Camelina sativa (false flax): 104722957
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Entry
104722957 CDS
T05044
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 1 homolog
KO
K10683
BRCA1-associated RING domain protein 1
Organism
csat
Camelina sativa (false flax)
Pathway
csat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104722957
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104722957
04121 Ubiquitin system [BR:
csat04121
]
104722957
03036 Chromosome and associated proteins [BR:
csat03036
]
104722957
03400 DNA repair and recombination proteins [BR:
csat03400
]
104722957
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
104722957
Ubiquitin system [BR:
csat04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
104722957
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
104722957
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
104722957
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
BRCT_2
zf-HC5HC2H
zf-C3HC4_2
zf-RING_UBOX
zf-HC5HC2H_2
zf-RING_2
zf-C3HC4
RTT107_BRCT_5
zf-C3HC4_3
zf-C3HC4_4
zf-RING_5
zf-RING_6
zf-RING_10
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
104722957
NCBI-ProteinID:
XP_010439526
LinkDB
All DBs
Position
11:complement(11809168..11813648)
Genome browser
AA seq
941 aa
AA seq
DB search
MADTSHLEKMGRELKCPICLSLFNSAVSLSCNHVFCNACIVKSMKLDATCPVCKIPYHRR
EIRGAPHMDSLVSIYKNMEDASGVNLFVSQNNNQSPSDKEKHARDDSIEKAKDKNRQVSS
RKGRASKRKEYGKTKETELDAPGPIVMKPSSQTKKRVQLLQNLSSESLTKPTESTEIAGN
NKDYTDKTVIRLDEHPCLNKEGDLPPFFWLRDEVDGESSSQRTQSDQLLDTTPVNVPSFS
DLMDSDHESPPKADEQDKPNPGDMFDSEMFEWTQRPCSPEILPSPVKAKVPSKGEVDLTQ
KKLSKVALSKCKTLKAGSGRNTVARRSVGVSLVDNMESSAVAIISEKQDSRGTSGTITRN
DGSPDENVNAKRATRSKGQSSRVQSDLNVSKEAAGKQGTKRKRSSIKSSPAHPIEGSNEL
SLETEIVGKGDQDRAHSSYDTHPEKQSPTEKPTVKKRGRKSNASSILKDLSGKTQKKTSE
KRLKLDSHLISSKATQSDGNGILTDELNQVGDKQVSTNKTKCTVDKDNHSMQVLEKCSGM
NKSSSGGSAQLQRCDGPSTKKFACAFCHSSEDTEASGEMAHYHRGEPVSADFTGGSKVIH
VHKNCAEWAPNVYFNNFTAVNLDVELTRSRRISCTCCRLKGAALGCYNKSCKNSFHVTCA
KLIPECRWDNENFVMLCPLDASIKLPCEETNSKERKCKRAPKGPLHSEPNQVSKQTDIGE
LQSKHFRGSSKKLVLSCSGLTVEEKTVITEFAELSGLTISKKWEPTVTHVIASINENGAC
KRTLKFMMAILEGKWILTVDWIKACMLKKKIVSEEPYEITMDVHGIREGPYLGRQRALKK
KPKLFNGLQFYIMGDFEVAYKGYLQDVIVAAGGTILRRRPVSNIKDEASTIIVFGVEPSK
KKTLTQRRSDAEALAKSARARAASSSWVLDSIAGCQILDLI
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggcggacacaagtcatctggagaagatgggaagagaactcaagtgcccgatttgcttg
agtctatttaattcagcagtttcactttcgtgcaaccatgtcttttgcaatgcgtgtata
gtgaaatctatgaaactggatgctacttgcccagtttgtaaaatcccataccatcgtaga
gagattcgtggtgctcctcatatggatagcttggtgagcatttacaagaacatggaagat
gcttctggtgtcaacttattcgttagccagaataataatcaatcaccatcagataaagaa
