Daphnia pulicaria: 124344153
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Entry
124344153 CDS
T08670
Name
(RefSeq) BRCA1-associated RING domain protein 1-like
KO
K10683
BRCA1-associated RING domain protein 1
Organism
dpz
Daphnia pulicaria
Pathway
dpz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
124344153
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpz03019
]
124344153
04121 Ubiquitin system [BR:
dpz04121
]
124344153
03036 Chromosome and associated proteins [BR:
dpz03036
]
124344153
03400 DNA repair and recombination proteins [BR:
dpz03400
]
124344153
Messenger RNA biogenesis [BR:
dpz03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
124344153
Ubiquitin system [BR:
dpz04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
124344153
Chromosome and associated proteins [BR:
dpz03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
124344153
DNA repair and recombination proteins [BR:
dpz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
124344153
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_5
Ank_4
Ank_3
BRCT
zf-RING_6
BRCT_2
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
124344153
NCBI-ProteinID:
XP_046653574
EnsemblRapid:
LOC124344153
LinkDB
All DBs
Position
6:complement(12255219..12257291)
Genome browser
AA seq
535 aa
AA seq
DB search
MNNNNMSKINDKFPESRKSFLELGKLLKCEACQMLACNPHVLGGCDHIFCLSCANLHSGK
PCPKCGIFSEPGICRPDLKIENLLKAYLPMAKFLGIDVTDTCENDVVNNNESSVKPVAIT
PSAASRSSKSSKNVMKTENFASPVQIVKKRERAVSLNESLNSTISGTPASKINKRNQKGE
TLLHVACLKLDIQKVKELLGLGVNTNTQDNAGWTPLHEVVSSGNEALVTLLLENGANPNI
PGGHNETPLHDAVASKQTAIVRLLVSYGADVNARNSRGLTPKDMYSKADEDMKAALESST
IVHSTHSYAERTTSQIIQLFVLNPEKKSQPRLNKLARTLSFKLVSTYSSQVTHVALRLDD
PSNVIKANPHFYSAVLQGHFIVDFKWIEESEKLERLTDPYLHEIDGTLSRAPSDGAPGRL
NIANQLPGLFNNCFFYLNGIFSTPSKADITQWIRHGGGTVLTRSPNPECILPGEKIPYHA
APKGLLAQCSHFILYDLNAKTQPSLKYNMSHVKTLSVDWLVACIENFLLVDPFDF
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgaacaataacaacatgtccaaaataaacgacaagtttcctgaaagtcggaaatctttt
ttagagcttggaaaactgctcaaatgtgaagcatgccaaatgctggcatgcaatccacat
gttctgggaggatgtgatcacatattctgtctgtcttgtgccaatcttcattctggtaaa
ccatgtccaaaatgtggaattttttcagaacctggcatctgtagaccagatctcaaaatt
gagaatcttctcaaagcttacctaccaatggccaagtttcttggaattgatgtaacagat
acgtgtgaaaatgatgttgtcaacaacaatgaatcaagtgtaaaacctgtcgcaataaca
ccatcagctgcaagccgatcctctaaatcatctaaaaatgtaatgaaaactgaaaatttt
gccagtccagttcaaattgtaaagaagcgtgaaagggctgtaagcctcaatgagagcctc
aatagtaccatcagtggaacacctgcatcgaagataaacaagcgtaatcaaaaaggggaa
actttgctgcatgtggcctgtctcaagctggacattcaaaaagtcaaggaacttttaggg
cttggggttaatacaaacacacaggataatgctgggtggactccattgcatgaagtagtg
agttctgggaatgaagcgcttgtgactctgcttttggaaaatggtgcaaaccccaatatt
cctggtgggcataatgaaactcctcttcacgatgccgttgctagcaaacaaacagctatt
gtccgacttcttgtgtcgtatggcgccgatgtgaatgctcggaatagtcgaggtctcact
ccaaaggacatgtattcaaaagcggacgaagacatgaaagctgctctcgagtcttccacg
attgttcattcaacacacagctatgccgaaaggacaacttcacagataatacagcttttt
gtactcaacccggaaaaaaagtctcagccaagactcaataaacttgctcgcacactcagt
ttcaagttggtttcaacttactcgagtcaagtgactcatgtcgctctgcgcttggatgat
cctagcaacgtcatcaaggctaacccgcatttctattctgcagttctccagggacacttc
atcgtcgattttaaatggatagaggaaagcgagaagctggaacgcttaacagatccatat
ctacacgaaattgacgggactttgagtcgtgcaccatcagacggagccccaggccggttg
aatatcgccaatcagctcccaggcttattcaacaattgtttcttctatctcaacggcatt
ttctctacgcctagtaaagccgacattactcaatggataaggcacggtggaggtacagtg
ttaacacgcagtccaaatccagaatgtatccttccgggtgagaagataccttatcacgct
gcaccaaaaggtcttttggctcaatgctctcatttcattctgtatgatttaaacgccaaa
acgcagccttctctcaagtacaacatgtcacacgttaagacactatctgtggattggctt
gtcgcctgtatagagaattttctcctggttgatcctttcgatttctga
DBGET
integrated database retrieval system
