Coccinella septempunctata (seven-spotted ladybird): 123321912
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Entry
123321912 CDS
T07873
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
cset
Coccinella septempunctata (seven-spotted ladybird)
Brite
KEGG Orthology (KO) [BR:
cset00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cset01009
]
123321912
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cset03019
]
123321912
04131 Membrane trafficking [BR:
cset04131
]
123321912
03036 Chromosome and associated proteins [BR:
cset03036
]
123321912
Enzymes [BR:
cset01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
123321912
Protein phosphatases and associated proteins [BR:
cset01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
123321912
Messenger RNA biogenesis [BR:
cset03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
123321912
Membrane trafficking [BR:
cset04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
123321912
Chromosome and associated proteins [BR:
cset03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
123321912
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
123321912
NCBI-ProteinID:
XP_044765633
LinkDB
All DBs
Position
X:2945053..2949388
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AA seq
877 aa
AA seq
DB search
MRTKKRKMSRPTSRIQARNNHSKKITLKEMMALRKKQLEDGDLPIPDSVAVDPYEICYKY
LEDFRKTTLVGTETEVMCDHKNDWDENHPESAARLYEIINRIATLCLLTRCDVLPFETNC
PPSDVLLIHSNDLFETLKRVSKIRKTDEREQEATKYDGVYFSRDTFKAAMRALTWTINVT
KQVCQNKYHNGFALVRPPGHHARHEAFEGYCFFNNVAIAAEKCLKEKLCKKILIVDFDVH
HGDGTQEAFYERNDVLYFSMHRYENGLFWPNLREGNFDYIGKDGGKGYNVNVPINKIGAR
DTDYLAIIFNLLLPIAYEFHPDLVMISAGYDAAVGCPEGQMLLTPGFYSHIVQLLSGIAD
GHIVMVLEGGYFIPSLCESTAMSIKGLLNDPCPLLEETGYVQQSIVETINNCKGVLYNHW
NCFSVVQRFEYMPEYKINPHEEHIVAVKYFGEVEKPPYTTRDYYPEHSQLAIDDFTSFIS
RFRSNEANYKTYQGTGYAYESVVLLHAPDKKAHSYEDPARLMKILDLMEESQLTKRCIEI
KVPKDRDDYQYCLEVHKDYFLERFMSNSLKPLHDLYINKHTAKAAMTSVSVLLTVVDAVI
TEKVTNGVALIRPPGHHATADKAQGFCFLNNVAIAAKYAKQKYNVPRILIVDFDIHHGNG
TQDVFYNSSDVLYISIHRFDNGSFYPFNASAGAKFVGHGPGEGFNVNIPFNNEPMGNSEY
LAAFLNIILPIAYAFKPELVLVSAGFDAGINDPLGGYNVTPEMYGQFIYLLKPLASGKII
VALEGGYNVNTTGYGMLMCMKALRGESVPVPDDVFAKYLNKNAAETIREVVAIQQQYWPS
LNVMKHITNKVFHCRYNREFKEEIYSMDKFDVTDVEC
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgagaactaagaaacgaaaaatgtctcgacctacaagtagaattcaggcaaggaataac
cattccaaaaaaataaccctcaaagaaatgatggctctgagaaagaaacaattggaggat
ggagaccttcctatacccgacagtgtagcagtagatccatatgaaatttgttacaaatat
ttagaggactttagaaaaaccaccttagtgggaactgaaactgaagtgatgtgtgatcat
aaaaacgactgggatgagaatcaccctgaaagtgctgctcgcttatatgaaatcataaat
aggatagctacattgtgtttactgactagatgtgatgttcttccatttgagactaattgt
cctccgagtgatgtactattgatacattccaatgacttgtttgaaactttgaagcgtgta
tctaaaattagaaaaactgatgaacgtgagcaagaggcaaccaaatatgatggcgtctac
ttttcaagggatactttcaaggcagctatgagggcattgacatggacgattaatgtgaca
aaacaagtatgccaaaacaaatatcataatggatttgcccttgtaaggcctcctggacat
catgcaagacatgaggcctttgaaggatattgctttttcaataacgtagctatagcagca
gaaaaatgtttgaaggaaaaactctgtaaaaaaattttaatagtggatttcgatgtgcat
catggtgatggaactcaagaagcattttatgaaaggaacgatgtcctctatttctctatg
catcgttatgagaacggtttattttggccaaacctgagagaaggcaactttgattacata
ggaaaggatgggggcaaaggttacaatgtgaatgtacctataaataaaataggtgcaaga
gatacagactatttagccattattttcaaccttttattgcctatagcttatgagtttcat
ccagatttggttatgatttctgccggctacgatgcagctgttggttgcccagagggccaa
atgcttctaaccccaggtttctactcccatattgtacaacttctgtccggaattgctgat
ggacacatagtaatggttcttgaaggaggttatttcattccctccctttgtgaaagcaca
gctatgtctattaaagggctgctcaatgacccttgccctttgcttgaagaaactggttac
gttcagcaaagcatagtcgagactatcaataactgcaaaggagtgctttacaatcattgg
aattgtttctccgtggtgcagagattcgaatatatgccagaatataagataaatccacac
gaggaacatattgtggctgtgaagtattttggtgaggtcgaaaaacccccttacacaacc
agagactattatccagaacatagtcagctagccattgatgattttacttcctttatctcc
agattccgtagtaatgaagctaattataaaacttaccaaggaactggatatgcatatgaa
tcagtcgtgcttctccatgccccagataaaaaagctcattcctatgaagatcccgccaga
ttaatgaaaatattggatctgatggaagaaagtcaattaacgaaacgttgcatagaaatc
aaggtacctaaggacagagacgattatcagtattgtttagaagttcacaaagattatttt
ttggaaaggttcatgtctaattccctcaaaccattacatgatctctatatcaacaaacat
actgctaaagctgcaatgacctctgttagtgtgttactgacagtcgttgatgccgttatc
actgaaaaagtaacgaatggggttgcattgattcggccacctggtcatcacgcaactgct
gataaagctcaaggtttctgttttctcaataatgttgctatagcagcaaagtacgctaaa
caaaaatataatgtgccaagaatacttatagtcgacttcgatattcatcatgggaatggt
acccaggatgtattctataacagtagtgatgtattgtatataagtatccacagatttgat
aatggtagtttctacccatttaatgcatcagcaggtgccaaatttgttggccatgggcct
ggagaaggttttaatgtcaatattccattcaacaatgaaccaatgggtaacagcgaatac
ttggcagcttttttgaacattattcttcctatagcttatgcatttaaacctgaactggtg
ttagtttctgctgggtttgatgcaggaatcaacgaccctctaggtggttataacgtgact
cctgagatgtatggacagttcatatatcttctcaaacctcttgccagtggaaaaattata
gtagctttagaaggtggatataatgtgaataccacaggttatggaatgttgatgtgtatg
aaagcattgagaggggagtcagttccagtacctgatgatgtttttgctaaatacttgaat
aaaaatgctgcagaaactataagagaagttgttgctattcagcaacaatattggcccagc
ttgaatgttatgaaacatatcacgaataaagttttccactgtagatacaacagagaattc
aaagaagaaatttatagtatggataaatttgatgttactgatgttgaatgttaa
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