Elaeis guineensis (African oil palm): 105046724
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Entry
105046724 CDS
T03921
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 1 homolog isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105046724
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egu03019
]
105046724
04121 Ubiquitin system [BR:
egu04121
]
105046724
03036 Chromosome and associated proteins [BR:
egu03036
]
105046724
03400 DNA repair and recombination proteins [BR:
egu03400
]
105046724
Messenger RNA biogenesis [BR:
egu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
105046724
Ubiquitin system [BR:
egu04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
105046724
Chromosome and associated proteins [BR:
egu03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
105046724
DNA repair and recombination proteins [BR:
egu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
105046724
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
BRCT_2
zf-HC5HC2H
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
RTT107_BRCT_5
zf-C3HC4_4
zf-HC5HC2H_2
zf-RING_5
zf-RING_6
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
105046724
NCBI-ProteinID:
XP_019706743
UniProt:
A0A6J0PJS9
LinkDB
All DBs
Position
6:6024528..6036770
Genome browser
AA seq
980 aa
AA seq
DB search
MADLGHLEKMGRELKCPICLSLLSSAVSLSCNHVFCNSCILASMKLIADCPVCKVPFRRR
EVCPAPQMDNLVSIFKCMEAAAGTNIFSTQLAPSAKNSDGLTAGNHDKNSSSAETAVAHQ
GKSMKEGLSRKMQKDNEKSVARNSYGQPSKMPSFPAKKRVRVTPYPVSETPARPDKASGL
RDSSIELNDSKEINKSEKLAMEEQFSPFFWLREEEDNKTPEKPSGQQTADTPPPYNVPCF
SDIKDSDYESPVKLTPTGELQSKPNAVIAFDSEMFEWTQRDCSPELCSTPIKTQTAGRYR
LDAVQEKECQNDLEVGIASSIGVPYENVEIGTVDMKNRRKNNKIQTRHAKLSVPRSRCKV
CNDANKESPTDAVEVAQNSSQENEETDKRSRAFARKILKQCSDPDSHQQTKHLRIATDLL
NNSATTARKRGKETIIESQRKHKNKSIDDSIECIKKSIDDSVTKILEEIPANSVNEAKAQ
NQNRQEKRLEHDKGSHNGCPRRGKKKQEQLGDSKAQRRMKNQTADSVATKNDVQIPPTMS
TSLGENIKTAINPPQESENLVIKNTTMIRCHTLGNNMLRKCENNKFQIQCAFCQSTNDTE
DSGEMMHYFNGKPVTADFNGGVNVIHSHKNCTEWAPDVYFEDDMAINLAAEITRSRRIKC
SCCGIKGAALGCFEKSCRKSFHFTCAKLISECRWDSENFVMLCPLHSSSKLPTETSEPQK
QIRKRDAPIGVSQVSSLTKAGDDTSRMWTWPSGSPCKWVICCSALSVAEKDIISGFAKMT
GVTAAKTWSPMVTHVIASTDKNGACKRTLKFLMAILDGKWILSIDWIKACMEAREPVDEE
AYEITVDVHGISKGPQLGRLRIINKQPKLFNGFSFYFSGEYTPSYKGYLQDLVIAAGGTV
LQRKPISRDQEKLLDDSLTSPVFIIYSLEHPDKNRFQDYTLIFNHRRAEAQALADASGGK
VVANTWIIDSIAACKLQTLS
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atggcagatttaggtcatctggagaagatgggcagagagctcaagtgccccatttgtttg
agcctcttgagctcagcggtatcactttcatgcaaccatgtcttctgcaactcatgcatt
ttggcatcgatgaagttgatagctgattgcccagtttgcaaagttccatttcgtcgaaga
gaagtatgtccggctcctcagatggataaccttgtaagcattttcaagtgcatggaagct
gcagcagggactaatattttttccactcaactagcaccttcagccaaaaattcagatgga
ttgaccgcaggcaatcacgataaaaattctagttcagcagaaactgctgttgcacatcag
