Drosophila miranda: 117187119
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Entry
117187119 CDS
T06132
Name
(RefSeq) LOW QUALITY PROTEIN: histone deacetylase 6-like
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
dmn
Drosophila miranda
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dmn01009
]
117187119
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmn03019
]
117187119
04131 Membrane trafficking [BR:
dmn04131
]
117187119
03036 Chromosome and associated proteins [BR:
dmn03036
]
117187119
Enzymes [BR:
dmn01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
117187119
Protein phosphatases and associated proteins [BR:
dmn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117187119
Messenger RNA biogenesis [BR:
dmn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
117187119
Membrane trafficking [BR:
dmn04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
117187119
Chromosome and associated proteins [BR:
dmn03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
117187119
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
SR-25
Motif
Other DBs
NCBI-GeneID:
117187119
NCBI-ProteinID:
XP_033245005
LinkDB
All DBs
Position
XL:11072285..11078681
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AA seq
1030 aa
AA seq
DB search
MMLFGSIRNAVSLAPSAFSSESTRPPTSRWNQCTGPDIQHQFQFQTLIQQERKKMSSPIV
TRRGAQQAKIQTRAMAMKSSSNSTATAASSSSSGAIKSSSVGAELPKRSETLLEAKRRAR
NMLKNQGNPPAMQETVTDIFQTAVKSRPLVREETALVYHQSMEQHCCRWDPKHLKCPDRF
NRVLDRCNELKLLDRCLPVSARLATKQEIFRLHTAQHFELLEQTSEVCDDQSMEELSSRF
DSIYIHPSTFQCSLLASGSTIDLVDSIITGKAQNGMAIIRPPGHHAMKAEFNGYCFFNNV
ALAAQHALDVHKLERILILDYDVHHGQGTQRFFYNDPVRDFDPXNRVLYFSIHRFEHGAF
WPHLQESDYHAIGEGPGLGFNFNVPLNETGMGDGDYMAIFQQLLLPVAMEYQPELIIVSA
GYDAALGCPEGEMQVTPAFYAHLLNPLLRLADSRVAVVLEGGYCLESLAEGAALTMRTLL
GDPCPVLVEPLLPPKRSMSKSILNCIFAHRPYWRCLQLQGTYDPSELKTKDRNRDLHIVE
RAWVGGPPPVTVYPTRDTSVQHLIPVAVVAGNTARLHRLRLETILTVPAVRVCYAYNPEM
MEHRNLDDLGHPEQPKRIQFIHKMHEDYQLLGRMKQLSARAATTDEICLAHSRSHVNTMR
RVLGRDKEDLQAQAATYNSVYLHPATFGCATLAAGSVLQAVDSVLRGESRSAICNVRPPG
HHAEPDQPHGFCIFNNVAIAAQYAIREFGLKRVLILDWDVHHGNGTQHIFESNPKVLYIS
VHRYENGTFFPKGPDGNYDVVGKHAGAGFNVNIPWNKKGMGDLEYALAFQQIVMPIAYEF
QPELVLVSAGFDAAIGDPLGGCKVSPEGYGLFTHWLSALAGGRIVVCLEGGYNVNSISYA
MTMCTKTLLGDPVPTPQLGVVALTRPPTTAFQSCLETLQCCVEVQRQYWKSLEFVGYRLP
HGYQIGENNNEDFLAASLLKLNISSDDAQGAAGGPTDGDQADPGQERPSDSKPKVKVKPP
NHSTAAPEEQ
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgatgttgtttggatcaatcaggaacgctgtgagtttggctcctagtgcgtttagcagt
gaatcaacgcgtccgcccacaagtcgctggaatcagtgcaccgggccagatatccagcat
caattccagttccaaactctcatacagcaagagagaaaaaaaatgagctcaccgatcgta
acgcgacgtggggcgcagcaggcaaagatacaaacccgcgccatggctatgaagtcgagt
tcgaattcgactgcgactgcggcatcgtcgtcatcgtcgggagcgatcaaaagcagcagc
gtcggcgccgagctgcccaaacggagcgaaaccctcttggaggcaaaacgtcgcgctcga
aacatgctcaagaaccaaggcaatccaccagccatgcaggaaactgtgacggatatattc
