALLAAGACFNSAQAILTGQVRNGVAVVRPPGHHAERDTACGFC
FFNTAALTARYAQSITHSSLRVLILDWDVHHGNGTQHIFEEDDSVLYISLHRYEDGTFFP
SSEDAKYDKVGRGKGAGYNVNIPWNGAKMGDPEYLAAFHNVVMPIAREFAPELVLVSAGF
DAARGDPLGGYQVTPEGYAHLTHQLLSLAAGRVLVILEGGYNLTSISESMAMCTSMLLGD
APPMLPPLPPPHSSAAVTINNVLRVHAPYWRSLRIQIPESLRSSLPSPQPKSKRMSAGKG
KKSPRQVTPAQSPSQQQQVSSVTTSPASPPSAQEDSGLDEITQGLHSLDLSSSTSANSSP
TSIPVGGARPKVKPSPQRDVIATQEVSPVKVMERGRQEPGVKVESTPIKEEKQSVPEAVD
TDVVALVDQESCVLEGACGYTKKSVFELVCGAVDMGGDTMYVVDPLAWCPHLDSVQPVPA
DGIDVFRPCEECGADTENWICLCCYKVLCGRFVNEHMVTHGQVSDHPMVLSFADLSVWCY
PCESYVHNKVLYEAKNAAHLAKFGEEIPPIN
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atggattctgcatcaaatcccgctccaccaagagctccaaaaggttcctctcgttctccc
caaaaaccccaacagaactctgccaaaagagaaaacagcaaacccaaccacaagcaggct
ctccaggaggccaggaggaagggcagaatggatcgaggcaaagcagaagaggagatgacc
aacaagctcaaaaacctggatttgcgttgcaagcccaaggcaactggtacaggccttgtt
tactcggatgcattcactcgctatcgctgcctctgggatgccagccacccagaatcacca
gagagagtggctactatagtagagttgatggagaaggaggggcttctgtctcgctgtgtg
caggtggagaccagaactgcatcagaggaggaactttctcttgttcacacgaaagagtat
attgatcggatgaagtcaacacagaagatgacagaagaggagctgaaatctgtctccgat
ggctatgactcagtttatctccatcctgactctttcacctgtgcctgtctagctgttggc
tctgtcctccagctagttgacaaagtggtgacatcagagcttcgaaacggcttctctgtg
tccaggcccccaggacaccacgcccagactgaccagatgaatggatactgcatgtttaat
aatctggcagtggcagcccgctatgcccagaaacagcatggtgtccagcgggttttgatt
gtggactgggatgtgcaccatggtcagggaacccagtacatattccaggaagatcccagt
gttttgtatttctctgtgcatcgttatgaagacggttcttactggccccacctgctggaa
ttggacagcaatgctgtgggtacaggaccagggcaaggctataatgtcagtgttccctgg
aacaagacagggatgcaggatggagactatgttgcagtgttccagagacttctcctaccc
atagcctatgagtttcgtcctcaactagttttggtggccgcaggctttgattctgtggtt
ggtgatcccaagggtgagatgtgtgcgagtccccagtgtttctctgtactgactcacatg
ctgatggggctggctcagggtagagtagtgcttgcgctggagggcggctataacttgcag
ttcactgcagagggtgcctgtgctagtttgaggtcactgctaggtgaaccctgctctcac
ttgacctctccaggtgccccaagtgagagtgctctgaagtccatctctaagactgttgct
gctctgtatccattttggaccagcctgcagatactggagggaggccctctttctgaggca
gagcccctgccctctgctgtttgtgtcgagatgaaactggagacttccttgcgcagcact
ggtcttgtgtatgaccagcgcatgatggagcaccataacatgtgggacagccatcatcca
gagctccctcagagaatctcacggatcttttctcgtcatgaggagttggggcttgtggac
cgttgccagcggattccagcccgtttagccacggaggaggagcttgctctctgtcatggc
ttggcacacatagacactataaagagcacagagcagatgaagcccagagacctgtacagg
ctgggagatgaatataattccatctacattagcaatgagagctacaggagtgcattgctg
gcagccggagcctgtttcaactcagcccaggccatcctcaccggccaggtgcgaaatggt
gtggctgttgtgcgtccccctggacaccatgcagagagagatacagcatgtggtttctgc
ttcttcaacacagctgccctgactgctcgttatgcccagagcattacccacagttccctg
cgagtcctcattctggactgggatgtgcaccatggcaatggaactcagcatatctttgaa
gaggatgacagtgtcctgtacatctctcttcatcgctatgaggatggtacattcttccct
tcctcagaggatgctaaatatgataaggtgggacgagggaagggtgcaggctataatgtc
aacatcccctggaatggagcaaagatgggggacccagaatacctggcagcgttccacaat
gtggtgatgcctattgcacgtgagtttgccccagagcttgtgctggtgtcagctgggttt
gatgctgcacggggtgatcctttgggtgggtaccaggtgaccccagaaggctatgcccac
cttactcaccagctgctgagtctagctgcaggacgagttttggtcatcttggagggaggt
tataacctcacctccatctctgagtccatggccatgtgcaccagtatgctccttggagat
gcgcctccaatgctcccccctctgcctcctccacactccagtgctgccgtcaccatcaac
aatgtcctgcgagtgcacgcaccctactggagatcgctccgaatacagattccagagtcc
ctgcgctcgtcgttgccctctcctcaacccaagagcaagcgaatgtcagcagggaagggc
aaaaaatctccacgtcaggtcactcctgcacaaagtcccagccagcagcagcaagtttcc
tcagtgacaacttcaccagcatctcccccttctgcccaggaggactcaggcctggatgag
atcacccagggcctgcactcgctggatctcagttcttctacctcagccaattccagccca
acttctatccctgttggaggggcacggcccaaagtgaagcccagcccacagagggatgtc
atagcgacacaagaagtgtcgcctgtgaaagtgatggagagaggcagacaggaacctggt
gtaaaagttgagtccactcccatcaaagaggagaaacagtcagttccggaggcagtggac
acagatgttgttgccttggttgaccaggagagctgtgtgctagagggagcttgtggctac
acaaagaaatctgtctttgagcttgtctgtggcgctgtggatatgggcggggacacgatg
tacgtggtggacccgctggcatggtgcccacatctggactcggtgcagccagtgccagca
gatggcatcgacgtgttccggccatgcgaggagtgtggagccgatacagagaactggatc
tgtctctgctgctacaaggtgttgtgtgggcgctttgtaaatgagcacatggtgacccac
ggccaggtgtccgatcaccctatggttcttagctttgccgacctgtctgtctggtgctac
ccctgtgagtcctacgtccacaacaaggtgctgtatgaagccaagaatgcagctcatctc
gccaagtttggggaggaaattccccccatcaactaa
DBGET
integrated database retrieval system
