Cherax quadricarinatus (Australian red claw crayfish): 128689308
Help
Entry
128689308 CDS
T09502
Name
(RefSeq) LOW QUALITY PROTEIN: histone deacetylase 6-like
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
cqd
Cherax quadricarinatus (Australian red claw crayfish)
Brite
KEGG Orthology (KO) [BR:
cqd00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cqd01009
]
128689308
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqd03019
]
128689308
04131 Membrane trafficking [BR:
cqd04131
]
128689308
03036 Chromosome and associated proteins [BR:
cqd03036
]
128689308
Enzymes [BR:
cqd01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
128689308
Protein phosphatases and associated proteins [BR:
cqd01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128689308
Messenger RNA biogenesis [BR:
cqd03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
128689308
Membrane trafficking [BR:
cqd04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
128689308
Chromosome and associated proteins [BR:
cqd03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
128689308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
Motif
Other DBs
NCBI-GeneID:
128689308
NCBI-ProteinID:
XP_053633428
EnsemblRapid:
LOC128689308
LinkDB
All DBs
Position
22:4182020..4330711
Genome browser
AA seq
1932 aa
AA seq
DB search
MAKAQEGMKIVRGKTGVVYDERMAEHRCLWDENYPERPERLLHTLERCRELGLLNRCETL
VPRSATEEEVLKLHSPTHLAFLWSTKGEADYNKLEALSAHFDSIFLHPSTYENTLLAAGC
TLDLVDAVASGKLQNGFALIRPPGHHAMESEICGFCYINNVALAARHALEKHGLSRILIV
DWDVHHGQASQYAFYSDPRVLYFSIHRYEHASFWPHLRESNYNYVGEGAGRGFNFNVPLN
KTGMRNEDYLAIFHQILLPVAYEFNPELIIVSAGYDSAIGCFEGEMEVSPGFYGHLTSSL
MTLAQGRVAIVFEGGYCLDSLAEGAAMTLSILLGDSCPVLLDPIKEPSLSLRESLLNLIY
VQRPYWKCFQYQGSFSVQEESGETVKARHTPSLTFLGLDARPYKFPTRNIHAVQPPEQLE
KIRLKLTQLKQKERTKPLLEARLSLVYDEEMSSHKSLSEVEHPERPERTTKIWEYMNHYG
IINRANVLQSRRATREEVELVHTKEHVDFMYNMGSLSEEELKHLQDKYTSIYFHAMSNDA
ALLAVGSLLQVVDSVCSGETLSGIGVVRPPGHHAEHTHPYGFCFYNNVAIAAKYALRQYG
YQRVLILDWDVHHGNGIQHAFESNPHVLYISIHRYDHGLFFPSSEDANYDRVGTGAGEGY
NVNIPWNKSGLGDAEYISAMLQVVLPIAYQFDPQLVLVSAGFDAARGDPLGGCRVTPECY
GHMTHLLSSLAGGKIVLALEGGYNLNTISYCMTMCAKALLGDPMPLLEASLVPSKGAVQT
INDVIKTHSQYWSILCFQVDLPIEDVLCQGFGGGPQAVESGVSGSEVSSCASSPISTPST
NSPAYVSAPASPEKLNEKLQRESDAATPVDLIDIETKSCSEKLEVDSSPRSVRARIIDRK
NPSIEKEESSTNDIEEPSVDSNTSEIPLQTRAGQGGQSKKTRKRSGKQQGRIPSHERGNL
SRTPTRTRKSSWSEGALRAAASSIDKIKGPTAVISNQDYCDTSSLEYIEGAGNIKNIIKR
CSELNLLETCTKLKPRPATEAEILAVHNEETLKNIPRGAVYDDILTAAGSTVELIQEIVL
GRAQNGLAIIQSSGHLMSETSASSNICLNNIAFGTRYALDNLSLRRVLIIDWDGQHGNTT
QGIFDDDPRILVFSIHICSCQKPEENTFDKMREHRGQGYNFNVKLDCSVFQSDYYSIFYQ
LLLPVAYEFSPELVIVLAGYNLSLHSENIHPVIYSHLTSLLMLLAHGRLAVVVEVGRCKV
AMAEAVAAILRALQDKPFEHMPFVTNESSPEVKQVIIDALTTQKTNWSSLRHHAQTSSIA
CKQNVNSPIIRPCQHDYSSQIQILGNNILSPKNTVCLVYDDLMMEHFNYEDETYPERPER
ISCIYKRFQEFGIIDRCLEVKARKASEYELETAHSSKHINFMSTLKAKKPQELLCLQNKF
ESVYLHRCTNDAALVAAGSLLAAVDSVASGESQRGVAVVRPPGHHAERNKPCGFCFYNNV
AIAAKHAISSYGLQRILIMDWDVHHGNGIQLFXGNPRXLYISIHRYDNGKFFPASCDGNY
NKVGIKEGKGYNVNIPWNKRGMGDGEYMAAMLEVVLPIAYIQSPACMVPGFXAAVGDPLG
GCNVTPECYGHMTRLLTCLAEGRVIVALEGGYNLSTMSYCMTMCAKALLGDPLIPLAQNL
MPCTSATETLSSVVDVHRKFWSALNFKDEAKSAMGQISSPRRNGSTPAIQQGDYITSASS
