Chlorocebus sabaeus (green monkey): 103231941
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Entry
103231941 CDS
T04361
Symbol
HDAC6
Name
(RefSeq) histone deacetylase 6
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
csab
Chlorocebus sabaeus (green monkey)
Pathway
csab04613
Neutrophil extracellular trap formation
csab05014
Amyotrophic lateral sclerosis
csab05034
Alcoholism
csab05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
csab00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
103231941 (HDAC6)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
103231941 (HDAC6)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
103231941 (HDAC6)
09165 Substance dependence
05034 Alcoholism
103231941 (HDAC6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csab01009
]
103231941 (HDAC6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csab03019
]
103231941 (HDAC6)
04131 Membrane trafficking [BR:
csab04131
]
103231941 (HDAC6)
03036 Chromosome and associated proteins [BR:
csab03036
]
103231941 (HDAC6)
Enzymes [BR:
csab01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
103231941 (HDAC6)
Protein phosphatases and associated proteins [BR:
csab01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
103231941 (HDAC6)
Messenger RNA biogenesis [BR:
csab03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
103231941 (HDAC6)
Membrane trafficking [BR:
csab04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
103231941 (HDAC6)
Chromosome and associated proteins [BR:
csab03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
103231941 (HDAC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
103231941
NCBI-ProteinID:
XP_007989808
Ensembl:
ENSCSAG00000013197
LinkDB
All DBs
Position
X:45927625..45951636
Genome browser
AA seq
1257 aa
AA seq
DB search
MEKKGQGARVPTGRQKLGGASQGRSLRKGLRPNRGRGQASSTMTSTGQDSTTTRQRRSRQ
NPQSPPQDSSVTSKRNIKKGAVPRSIPNLAEVKKKGKMKKLGQAMEEDLIAGLQGMDLNL
EAEALAGTGLVLDEQLNEFHCLWDDSFPEGPERLHAIKEQLIQEGLLDRCVSFQARFAEK
EELMLVHSLEYIDLMETTQYMNEGELRVLADTYDSVYLHPNSYSCACLASGSVLRLVDAV
LGAEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHRIRRVLIVDWDVHHGQ
GTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVGMRDAD
YIAAFLHVLLPVALEFQPQLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMGLAGGKL
ILSLEGGYNLRALAEGVSASLHTLLGDPCPMLESPGAPCRSAQASVSCALEALEPFWEVL
VRSTETVEGDNMEEDNVEENEEEGPWEPPLLPILTWPVLQSRTGLVYDQSMMNHCNLWDS
HHPEVPQRILRIMCRLEELGLAGRCLTLTPRPATEAELLTCHSAEYVGHLRATEKMKTRE
LHRESSNFDSIYICPSTFACAQLATGAACRLVEAVLSGEVLNGAAVVRPPGHHAEQDAAC
GFCFFNSVAVAARHAQAISGRALRILIVDWDVHHGNGTQHMFEDDPSVLYVSLHRYDHGT
FFPMGDEGASSQIGRAAGTGFTVNVAWNGPRMGDADYLAAWHRLVLPIAYEFNPELVLVS
AGFDAARGDPLGGCQVSPEGYAHLTHLLMGLASGRIILILEGGYNLTSISESMAACTRSL
LGDPPPLLTLPRPPLSGALASITETIQVHRRYWRSLRVMKVEDREGPSSSKLVTKKAPQP
AKPRLAERMTTREKKVLEAGMGKITSASSGEESTPGQTKSETAVVALTQDQSSEAATGGA
TLAQTISEAAVGGAMLGQTTSEEAVGGATPDQTTSEKTVGGATLDQTTSEDAVGGATQGQ
TTSEEAVGGATLAQTTSEAAMEGATLDQTTSEKAPGGTELIQTPLASSTDHQTPPTSPVQ
GTTPQISPSTLIESLRTLELGSKSQGASESQAPGEENLLGEAAGGQDMADSMLMQGSRGL
TDQAIFYAVTPLPWCPHLVAVCPIPAAGLDVTQPCGDCGTIQENWVCLSCYQVYCGRYIN
GHMLQHHGNSGHPLVLSYIDLSTWCYYCQAYVHHQALLDVKNIAHQNKFGEDMPHPH
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagaaaggccagggcgctcgcgtccccacgggtcgccagaaacttggcggagcg
agccaagggcggagtttgagaaaggggctgcgtccaaaccgcggcaggggtcaagcctcc
tcaactatgacctcaaccggccaggattctaccacaaccaggcagcgaagaagtaggcag
aacccccaatctccccctcaggactccagtgtcacttcgaagcgaaacattaaaaaggga
gccgttccccgctccatccccaatctagcggaggtaaagaagaaaggcaaaatgaagaag
ctgggccaagcaatggaagaagacctaatcgcgggactgcaagggatggatctgaacctt
