Dipodomys spectabilis (banner-tailed kangaroo rat): 122107572
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Entry
122107572 CDS
T07891
Symbol
Bard1
Name
(RefSeq) BRCA1-associated RING domain protein 1 isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
122107572 (Bard1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsp03019
]
122107572 (Bard1)
04121 Ubiquitin system [BR:
dsp04121
]
122107572 (Bard1)
03036 Chromosome and associated proteins [BR:
dsp03036
]
122107572 (Bard1)
03400 DNA repair and recombination proteins [BR:
dsp03400
]
122107572 (Bard1)
Messenger RNA biogenesis [BR:
dsp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
122107572 (Bard1)
Ubiquitin system [BR:
dsp04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
122107572 (Bard1)
Chromosome and associated proteins [BR:
dsp03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
122107572 (Bard1)
DNA repair and recombination proteins [BR:
dsp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
122107572 (Bard1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_6
Ank
Ank_2
Ank_4
Ank_3
Ank_5
BRCT
BRCT_2
zf-RING_5
zf-C3HC4
NIBRIN_BRCT_II
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
122107572
NCBI-ProteinID:
XP_042535297
LinkDB
All DBs
Position
Unknown
AA seq
772 aa
AA seq
DB search
MPGSRQPRVRSGNEPDPAPAMESEVGGGAWAHSRAALARLEKLLLCSRCTNILTDPVCLG
GCEHIFCSDCVSDCIGTGCPVCYTPAWVLDVKINRQLDSMIHLCSKLRNLLHDNELSDVK
EATSRTRIFNDAENKKDSIKMWFSPRSKRVRYVVNKVSVQTKPKKTTDDKALPTSMYEFI
STTPPTVVSKRARKASTTPAKKQTNRTLAEINQEWNIESEQEGSDFMSKDESKERIVSFC
SQPSVLSTPEESDGIDLIESCSVSESECGNVTEVSLPLAEHTVSPDTESKNEVTSEKVYK
NDHTSNTSLTLGCNGKHRSSNRLSQPVPKRSRSRVPSTRRGSVKPTVYSANLRLLDCSSS
SKLPVDDTLRRRNSNMSDDSISLSPPTLPSSLNSSTYRRMMSSPSTMKLSPSSLVVGKRN
HRGETLLHIASIKGDVPSVEYLLQNGNDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKA
LVNSTGYHNDSPLHDAARNGHLDIVKLLLSHGASRNVVNIFGLRPVDCTDNENMKSLLLL
PEKNESSSTCYQSVMSSWSRRDGPLVLIGSGLSSEQQSLLSELSGILKAKKCAEFDSTVT
HVIVPGDQAQSTLKCMLGILNGCWILKFDWVKACLQTKVYEEEEMYEIPEGPQRSRINKE
LLLPKLFDGCYFYFWGTFKHHPKDNLTKLVTAGGGQILSRKPKPDSDVTQTINTVSYHAK
PDSDQRFCTQYIVYEDLSDYCPERVRQGKVWMAPSSWLISCVISFELLPLDS
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgccggggagccggcagcccagggtccgttcggggaacgaacctgatcccgcgcccgcc
atggagtcggaggttggcggcggggcctgggcccacagccgcgccgcgctcgcccgcctg
gagaagctgctgctctgctcgcgatgcactaatattctgacagaccctgtgtgcctagga
ggctgtgaacacatcttctgtagtgattgtgtaagtgactgcattggaacaggatgtcct
gtgtgttacactccagcctgggtactagatgtcaagataaacagacagttggacagcatg
atccacctttgtagtaagcttcgaaatctcctccatgacaatgagctttcagatgtgaaa
gaagctacatctaggacaaggatatttaatgatgcggaaaacaagaaagactcaataaaa
atgtggtttagtcctcgaagtaagagggttagatatgttgtgaataaagtttcagtgcaa
accaagcctaaaaagacaacagatgataaagctctgccaacttcaatgtatgaattcata
tctacaactcctcccacagttgtttctaagagagctagaaaggcatctacaacacctgca
aaaaaacaaacaaatagaactttagctgaaatcaaccaagaatggaacatagagtcagaa
caagaaggcagtgacttcatgtctaaagatgaatctaaggaaaggatagtgtccttctgt
agccagccatctgttttatctactccagaggaaagtgatggaatagacttaattgaaagt
tgttccgtatcagaatctgaatgtggaaatgtgactgaagtctctttgccattggctgaa
catacagtgtctccagacactgaaagtaagaatgaagtgacttctgaaaaggtctataag
aacgatcatacttctaatacatctttgacattaggttgtaatgggaaacatagatctagt
aacagactttctcagcctgttcctaaaaggagtagaagccgggttcccagcactcgtaga
ggttctgttaaacctacagtgtactcggcaaacttacgattgcttgattgttcatcttca
agcaaacttccagtggatgacacactcaggaggagaaacagtaacatgtcagatgactcc
attagcctctcaccaccaacactgccttcttcactgaatagttcaacatatagacgaatg
atgtccagcccctcgacaatgaagctctcgcccagtagccttgtggttgggaaaagaaat
catagaggagagactttgcttcatattgcttctataaagggagatgtaccttctgttgaa
taccttttacaaaatggaaatgacccaaatgtgaaagaccatgctggatggactccactg
catgaagcctgcaatcatggacatctgaaggttgtggaattgctgctgcagcataaggcc
ttggtgaacagcactggctaccacaacgactctccacttcatgatgcagcccggaatggg
catcttgatatagtcaagctcttactgtcccacggagcctctaggaatgttgttaacata
tttggtctgcggcctgtggattgtacggacaatgaaaatatgaaatcattattgctgcta
ccagagaagaatgaatcatcttcaacttgttatcaatcagtaatgagcagctggtcacgc
agggatggacctcttgtgcttattggcagtgggctttcttcagaacaacagagcttgctc
agtgagctttcaggaattctcaaggctaaaaaatgtgccgaatttgacagtacagtaacg
catgtcattgttcctggtgatcaggctcaaagtactctgaaatgcatgcttgggattctc
aatggatgctggattctcaagtttgactgggtgaaagcttgtttacaaacaaaagtatat
gaagaggaagaaatgtatgaaattcctgaaggtccacagagaagcagaatcaacaaagaa
ctgctgttgccaaagttgtttgatggatgctacttctatttttggggaaccttcaaacat
catccaaaagacaaccttactaagcttgtcactgccggagggggccaaatcctcagtaga
aaacccaaaccagacagtgatgtgactcagactatcaatacagtctcataccacgccaaa
cccgattctgatcagcgcttctgcacacagtacatcgtctatgaagatttgtctgattac
tgcccagaaagggttcggcagggcaaagtctggatggctccttcaagttggcttataagc
tgtgtgatttcctttgagttgcttcctcttgacagctag
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