Cavia porcellus (domestic guinea pig): 100731860
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Entry
100731860 CDS
T07777
Symbol
Bard1
Name
(RefSeq) BRCA1-associated RING domain protein 1 isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100731860 (Bard1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpoc03019
]
100731860 (Bard1)
04121 Ubiquitin system [BR:
cpoc04121
]
100731860 (Bard1)
03036 Chromosome and associated proteins [BR:
cpoc03036
]
100731860 (Bard1)
03400 DNA repair and recombination proteins [BR:
cpoc03400
]
100731860 (Bard1)
Messenger RNA biogenesis [BR:
cpoc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
100731860 (Bard1)
Ubiquitin system [BR:
cpoc04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
100731860 (Bard1)
Chromosome and associated proteins [BR:
cpoc03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
100731860 (Bard1)
DNA repair and recombination proteins [BR:
cpoc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
100731860 (Bard1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank
Ank_2
Ank_4
Ank_3
Ank_5
BRCT_2
BRCT
Motif
Other DBs
NCBI-GeneID:
100731860
NCBI-ProteinID:
XP_013013233
Ensembl:
ENSCPOG00000011499
LinkDB
All DBs
Position
Unknown
AA seq
633 aa
AA seq
DB search
MWFSPRSKKVRYVVQKVSVQTQPQKMKDGNTQQDAEYEFTSATPPTVVSKKTKKASRTCA
KKQKKKTLAEINEEWNLDAEKEGNELDPKEEVKEKQVSFCSQPAIIGSPQVNGEIDLLAS
GSVSESGSYGSFTGAFLPLAEHIESPESGSNNEVTLEEGCGNDLTSEMSLPLDCNGKRGH
SNRLSRPVSKKCRSSIPSTSGEIRQTGLSENIALLGCSPPASSKLQVDTVRRENDNRSDD
SISHSPCPLPSALSSSSYRRLMSSPSAVKVSPHDLMARKRNHRGETLLHIASIKGDTSSV
EYLLQNGSDPNVKDNAGWTPLHEACNHGHLKVVELLLRHQALVNTTGYQNDSPLHDAARS
GHLDIVRLLLSCGASRNAVNIFGLRPVDCTDNENMKSLLLLPEKNESCSTSRCSGVNVGQ
RRDGPLVLIGSGLSSEQQKMLGELAAMLKAKKCMEFDSTVTHVIISGDEAQTTLKCMLGI
LNGCWVLKFDWVKACLQRKVCDQEENYEIPEGPRRSRLNREQLLPKLFDGCYFYFGGNFK
HHPKDNLIRLVTAAGGQVLSRKPKPDSDVTQTINTVAYHADPESDQRFCTQYIIYEDLSN
YRPERVRQGKVWMAPSSWFINCVMSFRLLPLDN
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgtggtttagtcctcgaagtaagaaggtcaggtatgttgtgcagaaggtttcagtgcaa
acccagcctcagaagatgaaagatggaaacactcagcaagatgcagagtatgaatttact
tctgcaactccccctacagttgtttctaagaaaactaaaaaagcttccagaacatgtgca
aaaaagcaaaaaaagaaaactttagctgaaattaatgaagaatggaatttagatgcagag
aaggaaggcaatgagcttgatcccaaagaagaagttaaggaaaagcaggtgtcattctgt
agccagccagccattattggtagtccacaagtaaatggcgaaatagacttgcttgccagt
ggctcggtgtcggaatctggaagttacggaagcttcaccggggcctttctaccactggcc
gagcatatagagtctccagagagtggcagcaataatgaagtgacacttgaggaaggctgt
ggaaatgatcttacttctgagatgtctttgccattagattgtaatggaaaacgtggacat
agcaacagactttctaggcctgtttctaagaagtgtagaagcagtattccaagcaccagt
ggagagataaggcaaacagggctctcagaaaacatagcgttgcttggctgttcaccgccg
gcttcaagcaaacttcaagttgacacagtaaggagggaaaatgataatagatcagatgac
tccatcagccattcgccttgtccactaccttctgctctgagtagttccagttatagacga
ctgatgtcaagcccctctgcagtgaaggtgtccccccatgacttgatggccaggaaaaga
aatcacagaggagagactttgcttcatattgcttctataaagggtgatacatcgtccgtt
gagtatctcttgcaaaatggaagcgacccaaatgttaaggacaatgctggatggacccca
ttgcacgaagcctgcaatcacgggcacctcaaggtggtggagctgctgctgcggcaccag
gccctggtgaacaccactggctaccagaacgactcgccgctccacgatgcggcccggagc
gggcacctggacatcgtgaggctcttgctgtcctgtggcgcctccaggaatgctgttaac
atatttggtctgcggcctgtggattgtacagacaatgaaaatatgaagtcattattgctg
ctaccagagaagaatgaatcatgctcaactagccgttgttcaggagtgaatgtcgggcag
cgcagagatggaccacttgttctcatcggcagtgggctttcttcagaacaacagaaaatg
ctcggggagctggcagcaatgcttaaagctaaaaaatgcatggagtttgacagtacagtg
actcacgtcattatttctggtgatgaggctcagactactctcaagtgtatgctcgggatt
ctcaatgggtgctgggtcctgaagtttgactgggtgaaagcatgtctacaaagaaaagtc
tgtgaccaggaagaaaactatgaaattcctgaaggtccacggagaagcaggctcaacaga
gaacagctgttgcctaagctgtttgatggctgctacttctattttgggggaaacttcaag
catcacccaaaggataacctcattaggctggtcacagcagcaggaggccaggtcctcagc
agaaagcccaagccagacagtgatgtgacccagaccatcaacacggttgcctaccatgcc
gaccccgagtccgaccagcgcttctgcacgcagtatatcatctatgaggatttatctaat
taccgcccagaaagggtgcggcaaggcaaagtctggatggctccttccagctggttcata
aactgtgtgatgtccttcaggttacttcctctagacaactga
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