Cynoglossus semilaevis (tongue sole): 103397767
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Entry
103397767 CDS
T04866
Name
(RefSeq) DNA polymerase beta
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
103397767
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csem03400
]
103397767
Enzymes [BR:
csem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
103397767
DNA repair and recombination proteins [BR:
csem03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
103397767
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
103397767
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
HHH_8
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_5
NTP_transf_2
HHH_2
Cdd1
DUF4806
Motif
Other DBs
NCBI-GeneID:
103397767
NCBI-ProteinID:
XP_008334363
UniProt:
A0A3P8WZR2
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All DBs
Position
Z:complement(9137420..9143011)
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AA seq
336 aa
AA seq
DB search
MSKRKAPQESPNEGITDFLVELANYEKNVNRAIHKYNAYRKAASTISKYPNKIRNGEEAK
KLDGVGAKIAEKIDEFLQTGKLRKLEKIRNDDTSTSINLLTRVTGIGPAAARKFFEEGVK
TLEDLKKIEHKLNHHQQIGLKYFEEFEKRIPRAEMEKMETLILGELQKIDPEYIGTICGS
YRRGAASSGDIDILLTHPDFTSQTEKQPKLLHAVVDHFESLGFVTDTLSKGDTKFMGVCQ
LQQSDEDEEEYLHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRTHALEKGFTLNEYTIR
PIGVTGVAGEPLFVDSERDIFEYIDYRYREPKERSE
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagaggaaagccccccaggaatcccccaatgagggaattacagactttcttgtt
gagctggccaactatgagaaaaatgtcaacagagccatacacaagtacaatgcatacagg
aaagctgcatccaccatttctaaatatcccaacaagatccggaatggtgaagaggccaaa
aagctggatggtgttggtgctaaaatagctgaaaagattgacgagttcctacagacaggc
aaactacggaaactggaaaagattcgaaatgatgacacaagcacttccatcaatctcctc
accagagtgacaggaatcggccctgctgcagccaggaaattttttgaagaaggggtcaag
actttagaagatctgaaaaagattgagcacaagctgaatcatcatcaacagattggactc
aagtactttgaagagtttgagaaaaggatccctcgtgctgaaatggaaaagatggagacc
ctgattcttggagagttgcagaaaattgaccctgaatacatcggaacaatctgtggtagt
tacaggagaggagctgcctcgagtggtgatattgatattttgctgactcacccagacttt
acgtctcagactgagaagcagcccaaactcctccatgctgtggtcgatcattttgaaagc
ctgggttttgtgacagacactctgtctaaaggtgacaccaagttcatgggtgtctgccaa
ctgcagcagagtgatgaagatgaggaggaatacctccacagacgtattgatatcaggtta
attcccaaggaccagtactactgtggagtcctgtatttcactggaagtgatatcttcaac
aagaatatgagaactcacgctctggagaagggattcactcttaatgaatacaccataaga
ccaatcggggtcaccggtgtggcaggagagcctctttttgtggacagtgagagagacatc
tttgaatatattgattacagatacagagagccaaaggaacgcagcgagtga
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