aagcatgcgagagatgattccattgaaaaggcaaaagataagaatcgtcaggtatcatct
aggaagggccgagcatccaagaggaaagagtatgggaaaaccaaggaaacagaactagat
gcaccggggcctattgttatgaaaccttcatcccaaaccaagaaaagggtgcagctgctg
cagaatctatcttctgaaagtttaactaaacctactgagtctactgagatagctggaaat
aacaaggattacactgacaaaactgtcattcgtttggatgagcatccatgtctgaataaa
gaaggagatctgccacccttcttttggttgagagatgaggttgacggagagagttcaagt
caacgcacacaaagtgatcaacttttagatactacacctgttaatgttccctctttcagc
gatttgatggactcagatcatgagagcccgccgaaggcagatgagcaagataagcccaat
ccaggagacatgtttgacagcgaaatgtttgaatggactcagaggccttgttccccggag
attctacctagtcctgtgaaggccaaggtcccaagtaaaggtgaggttgatctcactcaa
aagaaactatctaaagtagcattatccaaatgtaaaaccctcaaagcaggaagtggaaga
aatacagttgcgagacgaagcgttggggtttcactggtggacaacatggaatcatctgca
gtagcaatcattagtgagaaacaagatagtcgtgggacttctggcacaataaccaggaat
gatgggagtcctgatgaaaatgtgaatgctaaaagggctacaagaagcaagggtcagagt
tcacgagttcagtctgatctaaatgtatccaaggaagcagctgggaaacaggggacaaag
aggaaaagatctagcattaaatcctctccagctcacccgatcgaaggatctaatgagctc
tcacttgaaacagaaattgtgggaaagggggatcaggatcgagcccatagttcatatgat
acacatcctgaaaaacaaagtcccaccgagaaacccactgtgaagaagaggggaaggaag
tccaatgcaagctcaattttaaaagatctatctgggaaaactcaaaagaagacttcagaa
aagagattgaaactagattcccatttgatctcaagcaaagctacacaatcggatggaaat
ggtatcctaactgatgagttgaatcaagtgggtgataaacaagtttcaacgaacaaaacg
aaatgcactgtagataaagacaatcatagcatgcaagttttggagaaatgctcagggatg
aacaagtcttcatctggaggtagtgcacagttgcaacgatgtgatggaccttcaacaaag
aaattcgcatgtgccttttgtcactcttcagaagacacagaggcttcaggagaaatggct
cactaccacagaggtgaacctgtctctgcagattttactggtgggtctaaagtcatacat
gttcacaaaaactgtgctgaatgggctccaaatgtatacttcaacaactttaccgcagtg
aatcttgatgtggagttgacaagaagccggagaataagttgcacctgctgtaggcttaaa
ggcgcagcacttggttgttacaataaaagttgcaagaatagttttcatgttacgtgtgca
aaattgataccagaatgcagatgggataatgaaaactttgtaatgctgtgccctttggat
gcatccattaagcttccctgtgaagagactaattcaaaagagagaaaatgcaagcgtgct
cctaaaggaccactgcactctgagcctaaccaagtttctaaacaaactgacatcggtgag
ctccagagcaagcatttccgtggatcatccaagaaattggtcttatcctgttcagggctc
acagtggaagagaagactgttataacagaatttgcggaactgtctggacttacaatctca
aaaaaatgggagccaactgttacacatgtcattgcatcaatcaatgaaaatggagcttgc
aaaaggaccctcaaatttatgatggcaatcttggaggggaaatggatactaactgttgat
tggattaaggcctgtatgctaaagaaaaaaattgtaagcgaggagccgtacgaaattacc
atggatgttcatggaatacgagaaggaccttatcttggaaggcaaagagctttaaagaag
aaaccaaaactttttaatggactacagttttacattatgggagatttcgaggttgcctac
aaagggtatctacaagatgtgatcgtagcagcaggaggaacaatcctgcgcaggcggcct
gtttctaatataaaagatgaagcttcaactatcatagtgttcggtgttgagcctagcaag
aagaaaactctgacccagagaagatctgatgctgaagccttggctaaatctgctagagcc
agagctgcaagcagttcatgggttttggattctattgcaggttgccaaattttagacttg
atataa
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