Drosophila virilis: 6633570
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Entry
6633570 CDS
T01066
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
dvi
Drosophila virilis
Brite
KEGG Orthology (KO) [BR:
dvi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dvi01009
]
6633570
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dvi03019
]
6633570
04131 Membrane trafficking [BR:
dvi04131
]
6633570
03036 Chromosome and associated proteins [BR:
dvi03036
]
6633570
Enzymes [BR:
dvi01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
6633570
Protein phosphatases and associated proteins [BR:
dvi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
6633570
Messenger RNA biogenesis [BR:
dvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
6633570
Membrane trafficking [BR:
dvi04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
6633570
Chromosome and associated proteins [BR:
dvi03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
6633570
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
Motif
Other DBs
NCBI-GeneID:
6633570
NCBI-ProteinID:
XP_002057375
UniProt:
B4M7U4
LinkDB
All DBs
Position
Unknown
AA seq
1153 aa
AA seq
DB search
MSSPIVTRRGAQQAKIQTRAMVKSKSTSTSSSSATAAAAAAAAAANAATGPNANSSNGAG
SCGPRKPSPALQEAKRRARNMLKSQNNGTAAQLEPVIDIFQNALNAKSMHRGPTALIYDE
TMSEHCCLWDSTHQERPERFTRTLERCRELKLVERCLQLNSRLATKDEILKLHSMEHYER
LEQTSAVHDAEAMEELSSHYDAIYIHPSTFRLSLLASGSTIELVEQLLLGKAQNGMAIIR
PPGHHAMKSEFNGYCYFNNVALAAQHALDAHQLQRILIIDYDVHHGQGTQRFFYNDSRVL
YFSIHRYEHGSFWPNLQESDYHAIGAGSGTGYNFNVPLNAKGLGNGDYMAIFQQLLLPVA
MEYQPELIIVSAGYDAALGCPEGEMEVTPACYPHLLNPLLHLANCRVAVVLEGGYCVESL
SEGAALTLRALLGDPCPALVEPLQLPSPVLREALLNCIYVHRPYWRCLQLQQTYTPGELQ
SASTIPLHRVQRIWLGGPPPAPDQRYPTRGTSAQLSAAVVASNASRLSLLRAETQLSVPP
VRVCYAYDAQMLQHFNLHDATHPEQPMRIRQIHQMHEDYQLLDRMQQLAARAATTDEVCL
AHTRAHVNSVRRLLGRSVEELQQVGAGYNSVYLHPRTFECAILASGAVLQAVDSVLRGQS
RSGICNVRPPGHHAEPDQPHGFCIFNNVAIAAQYAIREYALERILIVDWDVHHGNGTQHI
FESNPKVLYISVHRYEHGAFFPKGPAGNYDVVGKNAGRGFNVNIPWNKKGMGDLEYALAF
QQLILPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVTPEGYGLFTHWLSALAGGRIIVCLE
GGYNVNSISYAMTMCTKTLLGDPVPTPQFATTAHQRSPTVAFQSCVETLQLCVEQQRHHW
KSLVFGCKLPQFVLGENNNEDFLAATMDRLSISNDDPLGAAGGDIDAQPDPGQDRPSGSK
PKVKVKTLSEFMAEHKEALEQQEMFAIYPLKSCPHLSLLRPEEVPKSIKTNGACGDCAST
VENWVCLSCQSIGCGRYINEHMEQHCRRAKHPLVLSFSDLSVWCYECSAYIDHPLLYAYQ
NLAHLDKFQEPMAWTHGCMQRSDGCYPIEAEHQDNDRNSDRDKDKDKDKDSGSSNTNSSS
IGSGYYIQLERNN
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atgagctcaccgatcgtaacgcgacgaggcgcacaacaggccaaaatacaaactcgcgcc
atggtcaagtcgaagtcgacgtcgacgtcgtcgtcatcggcgacggcggcggcggcggca
gcagcagcagcagcgaacgcagcgacggggccgaacgccaacagcagcaacggcgccggc
agctgcggtccacgcaaaccgagtccagcgcttcaggaggcaaaacgtcgggcgcggaac
atgctcaaatcgcagaacaacggcacagccgcccagctggagccagttatcgatatcttt
cagaatgccctcaacgcgaagagcatgcatcgtggccccaccgcgctcatctatgatgag
accatgagcgagcattgctgcctctgggacagcacacatcaggagcgacccgaacgcttt
acgcgcaccctggagcgatgtcgcgagctgaagctagtggagcgttgcctgcagctaaac
tcccgtctggcgacaaaggacgaaatcctgaagctacactcaatggagcattacgagcga