ggcaagtcaatgaaagaaggattatccaggaaaatgcaaaaggataatgagaaatctgtt
gccaggaattcatacggtcaaccatcaaaaatgccttctttccccgccaagaaacgggta
cgtgtgacgccataccctgtctcagagactccagcgcgccctgacaaggcttctggatta
agagattcaagcattgagttgaatgatagcaaggaaattaataaaagtgaaaaactggct
atggaggaacagttttcacctttcttttggctgagagaagaagaagacaacaaaactcca
gagaaaccaagcggtcagcagacagcagatacacctccaccttataatgttccttgtttt
agtgacatcaaagactctgactatgaatctcctgtcaaattgactccaactggtgaattg
cagagcaaacccaacgctgtaatagcttttgatagtgaaatgtttgaatggacccaaaga
gattgttctccagaactatgttcaacaccaattaaaacgcagactgcaggtaggtatagg
cttgatgcagtccaagagaaagaatgtcagaatgacttggaggttgggattgcatcaagc
attggagtcccctatgaaaatgttgaaattggaactgttgatatgaagaacagaagaaag
aacaataaaattcaaacaaggcatgcgaaattgtctgtcccaagaagcagatgcaaggtc
tgcaatgatgccaataaagaaagtcctactgatgctgtggaagtagctcaaaattcaagt
caggaaaatgaggaaactgataaacgaagtcgggcttttgcaaggaagatcctaaaacag
tgcagtgatcctgatagccatcagcaaacaaagcatctgagaattgcgactgacctgctt
aacaattctgccacaacagccagaaaaaggggcaaggagaccatcattgagtcacagaga
aagcacaagaataaatccattgatgattccatagagtgcataaagaaatcaatagatgat
tctgtaactaagatacttgaggaaatacctgccaattctgtcaatgaagcaaaagcacaa
aatcaaaatcgtcaggaaaagcgtctagaacatgacaaaggctctcacaacggttgcccc
agaagaggaaagaagaaacaggagcagttaggagactcaaaagcacaacgaaggatgaaa
aatcagactgctgactcagttgcgaccaagaatgatgtccaaattcctcctacaatgagc
acatctttgggtgaaaacattaaaactgccatcaatccccctcaggaatctgagaacttg
gttatcaaaaacacaacaatgatcaggtgtcatactcttgggaataatatgttgagaaaa
tgtgaaaacaacaaatttcagattcaatgtgctttctgtcagtctacaaatgatacagag
gattctggggaaatgatgcattatttcaatggcaagcctgtaactgcagattttaatgga
ggtgtcaacgtcatacattctcataagaattgcacagaatgggcccctgatgtatacttt
gaagatgatatggccatcaaccttgcagcagagataacaagaagtagaaggatcaaatgc
agttgttgtggcatcaaaggggctgctcttggatgctttgagaaaagttgtcgcaagagc
ttccacttcacttgtgctaagttgatttctgaatgccgatgggacagtgaaaattttgta
atgctttgccctcttcattcatcatccaaactgccgactgaaacttctgagccccagaag
caaatcagaaagagagatgctccaataggagtgtctcaagtttcatcattaactaaagct
ggtgatgacacgagtaggatgtggacatggccttctggatcaccttgcaagtgggttatt
tgttgctctgctctttctgttgcagagaaggatatcatctctggattcgcaaaaatgact
ggtgtaaccgcagctaaaacttggagcccaatggttactcatgtcatcgcatcaaccgac
aagaatggggcatgtaaaagaactctcaagttcctgatggccatccttgatggaaagtgg
atattatcaattgattggatcaaagcatgcatggaggccagggaacctgttgacgaggag
gcatatgaaattacagtagatgtgcacggaataagcaagggcccccagttgggaagactg
aggataattaataagcagccgaagctcttcaatggattcagcttttatttcagtggagag
tacacgccatcttataaaggttatctgcaagatcttgtcattgctgcaggaggcactgtt
ttgcagaggaagcccatttcaagagaccaagagaaattgttggatgactccttgacttcc
ccagtcttcataatatacagccttgagcatccagacaaaaacagattccaagattacact
ttgatttttaaccataggagagctgaagctcaggcacttgctgatgcttctggaggcaaa
gtggtagccaatacatggatcatagactccattgctgcttgcaaattgcaaactctaagt
tga
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