HSSNKSSEGKCTGLEELTGNFSRVKLDDVATSVTAASCETKLPGNEITEEDMGAVGGSSG
VSAGGNITTFQLSEFATGEQMFAVVPRTWCPHLEEINRVPSSGLNTANPCEECQDSSENW
VCLTCYKVLCGRFVREHMLMHSLTEEHKMVLSYADLSVWCYACDDYVHHPILDEAKRVAH
LDKFGEDIPEYS
NT seq
5799 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaggctcaggagggtatgaagatagtccgtggcaagacaggggtggtgtatgat
gaacgcatggctgaacatcgctgcctctgggatgagaattaccctgagcgtcctgagagg
ctgttacacacactggaaaggtgcagagagcttggactacttaatcggtgtgagacttta
gtgccccgttctgcaacagaagaggaagtactgaagctccactcccctacacatcttgcc
tttctatggagcacgaaaggggaagctgattacaacaagcttgaagcactctctgcccac
tttgattccatttttcttcatccatcaacatatgagaacactctacttgctgctgggtgc
actttagatttggtggatgcagtagcatcaggaaaactacagaatggctttgctctgatc
agaccacctggccatcatgctatggagtcagagatctgtgggttctgctacataaacaat
gtggccttagcagctcgtcatgccttagaaaaacatggcttgtcacgcatcctcatagtt
gactgggatgtccaccatgggcaagcctcccagtatgcattttactcagaccccagagtg
ctctacttttctattcaccgctacgaacatgccagtttttggccccacctgcgggaaagt
aactacaactacgtaggtgaaggagctggccgaggcttcaatttcaatgttcccctcaac
aagactggcatgaggaatgaagactacttagccattttccatcaaattcttcttcctgtg
gcatacgagttcaatcctgagctcatcattgtttcggcagggtatgattctgcaattgga
tgttttgagggagaaatggaagtgtcaccaggcttctatggccacctcacctcaagttta
atgacactagcccagggaagagtggctatagtttttgagggaggctactgtctggactcc
ttagcagagggtgcagcaatgacactgagtatactgcttggagattcttgccctgtactg
ctggatcccatcaaggaaccatcactcagcttgagagagtcacttctaaatcttatttat
gtgcaacggccatattggaagtgcttccagtatcaggggtcattttcagtgcaagaagag
tctggtgagactgtcaaagcaaggcatactccttcccttacttttcttggccttgatgcc
agaccttacaaatttccaaccaggaatattcatgctgtgcagccacctgagcaattggag
aagataaggttaaaacttactcagctgaagcaaaaagaaaggactaaacctctgcttgaa
gctagactcagcttggtatatgatgaagagatgagcagtcataaaagtttgtctgaagtt
gaacatccagaaagacctgaaagaacaacaaaaatctgggagtacatgaatcactatggc
attataaaccgagcgaatgttctccagtcccgccgagctactcgggaagaagtggaactt
gtacataccaaagagcatgtagacttcatgtataacatggggtcattaagtgaagaggag
cttaagcacctgcaggataaatacacatctatatactttcatgccatgagcaatgatgca
gctctgctagctgttggtagtctcttacaggttgtggatagtgtgtgcagtggtgaaacc
ctaagtggcattggtgtagtgcgaccacctgggcaccatgctgagcacacccatccatat
ggtttctgtttttataacaatgttgctattgctgccaaatatgccctcagacagtatgga
taccaacgtgtgttaattttggactgggatgttcaccatggaaatggaattcaacatgcc
ttcgaatccaatccacatgtcctttacatctctattcaccgatatgaccatgggctcttc
tttccttcctctgaagatgcaaactatgaccgggttggcacaggtgcaggggaaggctat
aatgtcaacatcccatggaacaagagtggtttaggggatgcagaatatatatctgccatg
ctgcaggtagtgttacccattgcctaccagttcgatccccagctggtcctggtctctgct
gggtttgatgctgctcgtggagatccgttgggaggctgccgtgtgacccccgagtgttac
gggcacatgacacacctgctatcaagtcttgctgggggcaagattgtgttggcacttgaa
ggtggttacaacctcaacaccatcagttactgcatgaccatgtgtgctaaggctctccta
ggtgacccgatgccattattggaggcatcgcttgtcccaagtaaaggtgctgtgcagacc
atcaatgatgttatcaagactcattcacaatattggtctattctctgtttccaggttgat
cttccgatagaggatgttctttgtcaaggatttggaggtggaccacaagcagttgaatct
ggtgtgtcaggttcagaggtatcatcttgtgcttcctcccctatttcaactccgtccact
aactcccctgcatatgtttctgctcctgcctcaccagaaaagttaaatgagaaattacag
cgtgagagtgatgctgccactccggtagacttgattgacattgagactaaatcatgttca
gaaaaattggaagtggattccagcccacgttctgtgagagcacgaataattgataggaag
aatccttcaattgaaaaagaggaaagcagcacaaatgacatagaggaacccagtgtagat
tctaacacttctgaaataccactacaaacaagagcaggccaaggtggacaatccaaaaaa
