Daphnia pulex (common water flea): DAPPUDRAFT_194595
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Entry
DAPPUDRAFT_194595 CDS
T04347
Symbol
HDA6
Name
(GenBank) putative histone deacetylase HDAC6 protein
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
dpx
Daphnia pulex (common water flea)
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dpx01009
]
DAPPUDRAFT_194595 (HDA6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpx03019
]
DAPPUDRAFT_194595 (HDA6)
04131 Membrane trafficking [BR:
dpx04131
]
DAPPUDRAFT_194595 (HDA6)
03036 Chromosome and associated proteins [BR:
dpx03036
]
DAPPUDRAFT_194595 (HDA6)
Enzymes [BR:
dpx01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
DAPPUDRAFT_194595 (HDA6)
Protein phosphatases and associated proteins [BR:
dpx01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
DAPPUDRAFT_194595 (HDA6)
Messenger RNA biogenesis [BR:
dpx03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
DAPPUDRAFT_194595 (HDA6)
Membrane trafficking [BR:
dpx04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
DAPPUDRAFT_194595 (HDA6)
Chromosome and associated proteins [BR:
dpx03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
DAPPUDRAFT_194595 (HDA6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-ProteinID:
EFX83972
JGI:
Dappu1_194595
UniProt:
E9G8H1
LinkDB
All DBs
Position
Unknown
AA seq
1022 aa
AA seq
DB search
MSKQTKFSNFVKGRSPSNKKNEKLNVFVDHLQNTRDSKDKIRGKTGIVYDERMVEHQCLW
DPNYPECPERFTRVLERCREYGLAQRCVEIQPRKATQDELLKLHTPDRIELLKGTDGSPD
AEALEAISSGYDAIYIHPSTNELALLAAGSTVEMVDALLDGKIQNGMAVIRPPGHHAMKS
EYCGYCFFNNVAVAAQHALDNKGVEKILIVDWDVHHGQATQQMFYEDPRVLYFSVHRYEH
GAFWPNLRESDFHYIGSGAGKGFNVNVPLNKTKMGNADYLAIWHQLLLPLAYEFQPELII
VSAGYDAALGCFEGEMEITPACYSHLTSSLMGLAQGKLAVVLEGGYCLKSLAEGAALTLR
TLLGDPCPVIAKIEQPCQSIQESILSAIYVLRPMWKCLQFQGRFDASKVGSQKEGKHFVP
SVTFEGSDIKQTFFATRNCYPVQNNETIDLLDQRLDKLIKETSLAVPKHRVCFIYDERMA
LHRNINEPGHPERPARITSIYQKLMEFGVLERCHRLDARDADREELLWLHQADYIDEIAA
TAGKKQSTLNQLERQYGSIFICPETYQAALLSAGSSLQIVESILSGESRSGIGVVRPPGH
HAECDEAYGFCFFNNTALAAKYAIEIHHLERILIVDWDVHHGNGIQRMFEEDPRVLYISL
HRFDIFPFKPEESDCSVVGSGSGAGYTVNIAWPKRGMGDTEYLAAFQQIIMPIAYQYNPQ
LVLVAAGFDAAQGDPLGGCKITPEGYGQMTNMLSSLAQGRVAILLEGGYNLDSISHSMTM
CAKALLGDPLPSPRIEPLNPAAISTIKQVVSHLLPYWSSLCFHVDLPEGNVLPPCEVTKK
PLSIEEQLEKLQLESSGATSQETETIVEGTVLLLEACGVTESAPPKTLQEFLLLPENVEA
MKEGTLFSVVPLSWCPHIEGHVLPDDNVANPWSLQTPCSCCQDKSENWVCLSCYQVNCGR
FVKGHMKEHHNESGHSLVLSFSDLSIWCYECDSYVDNRAFYSAKNRLHVEKFGEPLPPSF
SG
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaacaaacaaagttttcgaatttcgtgaaaggtcgctcaccatcaaataaaaaa
aatgaaaaattaaatgtgtttgtggatcacttgcaaaatactcgggattctaaagataag
atacgtggcaaaacaggaattgtttatgatgaacggatggttgaacaccagtgtctttgg
gatcccaattaccctgaatgtccagagagattcacacgggttttggaaagatgccgtgag
tatggtttggctcaacgctgtgtagaaattcaacctagaaaggcaactcaagatgagctg
ttgaaacttcacacaccagacagaattgaattgctcaaaggaacagatggcagtccagat