gaggctgaagcactggctggcactggcttggtgttggatgagcagttaaatgaattccat
tgcctctgggatgacagcttcccggaaggccctgagcggctccatgccatcaaagagcaa
ctgatccaggagggcctcctagatcgctgtgtgtcctttcaggcccggtttgctgaaaag
gaagagctgatgttggttcacagcctagaatatattgatctgatggaaacaactcagtac
atgaatgagggagaactccgcgtcctagcagacacttacgactcagtttatctgcatccg
aactcatactcctgtgcctgcctggcctcaggctctgtcctcaggctggtggatgcggtc
ctgggggctgaaatccggaatggcatggccatcattaggcctcctggacatcacgcccag
cacagtcttatggatggctattgcatgttcaaccacgtggctgtggcagcccgctatgct
caacagaaacaccgcatccggagggtccttatcgtagattgggatgtgcaccacggtcaa
ggaacacagttcaccttcgaccaggaccccagtgtcctctatttctccatccaccgctat
gagcagggtaggttctggccccacctgaaggcctctaactggtccaccacaggtttcggc
caaggccaaggatataccatcaatgtgccttggaaccaggtggggatgcgggatgctgac
tacattgctgctttcttgcacgtcctgctgccagtcgccctcgagttccagcctcagctg
gtcctggtggctgctggatttgatgccctgcaaggggaccccaagggtgagatggccgcc
actccggcagggttcgcccagctaacccacctgctcatgggtctggcaggaggcaagctg
atcctgtctctggagggtggctacaacctccgcgccctggctgaaggtgtcagtgcttcg
ctccacacccttctgggagacccttgccccatgctggagtcacctggtgccccctgccgg
agtgcccaggcttcagtctcctgtgctctggaagcccttgagcccttctgggaggttctt
gtgagatcaactgagactgtggagggggacaacatggaggaggacaatgtagaggagaat
gaggaggaaggaccctgggagccccctttgctcccaatcctgacgtggccagtgctacag
tctcgcacagggctggtctatgaccaaagtatgatgaatcactgcaacttgtgggacagc
caccaccctgaggtaccacagcgcatcttgcggatcatgtgccgtctggaggagctgggc
cttgctgggcgctgcctcaccctgacaccgcgccccgccacagaggctgagctgctcacc
tgccacagtgctgagtacgtgggtcatcttcgggccacagagaaaatgaaaacccgggag
ctgcaccgtgagagttccaactttgactccatctacatctgccctagtaccttcgcctgt
gcacagcttgccactggcgctgcctgccgcctggtggaggctgtgctctcgggagaggtt
ctgaatggtgctgctgtggtgcgtcccccaggacaccacgcggagcaggatgcagcttgc
ggtttttgctttttcaactccgtggctgtggctgctcgccatgcccaggctatcagtggg
cgtgccctgcggatcctgattgtggattgggatgtccaccatggtaatggaactcagcac
atgtttgaggatgaccccagtgtgctatatgtgtccctgcaccgctatgatcatggcacc
ttcttccccatgggggatgagggtgccagcagccagatcggccgggctgctggcacaggc
ttcaccgtcaacgtggcatggaacgggccccgcatgggtgacgctgactacctagctgcc
tggcatcgcctggtgcttcccattgcctacgagtttaacccagaactggtgctggtctca
gctggctttgatgctgcacggggggacccgctggggggctgccaggtgtcacctgagggt
tatgcccacctcacccacctgctgatgggccttgccagtggccgcattatccttattcta
gagggtggctataacctgacatccatctcagagtccatggctgcctgcactcgctccctc
cttggagacccgccacccctgctgaccctgccacggccccctctatcaggggccctggcc
tcaatcactgagaccatccaagtccatcgcagatactggcgcagcttacgggtcatgaag
gtagaagacagagagggaccctccagttctaagttggtcaccaagaaggcaccccaacca
gccaaacctaggttagctgagcggatgaccacacgagaaaagaaggttctggaagcaggc
atgggaaagatcacctcggcatcatctggggaagagtccactccaggccagactaagtca
gagacagctgtggtggccctcactcaggaccagtcctcagaggcagccacagggggagcc
acactggcccagaccatctctgaggcagccgttgggggagccatgctgggccagaccacc
tcagaggaggctgtcgggggagccactccggaccagaccacctcagagaagactgtggga
ggagccactctggaccagaccacctcagaggatgctgttgggggagccacgcagggccag
actacctcagaggaggctgtaggaggagctacactggcccagaccacctcggaggcagcc
atggagggagccacactggaccagactacgtcagagaaggctccagggggcaccgagctg
atccaaactcctctagcctcaagcacagaccaccagacccccccaacctcacctgtgcag
ggaactacaccccagatatctcccagtacactgattgagagtctcaggaccttggagcta
ggcagcaaatctcagggggcctcagaatctcaggccccaggagaggagaacctactagga
gaggcagctggaggtcaggacatggctgattcgatgctgatgcagggatctaggggcctc
actgatcaggccatattttatgctgtgacaccactgccctggtgtccccatttggtggca
gtatgccccatacctgcagcaggcctagacgtgacccaaccttgtggggactgtggaaca
atccaagagaattgggtgtgtctctcttgctatcaggtctactgtggtcgttacatcaat
ggccacatgctccaacaccatggaaattctggacacccgctggtcctcagctacatcgac
ctgtcaacctggtgttactactgtcaggcctatgtccaccaccaggctctcctagatgtg
aagaacatcgcccaccagaacaagtttggggaggatatgccccacccacactaa
DBGET
integrated database retrieval system