Equus caballus (horse): 100062208
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Entry
100062208 CDS
T01058
Symbol
HDAC6
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
ecb
Equus caballus (horse)
Pathway
ecb04613
Neutrophil extracellular trap formation
ecb05014
Amyotrophic lateral sclerosis
ecb05034
Alcoholism
ecb05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
100062208 (HDAC6)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
100062208 (HDAC6)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100062208 (HDAC6)
09165 Substance dependence
05034 Alcoholism
100062208 (HDAC6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ecb01009
]
100062208 (HDAC6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecb03019
]
100062208 (HDAC6)
04131 Membrane trafficking [BR:
ecb04131
]
100062208 (HDAC6)
03036 Chromosome and associated proteins [BR:
ecb03036
]
100062208 (HDAC6)
Enzymes [BR:
ecb01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
100062208 (HDAC6)
Protein phosphatases and associated proteins [BR:
ecb01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100062208 (HDAC6)
Messenger RNA biogenesis [BR:
ecb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
100062208 (HDAC6)
Membrane trafficking [BR:
ecb04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
100062208 (HDAC6)
Chromosome and associated proteins [BR:
ecb03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
100062208 (HDAC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
100062208
NCBI-ProteinID:
XP_005614176
Ensembl:
ENSECAG00000000227
VGNC:
50595
LinkDB
All DBs
Position
X:40750141..40769627
Genome browser
AA seq
1229 aa
AA seq
DB search
MEKKTSGTRGATGRREFGGGSQGRSLRKGLRSNVVRGEASPTMTSTGQDSTTTRQRRSRH
NPHSPPHDSSVASKRSVKKGATLRSSPNLAEVKKKGRMKKLSQAADQDLIMGLQGLDLNL
EAKTLSGTGLVFDEQLNEFHCLWDDSFPEGPERLHAIKEQLIQEGLLDRCVSFQARFAEK
EELMLVHSLEYIDLMETTQYMNERELRILADTYDSVYLHPNSYTCACLASGSVLRLVDAV
LGAEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHEIQRILIVDWDVHHGQ
GTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASDWSTIGFGQGRGYTINVPWNQVGMRDAD
YIAAFLHILLPVALEFQPQLVLVAAGFDALQGDPKGEMAATPAGFAHLTHLLMGLAGGKL
ILSLEGGYNLRSLAEGVSASLHTLLGDPCPMLESPGAPCLSAKASLSCTLEALEPFWEVL
VRSVETMEEDIVEGDNVEEKEEGPWQPPALPILTWPVLQARTGLVYDQRMMGHYNLWDSH
HPEMPQRVSRIMRRLEELHLAERCLTLPARPATDAELLTCHSAEYVGRLRATEKMKTREL
HREGANFDSIYICPSTFACAQLATGAVCRLVEAVLAGEVLNGIAVVRPPGHHAEQDAACG
FCFFNSVAVAARHAQAISGHALRILIVDWDVHHGNGTQHIFEEDPSVLYISLHRYDHGTF
FPLGDEGASSQMGQAAGTGFTVNVTWNGPRMGDADYLAAWHRLVLPIAYEFNPELVLVSA
GFDAARGDPLGGCQVSPEGYAHLTHLLMGLANGHIILILEGGYNLTSISESMAACTRSLL
GDPPPLLTLTRPPLAGALASITETIQVHRRYWRSLQITKVEDKEGPSSSLLITKKAPQPA
NPGSAKEMITPEGNILDAGRGKATSVSSVEESTAGQTKSETAVVELTQDKSLEAATEEAT
LDQTTSETATGEATLDQTTSEIATGEAKLDQATSETAMGGATLDQTTLGATPGVTTLDQT
TSEAVRGAELIQVPPASSTDNQTPPASPVEGDPPHISPSKLIGNLRTLELDNEAQEAPES
QSPEEERLLGEATGGQDMDDLVLMQSFGDNADTDQAMFYAVTPLPWCPHLVAVSPVPDTG
LDVTQPCQDCGALQENWVCLSCHQVYCGRYINAHMLQHHEGSGHPLVLSYVDLSTWCYYC
QAYVHHQALLDAKNVAHQNKFGEGMPHSH
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagaagacctcgggcacccgcggcgccacaggtcgccgggaatttggcggcggg
agccaagggcggagtttgagaaaggggctgcgctcaaacgtcgtcaggggtgaagcctcc
ccgaccatgacctctaccggccaggattccaccacaaccaggcagcgaaggagtaggcac
aacccccactcccccccccacgactccagcgtcgcctcgaagaggagtgttaagaagggt
gccacactccgctccagccctaatctagcggaggtaaagaagaaaggcagaatgaagaag
ctcagccaagcagccgaccaagacctaatcatggggctgcaagggctggatctgaacctt
gaggccaagacgctgtctggcactggcttggtgtttgatgagcagctaaatgaatttcat