acaaggaaaagatcaggtaaacagcaaggaagaatacccagccatgaaaggggaaatctg
tcacggactcctacacgcactcgcaaatcttcctggagtgaaggagctttgcgtgctgct
gcatccagcattgataaaataaaaggtccaactgcagttatatccaatcaggattattgt
gatactagtagcttggaatatatagaaggtgctgggaacattaaaaacatcattaagcga
tgcagtgaactgaatttgttggagacatgcaccaaactcaaaccaagacctgccactgag
gcagagatattggctgttcacaatgaggaaacattaaaaaatattcccagaggagcagtt
tatgatgatattttaactgctgctggaagcactgtagaactgattcaggaaatagtcttg
ggaagagcacagaatggtttggctattatacagtcatcaggtcacttgatgtcagaaact
agtgcatcttccaacatctgcttgaataacattgcttttgggactcgctatgcactggat
aatttgagccttagacgggtgctaataatcgattgggatggtcagcatggcaatactaca
cagggcatctttgatgatgatccacgtatcttggtgttttctatacacatatgcagttgt
caaaagccagaagagaatacttttgataaaatgagagaacatagaggacaaggctacaat
ttcaatgttaaattagattgcagtgtatttcagagtgattactattcaatcttttatcag
ctgctgttgccagtagcatacgaattttctcctgaactcgttatagtcttggctggttac
aacttatcactacactcggaaaacattcatccagtaatttattcacatttgacgagtttg
ctcatgcttttagcacatggccgccttgcagtagttgtagaggttgggagatgcaaagtg
gctatggcagaagcagtggcagctatattacgtgcactccaggataaaccctttgaacac
atgccattcgtaaccaatgaaagttctccagaagtaaaacaagtaataattgatgcattg
actacacagaaaacaaactggagcagtttaagacatcatgctcaaacatcatccatagca
tgcaaacaaaatgtgaattctcccatcatcaggccatgtcaacatgactactctagtcag
attcaaatacttggcaataatatcctaagcccaaagaataccgtttgccttgtatatgat
gacttaatgatggagcatttcaactatgaagatgagacatacccagagaggccagagaga
ataagctgcatttataagcgttttcaagagtttggcattattgaccgctgtcttgaggtc
aaggcaaggaaagcatcagaatatgagttggaaactgcacattcttccaagcacatcaat
ttcatgtcaacccttaaggctaagaaacctcaggaactcctgtgcttgcagaataaattt
gaatctgtttatcttcaccgctgcaccaatgatgctgctcttgttgctgcaggctcccta
cttgcggccgtggacagtgttgcctcaggtgaaagtcagcgtggggtagcagtggtacgt
cctcctggtcaccatgcagaaagaaataaaccatgtggcttctgcttttacaacaatgtg
gctattgctgccaaacatgctattagttcatatgggctgcagagaatactaatcatggat
tgggatgttcaccatgggaatggaattcaactgttttagggaaatcccaggngcctctat
atatcaatccatcgctatgacaatggaaagttcttcccagccagttgtgatggaaactac
aataaagtaggcataaaggaagggaagggatacaatgtgaatatcccatggaacaagaga
gggatgggtgatggtgaatacatggcagccatgctggaggtggtgctgcctattgcttac
attcaatccccagcttgtatggttcccggctttnttgctgctgttggggatcctcttggt
ggatgcaacgtgacaccagagtgttacggccacatgacaaggttgctgacgtgcttagct
gagggtcgcgttattgtggctttggagggtggttataatctgagtaccatgagctactgc
atgactatgtgtgccaaggctctgcttggagaccctctcattcctctggctcagaattta
atgccttgtactagtgctacagaaacactgagcagtgttgttgatgtacatagaaaattt
tggtcagcactaaactttaaggatgaagctaaatcagccatgggtcaaatttcatcgccc
agaaggaatggaagtacaccagccatccaacaaggggattacattacctcagcttcttca
cactcttcaaataagagctctgaaggaaagtgtacaggattggaagagctgactggcaac
tttagccgagtaaaactggatgacgtggccacaagtgtaacagcagcctcttgtgaaact
aagctaccaggaaatgagatcacagaagaagacatgggtgctgtgggaggatcttctgga
gtctcagcaggtggaaacatcactactttccagctgtctgaatttgctactggtgagcaa
atgtttgcagtggttccaagaacatggtgtccccatcttgaagaaattaatcgtgtgcct
agtagtgggttgaacactgctaacccatgtgaagaatgtcaagattcatcagagaactgg
gtctgtcttacttgctacaaggtattatgtggaaggtttgtgagagagcacatgctgatg
cacagcttaacagaggaacacaagatggtgctaagctatgctgacctgtctgtctggtgc
tatgcctgtgatgattatgtccaccatccaatcttggacgaggcaaaacgtgtagctcat
ctggacaagtttggagaagatattcctgagtattcataa
DBGET
integrated database retrieval system
