Dinoroseobacter shibae: Dshi_3149
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Entry
Dshi_3149 CDS
T00612
Symbol
ddpX
Name
(GenBank) putative D-alanyl-d-alanine dipeptidase
KO
K08641
zinc D-Ala-D-Ala dipeptidase [EC:
3.4.13.22
]
Organism
dsh
Dinoroseobacter shibae
Pathway
dsh01502
Vancomycin resistance
dsh02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Dshi_3149 (ddpX)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Dshi_3149 (ddpX)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dsh01002
]
Dshi_3149 (ddpX)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dsh01011
]
Dshi_3149 (ddpX)
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
dsh01504
]
Dshi_3149 (ddpX)
Enzymes [BR:
dsh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.13 Dipeptidases
3.4.13.22 D-Ala-D-Ala dipeptidase
Dshi_3149 (ddpX)
Peptidases and inhibitors [BR:
dsh01002
]
Metallo peptidases
Family M15: zinc D-Ala-D-Ala carboxypeptidase family
Dshi_3149 (ddpX)
Peptidoglycan biosynthesis and degradation proteins [BR:
dsh01011
]
Peptidoglycan biosynthesis and degradation
Carboxypeptidase
Dshi_3149 (ddpX)
Antimicrobial resistance genes [BR:
dsh01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
Dshi_3149 (ddpX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M15
Motif
Other DBs
NCBI-ProteinID:
ABV94882
RoseoBase:
Dshi_3149
UniProt:
A8LLX3
LinkDB
All DBs
Position
complement(3315173..3315985)
Genome browser
AA seq
270 aa
AA seq
DB search
MSPARPLRLSDGPLAALRARPLAAEVAIATARKGDYRAHPIDQAHALHADPMVDLAEYGV
AGANHYHATHNPPYHADITGSIPALRARRSVAQRLARVNDRLAAYGLEIWVFDAWRPIAV
QNHFHDHWMPDYLRRARPELDAAALQAEVTRYWAKGAPGGRIDPASPPPHATGGAVDLTL
RDSASGAHLFMGSIFDDVTALSNTDAFEATDDAMSFSALEARDNRRLLFWLMAGEGLANN
PTEWWHFSHGDQMWARITGARAALFGPAPP
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgagccccgcccgccccctgcgcctttccgacggtccgcttgccgcgctgcgcgcgcgg
cccctcgccgccgaggtcgccatcgccaccgcgcgcaagggcgattaccgcgcccatccg
atcgaccaggcccatgcactccatgccgacccgatggtcgatctggcggagtacggggtc
gccggggccaaccactaccacgcgacccataacccgccctaccatgccgacatcaccggc
agcatcccggccctgcgcgcccggcgctccgtcgcccagcgtctcgcgcgggtgaacgac
cgccttgcggcctacgggctggagatttgggtgttcgatgcctggcgccccatcgccgtg
caaaaccatttccacgaccactggatgcccgattacctgcgccgggcgcggcccgagttg
gacgctgcggcgctgcaggccgaagtcacccgctactgggcgaagggcgcgcctggcggg
cggatcgacccggcctcgcccccgccccatgcgaccggtggcgcggtggacctgaccctg
cgggacagcgccagcggcgcgcatctcttcatgggctcgatcttcgacgacgtcaccgcc
ctgtccaacaccgacgcgttcgaggcgaccgacgacgcgatgtccttctcggcgttggag
gcccgcgataaccgccgcctgctcttctggctgatggcgggggaggggctggccaacaac
cccaccgaatggtggcacttttcccatggcgaccagatgtgggcgcggatcaccggggcg
cgcgcggccctgttcggccccgcacccccatga
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