Cucurbita maxima (winter squash): 111478687
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Entry
111478687 CDS
T05246
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 1 homolog isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
111478687
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmax03019
]
111478687
04121 Ubiquitin system [BR:
cmax04121
]
111478687
03036 Chromosome and associated proteins [BR:
cmax03036
]
111478687
03400 DNA repair and recombination proteins [BR:
cmax03400
]
111478687
Messenger RNA biogenesis [BR:
cmax03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
111478687
Ubiquitin system [BR:
cmax04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
111478687
Chromosome and associated proteins [BR:
cmax03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
111478687
DNA repair and recombination proteins [BR:
cmax03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
111478687
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
zf-HC5HC2H
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-RING_6
zf-HC5HC2H_2
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4_3
BRCT_2
zf-rbx1
zf-RING_5
zf-RING_10
zf-RING_4
RTT107_BRCT_5
Motif
Other DBs
NCBI-GeneID:
111478687
NCBI-ProteinID:
XP_022978858
UniProt:
A0A6J1IUG7
LinkDB
All DBs
Position
Unknown
AA seq
1111 aa
AA seq
DB search
MGDPGHLEKMGIELKCPICLSLLNSAASLGCNHIFCFVCIEKSMKSGSNCPVCKVPYRRR
EVRPAPHMDNLVSIYKSMEAASGVNIFDTQNLSSDNLSDGDKQVEGDSSGSKRLKTETSG
RTAYELRTLKKEPQKIQKSKGKNSASSPLKPSFPRKKRVQVPQRPLSETPTEPVKLACSL
NEVNEEESRKGTDASLDKGQPVLSPFFWLRERDEEDEKSNQESDLDQPTDSMSMNVLSFS
DIKDSLEESTSKAPLEEVCGKPSNDLDLFDSEMFEWTQRACSPELCSSPFKRQVEDIAGT
ETSLLAAAPDEELRKQNPNGSYNRIGNILDILVPNVPPLEGNSVKDHTARANLTRKGRKK
KEIALKKCSKRLAEAASGKYSQAATETECSSQKQQHDVINSFGSLKNSTKRSNKKMHFDT
DANKAIFESVPAVPINLATPNENFKTKTPAFPEVEKVNQFLEKSRKNGRASKKTLFGIDA
IKATPENVPADPVSLGVPDGGHKNFGTEILALPKGEKVYELPESSCKKGRGRKKAHFGNN
ANKTILEDIPAHPISLGTPNDGPENFESEVSAFQKVEKASQFPEKCSKNGGAHGDQRVVQ
CRMKSKKQKLDSVDDKLQENPYFNQDQHDSSAIPVLITAPSAVATPTDQKSAREKQEKNF
SVCVITSEYDNITQGKYVGAQENEGQLCEKLGCSDDADNLDSMTKKGCSGKRERFDDEFQ
CAFCRSSEESEASGRMGHYFNGKPIDTDAIKNSKVVHAHWNCVEWAPNVYFDGSTAINLE
AELSRSRRIKCGCCGNKGAALGCYEKNCRKSFHVPCAKLMPQCRWDTENFVMLCPLHPDS
KLPSQDLEPQELKSSCAPKRQSNTKCIAVAREISNHGRFTFRESSKKLVLCCSALTTAER
EAVAEFQRLSGVPVLQKWDDSVTHIIASTDENGACKRTFKILMGILEGKWILGIEWIKAC
KQDMEQIEEERFEITLDVHGIRDGPQLGRLRVLNNQPKVFSGFKFFFTSDFLPSYKGYLQ
QLATAAGGTILLRKPVSSNNQSSSCSSPNCQVFIIYSLELPDQCNPGEKNEILNRRRSNA
ELLAESAAAKVATNLWLLNSIASSKLRSLVE
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atgggggatcccggccatctggagaagatgggaatagagcttaaatgcccaatttgtctg
agtcttttgaactctgccgcttcactcggatgcaaccacatattctgctttgtatgtata
gagaaatcaatgaaatcgggttcgaactgcccagtttgtaaggtgccttatcggcgaaga
gaagttcgtcctgctccacacatggataatttggtgagcatttacaaaagcatggaagct
gcttcgggagttaatatatttgatacccagaatttgtcttctgataatttatctgatgga
gacaaacaagttgaaggtgatagcagtggttcaaaacggctcaaaacagaaaccagtggg
agaacagcttatgaactgagaactttgaaaaaagagccacaaaaaatacaaaaatccaag
gggaagaattctgcttcttcccctctgaaaccttcatttccaagaaagaagagggttcag
