Dendroctonus ponderosae (mountain pine beetle): 109543806
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Entry
109543806 CDS
T04899
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Pathway
dpa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
109543806
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpa03019
]
109543806
04121 Ubiquitin system [BR:
dpa04121
]
109543806
03036 Chromosome and associated proteins [BR:
dpa03036
]
109543806
03400 DNA repair and recombination proteins [BR:
dpa03400
]
109543806
Messenger RNA biogenesis [BR:
dpa03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
109543806
Ubiquitin system [BR:
dpa04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
109543806
Chromosome and associated proteins [BR:
dpa03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
109543806
DNA repair and recombination proteins [BR:
dpa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
109543806
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
zf-RING_UBOX
zf-RING_5
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-RING_6
zf-C3HC4_3
BRCT_2
FYDLN_acid
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
109543806
NCBI-ProteinID:
XP_019769235
EnsemblRapid:
LOC109543806
LinkDB
All DBs
Position
Unknown
AA seq
488 aa
AA seq
DB search
MDLCSNILYKLAELQHVLECSICNKKCNSPVRIKTCGHYFCTKCLQAAKTPSTCPKCGEL
YAPTELDFNNLAKECDHELLELQELLQNAQQVAKNRDNSSKINLVQEEDTSLGISSEANT
ILYMGKQYRVQFLKSQCKKNAKGETPLHLACRRNKLNEIRSLINSPVDINAKDYAGWAPL
HEAIESKATEIVQYLLENNCLLDIPGPDYLTPLHKAVILNNADIVSILLKHGADVHGFDY
RGLKPEDYCENSKSFNEMFKSPEEIYPKVFNVFLPGKVSLYCHSIDEAIKAKLEGCKHIN
VVNKVDTKKVLTHFVIKKSHKLSLKIMQAMLEGLQFLNQEDVDDYIKGQYFINIPQHTFF
TNKELNDGVQKAMMSAILKLPKLFDGVNFHIEDHNKRVNVYNLELDKEHIIRLIKAGGGN
VLHRPPTASTCEVVHPFFSILGSSTFQCCNFIIYEEKHAPDLMYNMMELKHRSSKWTNNT
TNTIARHL
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggatctatgcagcaatatcctgtataagttagcagagttacaacacgtcttagaatgt
tcaatatgtaacaaaaaatgtaacagtcccgtacgaattaagacctgtgggcactatttc
tgcactaaatgcttacaagctgcgaaaacacccagtacctgtcccaaatgtggagaatta
tacgcacccactgagttagatttcaacaatttggctaaagaatgcgatcacgaactcctt
gagttacaagagctgttgcaaaatgcacaacaagtagccaaaaacagagacaactcttcg
aagatcaatttagtgcaagaggaggatacttccctgggcatttcttcagaagcaaataca
attttgtatatgggaaaacaatatcgtgtacagtttttaaaatcacaatgtaagaagaat
gctaaaggtgaaactcctttgcatttagcttgcagaagaaataagctgaatgaaattcga
tcactcattaattccccagtggatataaatgccaaagactatgcaggatgggccccactg
catgaagctattgagagtaaagcaacagaaattgtacaataccttctggaaaacaattgt
cttctcgatattccgggaccagattatctaacccctttgcataaagctgttattctgaac
aacgctgatatagttagcattctattaaagcatggagccgacgttcatgggtttgattat
cgtggtttaaaacctgaagactactgtgagaatagcaaaagtttcaacgaaatgtttaag
tcgcccgaagaaatctaccccaaggttttcaatgtgtttttgccggggaaagtctccttg
tattgccacagcattgatgaagctattaaagcgaagttagagggatgcaaacacattaat
gtagtaaacaaggtggatactaaaaaagtccttacacattttgtgattaaaaagtctcat
aagctgtccttgaaaatcatgcaagccatgctggaaggtttacaatttttgaatcaggaa
gacgttgatgactacattaaaggacaatattttataaatatcccacaacatacatttttc
accaataaggagttgaatgatggtgttcaaaaagctatgatgagtgccattctgaaattg
cccaaattgtttgatggcgtaaattttcacattgaggaccacaacaagcgtgtaaatgtg
tataatcttgagctagataaagaacatattatcagactgatcaaagctggtggaggaaat
gtattgcacaggccacctaccgctagtacttgtgaagtagtgcacccctttttctcaata
ttaggatctagtactttccagtgctgcaatttcattatatatgaagaaaaacatgctcca
gatttgatgtacaacatgatggaattaaaacataggagttctaaatggacaaacaacaca
acaaacaccattgcccgacatctataa
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