Cynoglossus semilaevis (tongue sole): 103384397
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Entry
103384397 CDS
T04866
Symbol
hdac6
Name
(RefSeq) histone deacetylase 6
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
csem
Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csem01009
]
103384397 (hdac6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csem03019
]
103384397 (hdac6)
04131 Membrane trafficking [BR:
csem04131
]
103384397 (hdac6)
03036 Chromosome and associated proteins [BR:
csem03036
]
103384397 (hdac6)
Enzymes [BR:
csem01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
103384397 (hdac6)
Protein phosphatases and associated proteins [BR:
csem01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
103384397 (hdac6)
Messenger RNA biogenesis [BR:
csem03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
103384397 (hdac6)
Membrane trafficking [BR:
csem04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
103384397 (hdac6)
Chromosome and associated proteins [BR:
csem03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
103384397 (hdac6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
103384397
NCBI-ProteinID:
XP_016891143
LinkDB
All DBs
Position
10:277067..292986
Genome browser
AA seq
994 aa
AA seq
DB search
MERKREEEELNNSLKSLDLSFRSTVSETGLIFSEVFTRHKNLWDSSHVEGPDRVMSIMHE
LEKQDLISHCVRVEPREASEDELLQVHTKEYVDLMKLTQTMSEAELRSLSDQYDSVYLHP
ETFQVSSLAVGSVLQLVDQVMSCKLRNGFAVIRPPGHHAQSNLANGYSIFNNIAIAARYA
QNTHGVKRVLIMDWDIHHGQGIQYQFEEDPSALYFSIHRYEQMSFWPHLPESDSMFVGSG
RGKGRNINLAWNKTQMNDSDYIAAFQQLLLPVAYEFQPQLVLVSAGFDAAVGDVKGEMCV
TPQCFHILTHMLMSIAEGRLVLALEGGYNLQSTAEGVAACVRSLLGGPCPPLAPPTAPSD
SALQSISQTISAQCPYWSCLQVLATTTGLVYDERMMEHLNMWDKHHPEQPQRIFKIFSKH
QKLGLVDRCKRIPVRLATEEELAMCHSEQHVQLMGSTSLMKSRALHRLSEDYNSIFLNNQ
SFTSAQLAVGGCFAAVDAILSKEVSNAVAIVRPPGHHAEPDSACGFCLFNTAALAARHAQ
KMTHPEKLRILILDWDVHHGNGTQHMFEDDDSVLYISLHRYDNGVFFPSSEDGAPNRVGV
GKGVGFNVNVAWSGGRMGDSDYLSAFHHVVMPIATEFNPGLVLVSAGFDAARGDPLGGYN
VTPEGYAHLTHMLKSLAGGRILLILEGGYNLTSISDSMTMCTSMLLGDPPPSLGTPLPHP
HHCAVATINEVIRHHSPYWKSLRIQIPASVRTSLPALKHRGKRSSKGKDRKSEASSADNT
IDTLDHLTQGLASLDIGQASPNHSSVTSTPVRGSKAEVCLSQEDVKKEPKKAESEQSQSE
KNPQSPVSTFSRQHQLLCLLCCNRHSGEMEGACGWSTSQEQGLYLIDPLPWCPHLDAVQP
LPPSGVDIHLPCQDCGSDIENWICLTCYQVFCGRYVKEHMVTHGCVTEHPLVLSFSDLSV
WCYPCESYIHHQILHEAKNAAHFAKFGVDVPPWT
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atggagaggaaacgggaggaggaggagctgaacaacagcctcaagtcactggacctttct
tttaggtcaactgtcagtgaaacaggcctgattttttctgaagtcttcactcgtcataaa
aacctttgggattccagtcatgtagaaggtccagacagagttatgtccattatgcacgag
ctggagaaacaggatctgatctctcactgtgtcagggtggagcccagagaggcttccgaa
gatgagctgctacaagttcacacaaaggagtatgtggacctaatgaagttgacccagaca
atgtcagaggctgaactcaggagtctgtctgaccaatacgacagtgtgtacctgcatcct