gctgaagcattagaagctattagctctggttatgatgccatttacattcatccatcaaca
aatgagctagcattgttggcagctggatcaacagttgagatggttgatgctttactggat
ggaaagatacaaaatggaatggctgtaatcagaccaccagggcaccatgcaatgaaaagt
gaatactgtggctattgtttcttcaacaatgtagcagttgcagctcagcatgcattagat
aacaagggtgttgaaaaaattctgattgttgattgggatgttcaccatggccaggcaact
caacaaatgttctacgaagaccccagagtcttatatttctcggttcatcgttatgagcac
ggagctttttggcccaatcttcgtgaaagcgattttcactatattggaagtggagcaggc
aaaggctttaacgtgaacgtgccactgaataaaacgaaaatgggtaacgccgactatctg
gccatttggcaccagctgctattgcctctggcttatgaatttcaaccagagttgattatt
gtatcagccggctatgacgctgccttgggttgtttcgagggcgaaatggaaatcactccc
gcgtgctactcccacttgacgtcatcactcatggggctggcccaaggcaaactggctgtc
gttctcgaaggagggtactgcctgaaatctttggccgaaggagctgctctgaccttgcga
acattgcttggtgatccttgcccagtcatcgcgaaaatcgaacagccttgtcaaagtatt
caggaaagtattttgagcgctatttatgtgcttcgccctatgtggaaatgtctacagttc
cagggccgttttgatgcttcgaaagtgggtagtcaaaaggaaggaaagcactttgtaccc
agtgtcacttttgaaggatctgacatcaaacaaacattttttgccactcgaaactgttac
ccagtgcagaacaatgagacgattgacctcttggatcaacgccttgataaactcattaaa
gaaacgagcttggcagtccctaagcatcgggtgtgtttcatctacgatgagagaatggct
ttgcatcgtaacattaatgaacctggacatccggagagacctgctcgaatcacttcaatc
taccagaaattgatggaattcggagtgttggagcgctgccaccggctagatgctcgagat
gccgatcgcgaagaattgctgtggttgcatcaggccgactacatcgatgagattgcggca
accgccggtaaaaagcaatcgactctcaaccagttggaacggcagtacggatccatcttc
atctgtccggaaacctatcaggctgcgttgctctcagctggctcgtcgctccaaattgtt
gaaagtattttgagcggtgagagtcgtagtggaataggagtcgtccggccaccggggcac
cacgcagaatgcgatgaagcgtacggcttttgtttcttcaacaacacggcgctggcagcc
aaatatgccatcgagattcatcatttagaaagaatccttatcgtcgattgggatgtacac
cacggcaacggaatccagcggatgtttgaagaggatccacgcgtattgtacatttccttg
catcgctttgacatcttcccgttcaaaccggaagaatctgattgcagcgtagtaggaagc
ggatccggtgctggatacacagtcaacatcgcttggcctaaaagagggatgggcgacacg
gaataccttgctgcgttccagcagattattatgcctatcgcttatcaatacaatccgcag
ttagtcctcgttgcagctggattcgatgcggctcagggggatcctttgggaggctgcaag
attactccggaagggtacggacaaatgacgaacatgcttagttcacttgctcaaggacgt
gttgctatcctactcgaaggcggctacaatttggattccatttcgcactcgatgaccatg
tgtgccaaagctttgctaggagacccattgccttcgccaagaatcgaaccactcaatccg
gcagccatcagcaccatcaagcaggtcgtcagccatttgctaccttattggagtagcctc
tgcttccacgttgatctacccgaaggaaatgttctcccgccttgtgaagttacgaaaaag
ccgctcagtattgaagaacaattggagaaactccaactcgagtcatcaggagcaaccagt
caggagacagaaactatcgtagagggtactgtgctattgctggaagcttgcggtgtgact
gagtctgctcctccaaaaacacttcaggaattcttgctgttgccagaaaatgttgaggct
atgaaggagggtacgctgttttctgtggttcctttatcgtggtgtccacatatagaagga
cacgttctacccgatgataatgtcgccaatccttggagccttcaaactccttgctcatgt
tgccaggataagtcagaaaactgggtctgcctatcttgttatcaggtcaactgtggacgg
ttcgtaaaaggtcacatgaaggaacatcataacgagagtggtcattcgctggttctcagt
ttctctgatctgtcaatctggtgttacgaatgtgattcctacgtcgataatagggcattc
tattcagccaagaaccgactacatgtggagaagtttggcgaacccttgccaccttcgttt
tcaggttga
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integrated database retrieval system