cagacagctgtcaagtcgcggcctctggtgcgcgaagaaacggctctggtctaccatcag
tcgatggagcagcattgctgccgctgggatccaaaacatttaaagtgtccggatcggttt
aatcgcgttttggatcgctgcaacgagctgaagctattggatcgctgcctgccagtgtcc
gccaggctggccaccaaacaggagatattccggctgcatacggcccagcattttgaactg
ttggagcagacgtccgaagtgtgcgacgaccagagcatggaggagcttagctctcgcttt
gattcaatatacatacatccgtccacatttcagtgctctttgcttgccagcggatccacc
attgatctggtggattctataattacgggcaaggcgcagaacggcatggccatcatccga
ccgccagggcatcatgccatgaaggccgaattcaatggctattgtttcttcaacaatgtg
gccttggccgctcagcatgcccttgacgtacataagctggagcgcatcctgatccttgac
tacgatgtccatcatggtcagggcacacagcgcttcttctacaacgatcccgtgagagat
tttgatccataaaatagggtgctgtatttctctatacatcgcttcgagcacggcgccttc
tggccacatctgcaggagtcggactaccatgccataggcgagggccctggcctgggcttc
aacttcaatgtgccgctcaatgagacaggaatgggcgacggggactacatggccatcttc
cagcagctgctactgcccgtggcaatggagtaccagccggaactgatcatcgtctcggcc
ggctatgatgcggccctgggctgtcccgagggtgaaatgcaggtgacgcccgccttctat
gcgcatctgctcaatccgctgctccgactggccgactcccgtgtggccgtcgtgctcgaa
ggaggctactgccttgaatctctggccgagggagcggccctcacgatgcgcaccctgctg
ggtgatccctgccccgtgctggtcgagccgctgctcccgccgaagcgttcgatgtccaaa
tccattctcaactgcatatttgctcaccggccgtactggcgttgcctacagctgcagggt
acctacgatccatcagagctgaagaccaaggatcggaatcgggacttgcatattgtagaa
cgtgcatgggttggcggaccgccacccgttaccgtttatccgacgcgggacacctccgtg
caacacctcattcccgttgcggtagtggccggtaacacggcccgattgcaccgactgcgg
ctggagaccattctgacggttcctgcagttcgtgtgtgctacgcttacaatcccgagatg
atggaacaccgcaacctggacgacctgggccatccggaacagccgaagcgcatccagttc
atacacaaaatgcacgaggattatcagctgctcggccgcatgaagcagctgtctgcgcgg
gcggccaccaccgacgagatctgtctggcgcacagtcgctcccacgtaaacacaatgcgg
cgggtgctgggccgagacaaggaggatctccaggcgcaggcagcgacctacaattcagta
tacttgcatccggccacgtttggttgcgccaccctggccgctggatccgttctccaggcg
gtagacagtgtgctccgcggggagtcccgcagtgcgatctgcaatgtccgtccgcctggc
caccatgcggagccggaccagccgcacggtttctgcatcttcaacaatgttgccattgcc
gcccagtacgccatccgggagtttggcctgaagcgtgtgctaatcctcgactgggatgtc
caccacggcaatggcacccagcacattttcgagtcaaatccgaaggtactgtacatcagc
gtccatcgctacgagaacggaacattcttcccgaagggccccgacggcaactacgatgtg
gtgggcaagcatgcgggagccggctttaatgtcaatataccatggaataagaagggcatg
ggggatctggagtacgctttggccttccagcagatcgtaatgccaattgcgtacgagttc
cagccggaactggtgctcgtgtcggcgggcttcgatgcggccatcggggatcctctaggg
ggctgcaaagtctcgcccgagggctacggtctgttcacccactggctgtctgccctggcc
ggtggccggatagttgtgtgcctcgaaggcggctacaatgtcaactccatttcgtatgcg
atgaccatgtgcacaaagacgctgttgggggatccggtgccgacgccacagctgggggtg
gttgccctgacaaggccgccgacaacggccttccagagctgcctggagacgctacagtgc
tgcgtggaggtgcagcgtcagtattggaagtcgctggagtttgttggctaccggctgccg
catggctaccagattggggagaacaacaacgaggattttcttgccgcttccttgctgaag
ttgaatatttcaagtgacgatgcccagggcgcggcgggcggccccaccgacggcgatcag
gccgatccagggcaggaacggcccagcgacagcaagcccaaagtcaaggtaaagccgccc
aatcattcaacggccgcgccagaggagcaataa
DBGET
integrated database retrieval system