gagacgtttcaggtgagttcgttggccgtgggttcagttctacaactggtggaccaagtg
atgtcctgtaaactaagaaatggatttgctgtcatcagacctccaggacatcacgctcag
tccaatttggcgaatggatactctatcttcaacaacattgccattgctgctcgatatgct
cagaacacacacggagtcaagagagtgttgataatggattgggacattcaccatggtcaa
ggaatccagtaccaatttgaggaagacccaagtgctctttacttcagtatccacagatac
gagcagatgtccttctggcctcacctgccagagtctgatagtatgtttgtgggtagtgga
cgaggtaaaggacgaaacatcaacctagcctggaacaagactcagatgaatgattctgat
tacatcgctgcttttcaacaactgctcctgcctgtggcatacgagtttcagcctcagctc
gttctggtttctgctgggtttgatgctgctgttggagatgtaaagggggagatgtgtgtt
actcctcagtgtttccacattctcactcacatgttgatgagtattgctgaaggtcgactt
gttcttgctctggagggaggttataaccttcaatccacagcagagggcgtggcagcctgt
gtccgatctctccttggagggccctgtccacctctggctccacccactgctccgtctgat
agtgcactgcagtccattagtcagaccatctctgctcagtgtccatactggagctgtctg
caggtgctggctacaacgacaggcctggtttatgacgagcgtatgatggagcacctgaac
atgtgggacaaacatcatccggagcagccacagagaatcttcaagatattctccaaacat
cagaagcttggactggttgatcgctgcaagcgcatcccagttcgccttgcaacagaggag
gagcttgccatgtgtcatagtgagcaacatgtgcagctcatgggctcgacttcactgatg
aagagcagagccctacacagactcagtgaagactacaactccatctttttgaacaaccag
agttttacctctgctcagctcgctgttggaggctgtttcgccgccgtagatgccattttg
tctaaagaagtgagtaatgccgtggccattgtccgtcctccgggtcatcacgcagagccg
gactctgcctgcggattttgcctcttcaacacagcagccttagctgctcgccatgcccaa
aaaatgacccatcctgaaaaactgaggatccttattctggactgggacgtgcatcatgga
aacgggacgcagcacatgtttgaagatgatgacagtgtcttgtacatctcactccatcgg
tatgacaatggggtgtttttcccctcttcagaagatggtgcccccaacagagtaggtgtg
ggcaaaggggtgggatttaacgtgaatgtggcatggagtggaggaagaatgggcgactct
gattatctgtctgcctttcatcacgtggtgatgcccatcgctactgagtttaaccctggc
cttgttttggtgtcagccggctttgacgcagcacgtggtgacccactgggtggatataat
gtcacccctgaaggatatgcccacctgacacacatgctgaagtctctggcaggagggcgt
atcctgctcatcctggagggtggctacaacctgacctccatctctgactccatgactatg
tgcaccagcatgttgctcggagatcctccaccatccctgggaactccgctaccccatcct
catcattgtgccgtggcaacaattaacgaggtcattcgtcaccattcaccctattggaag
tcactcaggatccaaattccagcatcagtgcgaacatcactgcccgccctgaagcatcgt
gggaaacgtagctccaaaggaaaagacaggaagtcagaggcaagcagcgcggacaataca
atagacactctagatcatctgactcagggattggccagtttagacatcggtcaggcctca
cccaatcacagttcagttacatccactccagtgcgggggtcaaaggcagaggtctgcctt
agccaagaggacgtgaaaaaggagccaaagaaggctgagagtgagcagagccaatcagaa
aagaaccctcagagtccggtgagtactttttcacgacaacatcagcttttgtgcctcctc
tgctgcaacaggcattctggtgaaatggagggagcatgtggttggtcaacatctcaggaa
cagggcttgtacttgatagaccctctgccctggtgtccccacctggatgctgtccagccc
ctcccgccttcaggtgtggacatccatttgccatgtcaggactgcggctcagacattgag
aactggatttgtcttacctgttaccaggtcttttgtgggcgttatgtgaaggaacacatg
gtgactcatggctgtgttactgaacatcctctggtgctcagcttttctgacctttctgtg
tggtgttacccgtgcgagtcctacatccaccaccagattttacacgaggctaaaaatgcg
gctcactttgccaaatttggagtagatgtcccgccctggacctaa
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