gtgccgcaacgtcctctttcagagacacctaccgaacctgtaaagttagcatgtagtctt
aatgaggtgaatgaagaagaatcgagaaaaggtacagatgcttcgttggataaaggtcag
ccagttctttcaccttttttttggttgagagaaagagatgaagaagatgaaaagtcgaac
caggagtcggatttggatcaacctacagactcgatgtcaatgaatgttctttccttcagt
gatatcaaggattcattggaagaaagcacttcaaaggctccattggaggaagtgtgtggc
aagccatccaacgacttggatctctttgatagtgaaatgtttgaatggactcaaagagcc
tgttcccccgaactttgttcaagtccctttaaacggcaggttgaagatattgctggaact
gaaacatcattattggcagcagcccctgatgaagaactaaggaagcaaaatccaaatgga
agctataatcgaattggtaatatcctggacatcttggtacctaatgtgccccctctggaa
ggcaacagtgtgaaggatcatactgcgcgtgctaatcttaccagaaaaggtaggaagaaa
aaggaaattgctctgaagaaatgttctaaaagattggcagaagcagctagtgggaaatat
tcccaggcggccaccgaaactgaatgctcgagtcaaaagcagcagcacgatgttatcaac
agctttggtagtctgaaaaatagtaccaaaagaagcaataagaaaatgcacttcgatact
gatgcaaataaggctatttttgaaagtgttcctgccgttccaattaatttagcaactcca
aatgagaatttcaaaaccaagacaccagcctttccagaagtggaaaaggttaatcaattc
ctagaaaagagtcgcaagaatggcagagccagcaagaaaacactctttggtattgatgct
attaaggcgactcctgaaaatgttcctgctgatccagttagtttaggagttccagatggt
ggacataagaattttggaaccgaaatattagctttaccaaaaggtgaaaaggtttatgaa
ctcccagaaagtagttgcaagaaaggcagaggcaggaagaaagcgcacttcggtaacaat
gcaaataagacaattcttgaagatattcctgcccatcccattagtttaggaactccaaac
gatggtcctgagaattttgaatcagaggtatcagcttttcaaaaagtggaaaaggctagc
caattccccgaaaaatgtagcaagaatggcggagcccacggagaccagagagtggtccaa
tgccgcatgaagtctaagaaacaaaagctggattcagtggacgacaaactgcaagagaac
ccatatttcaatcaggatcagcacgatagttctgctattcctgttttgatcaccgcaccg
tctgcagttgccacgccaactgatcaaaagagtgcacgtgagaaacaagagaaaaatttc
tctgtttgcgtaataactagtgagtacgataacatcacccaagggaaatatgttggtgct
caggaaaatgaaggtcagctctgtgaaaagcttggatgcagtgacgatgcagacaacttg
gattctatgaccaaaaaaggttgttcagggaaacgagaaagatttgatgatgaatttcaa
tgtgctttctgtcgctcatcagaagaatcagaggcttctggaagaatgggccactatttc
aatgggaagccgatcgatacagatgccatcaaaaactcaaaggtcgtacatgcccactgg
aattgtgttgaatgggcgcccaatgtttatttcgatggctccactgcaattaaccttgaa
gctgagctcagtagaagtcgaagaattaaatgtggttgctgtggaaataagggtgctgct
cttgggtgttatgagaagaattgtcgcaagagctttcatgttccttgtgcaaagttgatg
cctcaatgtcgatgggataccgaaaattttgtgatgttatgccctctgcatccggattct
aaactgccaagccaggatctggagccccaagaactgaaaagcagttgcgctcctaagcga
caatcgaacactaaatgtatagctgttgcacgtgagatcagcaatcatggaaggtttaca
tttcgtgaatcatctaagaaattggttctgtgctgttcagctctcaccacagcagagagg
gaagctgtagctgaatttcagagattatctggagttccagtgttacaaaaatgggatgat
agcgttacacatataattgcatcaacggatgaaaatggagcatgcaaacgaaccttcaaa
attttgatgggtattttggagggaaaatggatattgggtattgaatggattaaggcttgt
aaacaagacatggaacaaatagaggaagaacgctttgagattactctagatgtccatgga
atcagggatggccctcaacttggaagattgagagtcctgaacaatcaaccaaaagtcttt
tctgggttcaagttcttctttacatcagatttcttaccttcatacaaaggatatctccaa
caacttgcaactgcagcaggaggaactattctgcttagaaaaccagtttcaagcaacaac
caaagcagctcttgttcttcacctaactgccaagttttcatcatttacagtcttgagctt
cctgatcaatgcaatccaggtgaaaagaatgagattctcaatcgcaggcgatcgaatgcc
gaattgcttgctgagtcggccgcagccaaagttgcaacaaatttgtggcttttaaactcg
attgcaagcagtaaattaagaagccttgtggagtaa
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