Desulfosarcina ovata subsp. sediminis: DSCO28_48980
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Entry
DSCO28_48980 CDS
T06286
Name
(GenBank) dehydrogenase
KO
K22516
formate dehydrogenase (coenzyme F420) alpha subunit [EC:
1.17.98.3
1.8.98.6
]
Organism
dov
Desulfosarcina ovata subsp. sediminis
Pathway
dov00680
Methane metabolism
dov01100
Metabolic pathways
dov01120
Microbial metabolism in diverse environments
dov01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
DSCO28_48980
Enzymes [BR:
dov01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.98 With other, known, physiological acceptors
1.8.98.6 formate:CoB-CoM heterodisulfide,ferredoxin reductase
DSCO28_48980
1.17 Acting on CH or CH2 groups
1.17.98 With other, known, physiological acceptors
1.17.98.3 formate dehydrogenase (coenzyme F420)
DSCO28_48980
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Motif
Pfam:
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
Motif
Other DBs
NCBI-ProteinID:
BBO84332
UniProt:
A0A5K7ZVQ6
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Position
5570385..5572439
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AA seq
684 aa
AA seq
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MEVIKTDCGLCINCCGINAYVEDGKLIKVEGIEDHWLNKGAICPKGERVPEYVYSANRVK
TPLKKVDGKFQSVSWDQALQEIGDKLLELKDKYGAKTLATYTGSVGVEHFEMAAFNQRFR
GAYGSPNFFNAEGNCFRSRILARQITFGRYPVEEPANADCIILWGRNPDESYFPMGRIIR
DAVKAGASLITIDVRRIPISKHGIFMQPRPGTDAAIGQAMIHVIIKEGLYDKEFVEKYCH
GFDKLAESVADCTPEWAAKVTGVGAAEIRMISRMFANANAGCIVEGVGGMNQGTNGLQNH
RLYSILQAITGNVERPGGWVTCPMIRLADMRLTDKIEGNALGYDEFPVFHQFGKNPPPYG
SSSLMCDTMITGNPYPIKAFICSGGNPAVTFADTKRFNAAMKNQDLIVVMDPMMTETANL
ADYVLPACTCFEETGIGGFPYGISYCEPWIMLRKAVIEPLYESKSIWWIWSELGRKMGYE
EYFPWNSDEEVAEHFFSTSGITMQQLKDNPEGLYFGKKEYGYHEKKGFFTASKKVELYSD
RMAELGADPIPVHVEPEQSKVSNPELAKEYPEVLNTGARTVEYIDAQMRDTTLRVVRPEP
EAEINTATADKYNIFDGELIGIETPRGSIKMRALVTPDILPGVVNVPHGWADANCNVLLD
AELLDPVSGYITMRGVACRLVKLS
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggaagtcattaaaaccgattgtggcctatgtatcaactgttgcggcatcaatgcatat
gttgaagacggcaagctgatcaaagtggagggaattgaggatcattggctcaacaaaggc
gccatttgtcccaagggcgaacgcgttcccgaatacgtctattccgccaaccgcgtcaag
accccgttgaagaaggtcgacggcaaattccagtcggtctcctgggaccaggcattgcag
gaaatcggcgacaagctactggagctcaaagacaaatacggcgccaaaaccctggccacc
tataccggctccgtcggtgtggaacactttgaaatggccgccttcaaccagcgcttccgc
ggtgcttacggcagccccaacttcttcaacgcagaaggaaactgcttccgctcccgtatc
ctcgcccgccagatcacctttggccgctatccggtggaagaaccggccaacgccgactgt
atcattctctggggccgcaacccggatgaaagctactttcccatgggtcgcatcatccgt
gatgccgtcaaagccggcgcatccctgatcaccatcgatgtgcgtcgcattcccatctcc
aaacatggcattttcatgcagccgcgtccgggcacggacgcggccatcggccaggccatg
atccatgtgatcatcaaagaagggctgtatgacaaggagtttgtcgaaaaatactgccat
ggttttgacaaactggccgaatccgtcgccgactgcacgcccgaatgggccgccaaggtc
accggtgtgggcgccgcggaaatccgtatgatttcccgcatgttcgccaatgccaatgcc
ggctgcatcgttgaaggcgtggggggcatgaaccaggggaccaatggtctgcagaaccat
cggctttactccatcctgcaagctatcaccggcaatgtcgaacgtcctggcggatgggtc
acctgtccgatgattcgcctggccgacatgcgcctgaccgataaaatcgaaggcaatgcc
ttgggatatgatgaatttcccgtatttcatcagttcggtaaaaatccgcccccttatggg
tcctcatccctgatgtgcgataccatgatcacgggcaacccttacccgatcaaggccttc
atctgctcgggcggcaacccggccgtgacctttgccgataccaagcgcttcaacgccgcc
atgaaaaaccaggacctgatcgtggtcatggatcccatgatgaccgaaaccgccaacctg
gccgactatgtcctgcccgcctgcacctgctttgaagagaccggcataggcggattccct
tacggtatctcctattgcgagccctggattatgctgcgcaaagccgtgatcgaaccgctg
tatgaaagcaaatcgatctggtggatctggagcgaactgggccgcaagatgggatacgag
gaatacttcccgtggaactcggacgaggaagtggccgaacactttttctccacctccggc
atcaccatgcagcagttgaaggataacccggaaggcctctacttcggtaaaaaagagtac
gggtaccacgagaagaaaggatttttcactgccagcaagaaggtcgagctttactcggat
cgtatggccgagttgggtgccgatcccattcccgtgcatgtcgagcccgaacagagcaag
gtcagcaatccggaactggccaaggaatacccggaagtccttaacaccggcgcccgaacc
gtcgaatacatcgatgcccagatgcgcgataccaccttgcgcgtggtccgccctgaaccc
gaggcggaaatcaacacggctaccgccgacaagtacaatatcttcgatggtgaattgatc
ggtatcgaaaccccgcgcggcagcatcaagatgcgcgctttggttaccccggacattctg
cccggcgtcgttaacgtcccccatggctgggccgatgccaactgtaatgtccttttggat
gccgaactgcttgacccggtctccggttacatcaccatgcgcggtgtggcctgccggttg
gttaaactgtcttaa
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