Cucurbita maxima (winter squash): 111496720
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Entry
111496720 CDS
T05246
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 1 homolog
KO
K10683
BRCA1-associated RING domain protein 1
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
111496720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmax03019
]
111496720
04121 Ubiquitin system [BR:
cmax04121
]
111496720
03036 Chromosome and associated proteins [BR:
cmax03036
]
111496720
03400 DNA repair and recombination proteins [BR:
cmax03400
]
111496720
Messenger RNA biogenesis [BR:
cmax03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
111496720
Ubiquitin system [BR:
cmax04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
111496720
Chromosome and associated proteins [BR:
cmax03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
111496720
DNA repair and recombination proteins [BR:
cmax03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
111496720
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
zf-HC5HC2H
zf-C3HC4_2
BRCT_2
zf-RING_2
zf-C3HC4
zf-RING_UBOX
zf-HC5HC2H_2
zf-C3HC4_3
zf-RING_6
zf-C3HC4_4
zf-RING_5
zf-RING_10
RTT107_BRCT_5
zf-rbx1
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
111496720
NCBI-ProteinID:
XP_023002972
UniProt:
A0A6J1KL36
LinkDB
All DBs
Position
Unknown
AA seq
1108 aa
AA seq
DB search
MGDFSHLEKMGRELKCPICLSLLNSAATLGCNHVFCYVCIEKSMKSASNCPVCKVPYRRR
EVRPAPHMDNLVSIYKSMEAASGMNIFISQNLSSAELSDGENQVEGDGKGSKRHNAETIE
FIAYEQSTLEKEPQRTRKSKRKNSACSPVKPSFPRKKRVQVPQCPLSETPTRSAKLVHSF
NKENEEPRKSAVASENKGQPVLSPFFWLRERDEDEKSNQQYDMDQPTESMTMNVLSFSDI
KDSLDESPSKPSMEEVCDKPSYDLDLFDSEMFEWTQRACSPEICLSPLKLQVEDIDRTEI
ALLAAAPNEEPRVQNLNGSSNHSGGIPDELVVPDVSLLEDNSTKDHTGSAKLSKRGRKRK
ETALRKCAKRLGESAIDNYSHSGMETECLLQKQEHHVSNSSDNLKNVTKRSKRKTHRGFD
ANKMTLENVPDDPINLATPNENFGTGTSGFPEVEKVSQFPEKSHKNGRACKKTHFSRDAK
QATPENAIADPVSLGAPDDEHENFGTEMLALPEVEKVCQLPENSRMKGRGRKKAHFGNDG
NMTILEDVPAHPIGLGTPNDGSRNFGTEVSAFQEIEKVSQFPEKNNKNGGAGKDQRLVQY
RRKSKKQKLYSGDDKLREKQSFNQNQQDGCAIPDLTTTPEIATSTDNKREHEKQDKSSSV
CIITSEYDNVTQEKHVAQENRSELSEIFPCCTDTKNLDPMAKKVGSGKHERLDNEFYCAF
CLSSEESEASGRMVHYFNGKPIDTDDVKNSKVVHAHWNCVEWAPNVYFDDDTAINLEAEL
SRSRRIKCGFCGNKGAALGCYEKCCRKSFHVPCAKLMPQCQWDTENFVMLCPLHPDSKLP
SQCLGHQERKRSCAPKRQLNTNCIAVAREISNSRVFTFRESSKKLVLCCSALTTAEREAV
DEFQRLSGVPMLQKWDDSVTHIIASTDENEACKRTFKILMGILKGKWVLSLKWIRACIQA
MEQIEEERFEITLDVHGIRDGPQLGRLRVLNNQAKLFSGFKFFFTADFLPSYKGYLQQLV
TAAGGTILLRKPVSSNQNTPCSSPNCQVFIIYSLEIPDHCDPGERSKILNYRRSDAESLA
KSAAAKVATNLWLLNSIAGSKLSSRLVE
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgggggatttcagtcacctggagaagatgggaagagagctcaaatgcccaatttgtttg
agtcttttaaactctgccgcgacactgggatgcaaccacgtattctgctatgtatgtata
gagaagtcaatgaaatcggcttcaaactgcccagtttgtaaggtgccttatcggcgtaga
gaagttcgtcctgctccacacatggataatttggtgagcatttacaaaagcatggaagct
gcttcgggaatgaatatatttatttctcagaatttgtcttctgctgagttatctgatgga
gagaatcaagtggaaggtgatggcaaaggttcaaaacggcataatgcagaaaccatcgag
ttcatagcttatgaacaaagtactttggaaaaagagccacaaaggacacgaaaatccaag
cggaagaattctgcttgttcccctgtgaaaccttcatttccaagaaagaaaagggttcag