ctggagcagacgtcggccgtgcacgatgcggaggctatggaggagctaagctcccattat
gacgccatctacatacatccgtccacgttcaggctgtcgctcttggccagcggctcgacc
atagagctggtggagcagctgctgctgggtaaggcgcagaatggcatggccataatacga
ccgccgggccatcatgcgatgaagtcggaattcaatggttattgctattttaataatgtg
gcgcttgctgcacagcatgctctcgatgcgcaccagctgcagcgcatcctgattatcgac
tacgatgtgcatcatggccagggtacgcagcgcttcttctataacgattccagggtcttg
tatttctcgatacatcgctatgagcacggcagcttctggccgaatctgcaggaatcggat
taccatgcgattggcgctggctccggcaccggctacaatttcaatgtgccgctgaatgcc
aagggcttgggcaatggcgattatatggccatattccagcagctgctgctgccggttgcc
atggaatatcagccggagctgattattgtctcggccggctatgatgcggccctgggctgc
ccggagggtgagatggaggtgacgcccgcctgctatccgcatctgctcaatccgctgctg
catttggccaattgccgtgttgccgttgtgctcgagggcggctactgtgtggaatcgttg
tccgagggcgccgccttgacgctgcgcgccctgctgggtgatccgtgcccggcgctggtg
gagccgctgcagttgcccagcccggtgctgcgcgaggccctgctcaactgcatctatgtg
catcgtccgtactggcgctgcctgcagctgcagcagacctatacgcccggcgaactgcag
tcggccagcacgattccgttgcatcgcgtgcagcgcatttggctgggcggcccgccgcca
gcgccagatcagcgctatccgacgcgcggcacctccgcccagctgagtgccgctgttgtc
gccagcaatgcgtcccgtttgagtttgttgcgcgccgagacgcagctgtcggtgccgccg
gtgcgtgtttgttatgcctacgatgcccaaatgttgcagcatttcaatttgcacgatgcc
acccatccggagcagccgatgcgcatacgtcagatccatcagatgcacgaggactatcag
ctgctggatcggatgcagcagctggcggcgcgcgccgccaccacggacgaggtgtgcctg
gcccatacgcgcgcccatgtcaattcggtgcgtcgcctgctgggtcgcagcgttgaggaa
ctgcagcaagtgggcgccggctacaattcggtgtacctgcatccgcgcaccttcgagtgc
gccatactagcctccggcgccgtactccaggcggtcgatagcgtactgcgcggccaatcc
cgcagcggcatctgcaatgttcgaccgccgggccatcacgccgaaccggatcagccgcac
ggcttttgcatattcaataatgtggccattgcggcccagtatgcgatacgggaatatgca
ctcgagcgcatcctcattgtcgactgggatgttcaccatggcaacggcacacagcacatc
tttgagtccaatcccaaggtgctctacataagtgttcatcgctacgagcatggcgccttc
tttcccaagggtcccgccggcaactacgatgtcgtgggcaagaatgccggccgtggcttc
aatgtcaatattccctggaataagaagggcatgggcgatctggagtacgcattggccttt
cagcagctaatcctgcccatcgcctacgagttcaatccgcagctggtgctcgtctcggcc
ggcttcgatgcggccattggggatccgttgggcggctgcaaggtgacaccggagggctac
ggcctgttcacccattggctgtcggccttggccggcggtcggatcatcgtctgcctggag
ggcggctacaatgtcaactccatatcgtatgcgatgaccatgtgcactaaaacgctgctg
ggcgatccggtgccgacgccccaattcgcaacgaccgcacaccaacgctcaccgacggtg
gccttccagagctgcgtggagacgctgcagctgtgcgtggaacagcagcgtcatcattgg
aagtcgctcgtctttggctgcaagctgccccaattcgttttgggcgaaaacaataacgag
gattttcttgctgctaccatggaccgattgagtatatcaaatgacgatccactcggcgcc
gccggcggcgatatcgacgcacagcccgatcccggccaggaccggcccagcggcagcaag
cccaaagtcaaggtaaaaacgctcagcgagtttatggccgagcacaaggaggcgctcgag
cagcaggaaatgtttgccatttatcccctcaaaagctgcccacacttgagcctgttgcgt
ccggaggaggtgcccaaatcaataaaaacaaacggcgcatgcggcgactgcgcctcaacg
gtggagaattgggtatgcctgagctgccagagcatcggctgcggtcgctatatcaatgag
cacatggaacagcattgccgacgagccaagcatccgctggtcttgagcttcagcgatcta
tccgtgtggtgctacgagtgcagcgcctatatcgatcatccgctgctctatgcctatcag
aatctggcgcatctggacaagttccaggagccgatggcctggacacatggctgcatgcag
cgctccgatggctgctatccgatcgaggcggagcatcaggacaacgacaggaacagcgac
agggacaaggacaaggacaaggacaaggatagcggctccagcaataccaacagcagcagc
attggcagcggctactacatacaactcgagcggaataactga
DBGET
integrated database retrieval system
