Cavia porcellus (domestic guinea pig): 100717988 Help Entry 100717988         CDS       T07777                                  Symbol Hdac6 Name (RefSeq) histone deacetylase 6 isoform X1   KO K11407   histone deacetylase 6 [EC:3.5.1.98] Organism cpoc  Cavia porcellus (domestic guinea pig) Pathway cpoc04613   Neutrophil extracellular trap formation cpoc05014   Amyotrophic lateral sclerosis cpoc05034   Alcoholism cpoc05203   Viral carcinogenesis Brite KEGG Orthology (KO) [BR:cpoc00001]  09150 Organismal Systems   09151 Immune system    04613 Neutrophil extracellular trap formation     100717988 (Hdac6)  09160 Human Diseases   09161 Cancer: overview    05203 Viral carcinogenesis     100717988 (Hdac6)   09164 Neurodegenerative disease    05014 Amyotrophic lateral sclerosis     100717988 (Hdac6)   09165 Substance dependence    05034 Alcoholism     100717988 (Hdac6)  09180 Brite Hierarchies   09181 Protein families: metabolism    01009 Protein phosphatases and associated proteins [BR:cpoc01009]     100717988 (Hdac6)   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:cpoc03019]     100717988 (Hdac6)    04131 Membrane trafficking [BR:cpoc04131]     100717988 (Hdac6)    03036 Chromosome and associated proteins [BR:cpoc03036]     100717988 (Hdac6) Enzymes [BR:cpoc01000]  3. Hydrolases   3.5  Acting on carbon-nitrogen bonds, other than peptide bonds    3.5.1  In linear amides     3.5.1.98  histone deacetylase      100717988 (Hdac6) Protein phosphatases and associated proteins [BR:cpoc01009]  Protein serine/threonine phosphatases   Phosphoprotein phosphatases (PPPs)    Protein phosphatase-1     PP1-interacting proteins (PIPs)      100717988 (Hdac6) Messenger RNA biogenesis [BR:cpoc03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Stress granule specific factors      100717988 (Hdac6) Membrane trafficking [BR:cpoc04131]  Autophagy   Aggrephagy    Other aggrephagy associated proteins     100717988 (Hdac6) Chromosome and associated proteins [BR:cpoc03036]  Eukaryotic type   Histone modification proteins    HDACs (histone deacetylases)     Class II HDACs      100717988 (Hdac6) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Hist_deacetyl zf-UBP zf-UBP_var Motif Other DBs NCBI-GeneID:  100717988 NCBI-ProteinID:  XP_003462634 Ensembl:  ENSCPOG00000008955 UniProt:  H0VDJ2 LinkDB All DBs Position Unknown AA seq 1159 aa AA seqDB search MSSTGQDSTTTRHRRSRHNPQSPLHDSSVTSKRNTKKGAVPRSSPNLAEVKKKGKMKKLS QAVEDDLIIGFQELDVNPEAKIAVGTGLVFDEQLNEFHCLWDDSFPERPERLHAIKEQLM QEGLLDRCVSFQARFAEKEELMLVHSLEFIDLMETTQYMNEGELRVLADTYDSVYLHPNS YTCACLASGSVLRLVDAVLGAEIRNGMAIVRPPGHHAQHSLMDGYCMFNHVAVAARYAQK KHRIQRVLIVDWDVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQG QGYTINVPWNEVGMRDADYIAAFLHILLPVAFEFQPQLVLVAAGFDALQGDPKGEMAATP AGFAQLTHLLMGLAGGKLILSLEGGYNLHSLAEGVSASLHILLGDPCPMLESPGAPCPSA QASISCTLEALEPFWQILVRPAETPEEDSVEDGVQEIEEEGPWVPSVLPILTWPLAQART GLVYDQRMMNHCNVWDSHHPETPQRILRIMRHLEELGLAGRCVTLPVRPATEAELLTCHS AEYVERLRATEKMKTRELHREGANFDSIYICPSTFTCAQLATGAVCCLVEAVLSGEVLNG VAVVRPPGHHAEQDAACGFCFFNSVAVAARHAQAISGRTMRILIVDWDIHHGNGTQHIFE DDPSVLYVSLHRFDRGTFFPMGDEGASSQVGRAAGTGFTVNVAWNGPRVGDAEYLAAWHR LVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMGLANGRIILVLEGG YNLTSISESMAACTHALLGDLPPQLPLLRPPQSGALASITETIQVHHRYWRSLRVTKVED KEGLSSSKSVTKKVPQQANPGLAKGMTMPKEKVLEVDMRKATSALPAEESTDQTKPEAAN VTLTPDQSSETATRRAALDKAPSEETVEEAPVHQATSEAATGAVVMHPTTSEEAEGGAEL IQTPQASYTENQFPAASPVLGATALLSPSQLTGDPGTLELGGEALETLEPQALEEESLLG EAAGGQDVADLKLTQRFQDLAEINQGILYAVTPLPWCPHLVAVRPIPAASLDVTQPCEDC GTCQENWVCLSCYQVYCSRYINAHMVRHHEASGHPLVLSYVDLSTWCYPCQAYVHHQDLL DVKNITHQKKFGEDMPHPH NT seq 3480 nt NT seq  +upstreamnt  +downstreamnt atgagctccactggccaggattccactacaaccaggcatcgaaggagtaggcacaacccc cagtcacctcttcacgactccagcgtcacttcgaagcgaaataccaagaagggtgctgta ccccgctccagccccaatctagcagaggtgaaaaagaagggcaaaatgaagaaactcagc caagcagtggaagatgatctaatcatagggtttcaagagctggatgtgaatcctgaggcc aagattgccgtgggcaccgggctggtgtttgatgagcagctaaatgaattccactgcctc tgggatgacagctttcctgaacgtcctgagcgactccatgccatcaaggagcagctgatg caggaaggcctcctggatcgctgtgtgtcctttcaggcccgctttgctgaaaaggaagag ctgatgttggttcacagcctggagtttattgatctgatggaaacgacccagtacatgaat gaaggagaactccgagtactagcagatacatacgactcagtttatctgcatccgaactcg tacacttgtgcctgcctggcctcaggctctgtcctcaggcttgtggatgcagtcttgggg gctgagatacggaatggcatggccatcgtcaggcctcctggacaccatgcccagcacagt cttatggatgggtattgcatgttcaatcacgtggctgtggctgcccgctatgctcaaaag aagcaccgcatccagagggtccttatcgtggattgggatgtgcatcatggtcaaggaaca caattcacttttgaccaggaccccagtgtcctttatttttccatccatcgctatgagcag ggtcggttctggccccaccttaaggcctctaactggtctactacaggttttggccaaggt caaggctacaccatcaatgtaccttggaatgaggtggggatgcgggatgctgactacatt gctgcttttctgcacatcctgctaccagttgcctttgagttccagcctcagctggtccta gtagctgctggatttgatgccctacaaggggatcccaagggtgagatggccgccactcca gcagggtttgcccagctaacccacctgctcatgggtctggcaggaggcaagctgatcctg tctctggagggtggctacaacctccattccctggctgagggtgtcagtgcatcactccac atccttctgggagatccttgccccatgctggagtcccctggtgctccctgcccaagtgcc caggcttcaatctcctgcaccctggaagctcttgagcccttctggcagattcttgtgaga ccagcagagaccccagaggaggacagtgtggaggatggtgtgcaggagatcgaagaggaa ggaccttgggtgccctccgtgctgccaatcctgacctggcccttggcgcaggctcgaact gggctcgtttatgaccagcggatgatgaatcactgcaacgtatgggacagccaccatcct gagacaccccagcgcatcctgcggatcatgcgccacctggaggagctgggcctcgctggg cgctgcgtcaccctgcctgtgcggcccgccacagaagcggagttgctcacttgccacagt gctgagtatgtggagcgcctacgggccactgagaagatgaaaacccgggaactgcaccgt gaaggcgccaacttcgactccatctacatctgccccagcaccttcacctgtgcacagctt gctacaggcgctgtctgctgccttgtggaggccgtgctgtccggagaggttctaaatggt gttgctgtggtgcgccccccagggcaccatgcagagcaggatgctgcgtgtggtttctgc tttttcaactctgtggctgtggctgctcgacatgcccaggccatcagtgggcgtaccatg cggatcctgatcgtggattgggacatccaccatggtaatggaactcaacacatatttgag gatgaccccagcgtgctatatgtgtccctgcaccgatttgaccgaggtaccttctttccc atgggggacgagggtgccagcagccaggtaggcagggctgcaggcacaggcttcactgtc aacgtggcctggaatgggccccgcgtgggtgatgctgagtacctggcagcctggcatcgc ctagtgcttcccattgcctatgagtttaacccagaactggtgctggtctcagctggcttt gatgctgcacgaggggacccattagggggctgccaggtgtcacctgaaggttatgcccac ctcacccacctgttgatgggccttgcgaatggtcgaattatccttgtcctagagggtggc tacaatctgacatccatctcagaatccatggctgcctgtactcatgcacttcttggagac ctgccacctcagctgcctctgctgcggcctccacagtctggggccctggcctccatcact gagaccatccaagtccatcacagatactggcgcagcctacgggtcacaaaggtagaagac aaggaaggactctccagttctaagtcagtcaccaagaaggtgccccagcaagccaatcct gggttggctaaagggatgaccatgccaaaagagaaagttctagaagtggacatgaggaag gcaacctcagcattacctgcagaagagtccacagaccagactaaaccagaggcagctaat gtgacgctcactccagaccagtcctcagagacagccaccaggagagccgccctggacaag gccccctcagaggagactgtggaagaagccccagtgcaccaggccacctccgaggcagct acaggggcagtagtgatgcacccgactacttcagaggaggctgagggaggagctgagctg atccagactcctcaagcctcatatacagaaaatcagttcccagcagcctcacctgtgctg ggagccacagctctgctgtcccccagtcagctgactggggatcctgggaccttggaacta ggcggggaagctctggagaccctggaacctcaggccctagaagaggagagcctactagga gaggcagctggaggtcaggatgtggctgacttgaagctgacacagagatttcaggacctt gctgaaattaaccagggcatattatatgctgtgacaccactgccctggtgtccccatttg gtggcagtacgtcccatccctgcagcaagtctggatgtgacccaaccttgtgaggactgt ggaacatgccaggagaactgggtgtgtctgtcctgctatcaggtctactgcagtcgttac atcaacgctcatatggtccgacaccatgaagcctctgggcacccgctggtcctcagctac gtcgacctgtctacctggtgttacccctgtcaggcctatgtccaccaccaggatctccta gatgtgaagaatatcacccaccagaagaagttcggggaggacatgccccacccacactaa

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