tgcctctgggatgacagcttccctgaaggccctgagcggctccatgccatcaaggagcag
ctgatccaggagggcctcttggaccgctgtgtgtcctttcaggcccggttcgccgaaaag
gaggagctgatgttggttcacagcctagaatatattgatctgatggagacgacccaatac
atgaatgaaagggaactccgcatcctagcagacacctatgactcagtttatctgcatccg
aactcatacacctgtgcctgcctggcctcaggctctgtcctcaggctggtggatgctgtc
ctgggggccgagatccggaatggcatggccatcatcaggcctcctggacaccatgcccag
cacagtcttatggatgggtattgcatgttcaaccatgtggccgtggctgcccgctacgct
caacagaagcatgaaattcagaggatccttatcgtggattgggatgtacaccatggtcaa
ggaacacagttcacctttgaccaggaccccagcgtcctctatttctccatccaccgctat
gagcagggtcggttctggccccaccttaaggcctctgactggtccaccataggttttggc
caaggccggggatacaccatcaatgtgccttggaaccaggtgggcatgcgagatgccgac
tacattgctgctttcctgcacatcctgctgccagtcgccctggagttccagccacagcta
gtcctggtggctgctggatttgatgccctccaaggggaccccaagggtgagatggctgcc
actccagcagggttcgcccacctgacccacctgctcatgggtctggcaggaggcaagctg
atcctgtctctggagggtggctacaacctccgctctctggctgagggtgtcagcgcctcg
ctccacacccttctgggagatccttgccccatgctggaatcccctggtgccccctgcctg
agtgccaaggcatcactctcctgcactctggaagccctggagcccttctgggaggtcctt
gtgagatcagttgagaccatggaggaggacattgtggagggggacaacgtggaggagaaa
gaggagggaccatggcagccccctgcactcccaatcctgacgtggcctgtgctgcaggct
cgcaccgggctggtctatgaccagcggatgatgggtcactacaacttgtgggacagccat
caccccgagatgcctcagcgtgtctcacggatcatgcgccgtctggaggagctgcacctt
gccgagcgctgccttaccctgcccgcacgtcccgccacagatgctgagcttcttacctgc
cacagtgctgaatatgtgggtcgtctacgggccacggagaagatgaaaacccgggagctg
caccgtgagggcgccaactttgactccatctacatctgccccagcaccttcgcctgcgcg
cagctggccactggcgctgtgtgccgcctggtggaggctgtgctggcgggagaggttttg
aatggtattgctgtggtgcgtcccccgggacaccacgcagagcaggatgccgcttgtggt
ttctgctttttcaactctgtagctgtggctgctcgccatgcccaggccatcagtgggcat
gcgctgcggatcctgatcgtagactgggacgtccatcacggtaatggaactcagcacata
tttgaggaggaccccagcgtgctgtacatttccctgcaccgctatgatcacggtaccttc
ttccccctgggggatgagggcgccagcagccagatgggccaggctgcaggcacaggcttc
actgtcaatgtgacctggaacgggccccgcatgggtgacgctgactacctggctgcctgg
catcgcctggtgcttcccattgcctatgagtttaacccagaactggtgctagtctcagct
ggctttgacgctgcacggggtgacccactgggtggttgccaggtgtcgcctgagggctat
gcccaccttacccacctgctgatgggccttgccaatggccacattatcctaatcctagag
ggtggctataatctgacatccatctcagagtccatggccgcttgcacccgctccctcctt
ggggacccaccacctctgctgaccctgacacggcccccactagcaggggccctggcctcc
atcactgagaccatccaagtccatcgcagatactggcgcagcttgcagatcacaaaggtc
gaagacaaggagggaccatccagttctttgttgatcaccaagaaggcaccccaaccagcc
aatcctgggtcagccaaggagatgatcacaccagaagggaacattctggatgcaggcagg
gggaaggccacctcagtatcatctgtagaagagtctactgcaggccagactaagtcagag
acagctgtggtggagctcactcaggacaagtccttggaggcagccacagaggaagccacg
ctggaccagaccacctcagagacagccacaggggaagccacgctggaccagaccacctca
gagatagccacgggggaagccaagctagaccaggccacctcagagacagccatgggggga
gccacgctggaccagaccaccttgggggcaaccccaggagtaaccacgctggatcagacc
acctcagaggctgtcaggggagctgagctgatccaagtccctccagcctcaagcactgac
aaccagactcccccagcctcacctgtggaaggagacccaccccacatatcccctagtaag
ctgattgggaatctcaggaccttggaactagacaacgaggctcaggaggcaccagaatct
cagagccctgaagaggagagactactaggagaggcaactggaggtcaagacatggatgat
ttagtgctgatgcagagctttggggacaatgctgacactgaccaggccatgttttatgcc
gtgacaccactgccctggtgtcctcatttggtggcagtaagccccgtacctgacacaggc
ctggacgtgacccaaccttgtcaggactgtggagcactccaggagaactgggtgtgtctg
tcttgccatcaggtctactgtggtcgttacatcaatgcccatatgctccaacaccatgaa
ggctcaggacaccctctggtcctcagctacgtcgacctgtctacctggtgttactactgt
caggcttatgtccaccaccaggctctcctagatgcgaagaacgtcgcccaccagaacaag
tttggggagggcatgccccactcacactaa
DBGET
integrated database retrieval system