gtgccgcagtgtcccctttcagaaacacctacccgatctgcaaagttagtacatagtttt
aacaaggagaatgaagaaccgagaaaaagtgcagttgcttcggagaataaaggtcagcca
gtgctttcgccttttttttggttgagagaaagagatgaagatgaaaagtcaaatcaacag
tatgatatggatcagcctacggaatcaatgacaatgaacgttctttccttcagtgatatt
aaggattcactggatgaaagcccttcaaagccttcaatggaggaagtgtgcgacaagcca
tcctacgacttggatctctttgatagtgaaatgtttgaatggactcaaagggcctgttcc
cccgaaatttgtttaagtccccttaaactgcaggttgaagatattgacagaactgaaata
gcattattagcagcagcacctaatgaagaacctagggttcaaaatctaaatggaagttct
aatcacagtggtggtataccggacgagttggtggtacctgatgtgtcccttctagaagac
aacagtacgaaggatcatactggaagtgctaaactcagcaaaagaggtagaaagagaaag
gaaactgcactgaggaaatgtgctaaaagattgggagaatcagccattgacaattattcc
cattcaggtatggaaaccgaatgcttgcttcaaaagcaggaacaccatgttagtaacagc
tctgataatctgaaaaatgttaccaaaaggagcaagaggaaaacgcaccgtggttttgat
gcaaataagatgactcttgaaaatgttcctgacgatccaattaatttagccactccaaat
gagaattttggaaccgggacatcaggctttccagaagtggaaaaggttagtcaattcccg
gaaaagagtcacaagaacggcagagcctgcaagaaaacgcacttcagtagggatgccaaa
caggcgactccagagaatgctattgccgatccagttagtttaggagctccagatgatgaa
cacgagaattttggaaccgagatgttagctttaccagaggtcgaaaaggtttgtcaatta
cctgaaaatagtcgcatgaaaggcagaggcaggaagaaagcacacttcggtaacgatgga
aatatgacgattcttgaagacgttcctgcacatcccattggtttaggaactccaaacgat
ggttctcggaattttggaactgaggtatcagcttttcaagaaatcgaaaaggttagtcaa
ttcccagaaaaaaataacaagaatggtggagccggcaaagaccagagattggtccaatac
cgcaggaagtctaagaaacaaaaattatattcaggggacgacaaactgcgagagaaacaa
tctttcaatcagaaccaacaagatggttgcgccattcctgatttgaccaccacacccgaa
attgctacttctactgataacaaaagggaacatgagaaacaagataaaagttcctctgtt
tgcataataactagtgagtatgataacgtcactcaagaaaagcatgttgctcaggaaaat
cgaagtgagctctctgaaatttttccatgctgtaccgacacaaaaaacctggatcctatg
gccaaaaaagttggttcaggaaaacatgaaagattggataatgaattttattgtgctttc
tgtctctcatcagaagagtcagaggcttctggaagaatggtccactatttcaatggaaag
ccgattgatacagatgacgtaaaaaactcaaaggtcgtacatgcacactggaattgtgtt
gaatgggcgcccaatgtttactttgatgatgacacagcgattaaccttgaagctgaactc
agtagaagtcgaagaattaaatgtggtttctgtggaaacaagggtgctgctcttgggtgt
tatgagaagtgttgtcgtaagagctttcacgttccttgtgcaaagttgatgcctcaatgt
caatgggatactgaaaattttgtgatgttatgcccacttcatccagattctaaactgcca
agccaatgtttgggacatcaagaacggaaaagaagttgcgctcctaagcgacaattgaac
actaactgtatagcagttgcgcgtgagatcagcaatagtagagtgtttacatttcgtgaa
tcatctaagaaattggttctgtgctgttcagctctcaccacagcagagagggaagctgtt
gatgagtttcagagattatctggagttccaatgttacaaaaatgggatgatagcgttaca
catattattgcatcaacagatgaaaatgaagcatgtaaaagaaccttcaaaattttgatg
ggcattttgaagggaaaatgggtactgagtctgaaatggattagggcttgtatacaagcc
atggagcaaatagaggaagaacgctttgagattactctagatgtgcatggaatcagagat
ggccctcaacttggaagattgagagtcctgaacaatcaagcaaaacttttttctgggttc
aagttcttctttacagcggatttcttaccttcatacaaaggatatctccaacaacttgtt
actgcagctggaggaactattctgcttagaaaaccagtttcaagcaatcaaaacacccct
tgttcttcacctaattgccaagttttcatcatttacagtcttgagattcctgatcattgc
gatccaggtgaaaggagtaagattctcaattacagacgttccgatgccgagtcgcttgct
aagtcggctgcagccaaagttgcaaccaatctatggcttttgaactcgattgcaggcagt
aaattgagcagtcgtcttgtggagtaa
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integrated database retrieval system
