Egretta garzetta (little egret): 104124163
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Entry
104124163 CDS
T05152
Symbol
BARD1
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
egz
Egretta garzetta (little egret)
Pathway
egz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
egz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104124163 (BARD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egz03019
]
104124163 (BARD1)
04121 Ubiquitin system [BR:
egz04121
]
104124163 (BARD1)
03036 Chromosome and associated proteins [BR:
egz03036
]
104124163 (BARD1)
03400 DNA repair and recombination proteins [BR:
egz03400
]
104124163 (BARD1)
Messenger RNA biogenesis [BR:
egz03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
104124163 (BARD1)
Ubiquitin system [BR:
egz04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
104124163 (BARD1)
Chromosome and associated proteins [BR:
egz03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
104124163 (BARD1)
DNA repair and recombination proteins [BR:
egz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
104124163 (BARD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_4
Ank
Ank_2
Ank_5
Ank_3
zf-RING_6
BRCT
BRCT_2
NIBRIN_BRCT_II
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
104124163
NCBI-ProteinID:
XP_009634771
LinkDB
All DBs
Position
Unknown
AA seq
868 aa
AA seq
DB search
MVFAGAKQFRRCNDTDLIKAAYATIQISVTEFHSVTQQLAPNNSSKFSQIDGAERFYDPV
WLITLYGGGGGCASGSTTSNSATCKKWEIGLNPHVLLDAQAEEKATLETQIMGDLRPTFL
ENEIWSVLIFAPSDLSMSSGICQSQELSCVGDCVGTECPVCHMPAWVQDAQINRQLDNMI
QLCSKLRHLLGADTSDSTEDMSTPTDSDFGKKNKKEQIKMWFSPRSRKIRCILNKSQCET
KSSDLCQDTASIYDFFPSPPHEKPSEVTKKPTQRQSKKMKKKRLADINRVWSLERPEQKG
GVEEKTAKEKCVTICSQPVVLCTPEPNSPEETPQQESVKEADSSKNTENVEIPPQVKSSE
KKDNSEVVCPAQVSKEKSCATETSLSIESKTTPLKRRREQFRFPATSQSKRPRRTESSIT
GKSVSQADCLEELPQGCPISPETEHKTPVQISSSVLKLTDTVMKTRSSAVFQAINNPSLS
KSPSTPSTSNTCNQVGIPHSPSVSKSPGGNTIARRNYKGETLLHVASIKGDLVAVEQLLQ
NGADPNVKDNAGWTPXHEACNHGHKEVVELLLQHKALVNTTGYQNDSPLHDAAKNGHVNI
VELLLLHGASRDAVNIFGLRPVDYAESEKMKSVLMLPVKNESFSLNQPSEALSPSQPRDG
PLGILGSNLSSEQHKLLNKLATVLKAQRCTEFNNRVTHLVIPDVPMPSTVKCMMAVLTGC
WVLKFEWVRACLQSTVREQEEKYEIQGGPRRGRLNREQLLPKLFDGCYFYFLGSFNRHQK
SELVELVKAAGGQILVRQPKPDSDVTQTINTVAYHAESTSDQRFCTQYVIYDVSSKFKPE
KIRQGKVWMAPSSWLIDCVMSFQLLPVK
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atggtgtttgctggggccaagcagtttaggagatgcaatgacactgatttaataaaggct
gcatatgccactattcaaatcagcgtgacagagtttcactctgtgacacagcagcttgcc
ccgaacaacagcagcaaattttctcagatcgatggagcagagagattttatgatcctgtg
tggctaattacactgtacgggggaggcgggggctgcgcctctggaagtaccacctcaaac
tcagcaacctgtaaaaagtgggagattgggctgaaccctcacgtgctgctcgacgcacag
gctgaggaaaaagccacgcttgaaacccaaatcatgggagacctgaggccaactttccta
gagaatgagatctggtcggttcttatctttgcaccaagtgatttgtcaatgtcatctgga
atatgtcagagccaagaattatcttgcgtgggtgactgtgttggcacagaatgcccagtg
tgccacatgccagcctgggtgcaagatgcacagataaaccggcaactagataatatgatc
cagctttgcagcaaactgcggcatctactgggtgcggacacatcagattcaacggaagat
atgtccacaccaactgactcagactttggaaaaaagaataagaaagaacagataaaaatg
tggttcagcccaagaagtaggaagattcgatgcatcctgaacaagagtcagtgtgagact
aaaagcagcgacctttgtcaagacacagcttcaatttatgatttctttccttcccctcct
catgaaaagccctccgaggtgacaaaaaagccaacacagagacagagtaagaagatgaag
aagaaacgtctagcagacattaacagagtgtggagcttagagaggcctgaacagaaagga
ggagttgaggagaagactgccaaggaaaagtgtgtgaccatctgcagtcagccggtagtc
ctgtgcactccagaaccaaatagccctgaagagacacctcagcaggagtctgtaaaggaa
gctgactccagcaaaaacacagaaaatgtggaaataccgccacaggtaaaatcctcagag
aagaaagacaacagtgaggttgtgtgccctgcacaagtcagcaaggaaaaaagttgtgct
acagagacatcactgtcaatagaaagtaaaactacacctttaaaacgtagaagggagcaa
ttcagatttccagctacttctcagtctaaaagaccaagaagaactgagagcagcattact
gggaagtcagtcagtcaggcagattgcttagaggagttacctcagggttgccccatctcc
ccagagactgaacacaagacaccagttcagatttcttcctctgtattgaaactcactgac
actgtaatgaagacaagaagttctgcagtatttcaagcaataaataatccttcactttca
aaatctccctctaccccatctacttctaacacctgtaatcaagttggaataccacacagt
ccttctgtgtcaaagtcccctggtggtaacacaattgccagaagaaattacaaaggagag
actttgctccatgttgcttccatcaagggtgacttagtagctgttgaacaactgctgcaa
aatggggcggatcccaatgtcaaagataatgctggctggacaccanagcacgaggcatgt
aatcatgggcacaaagaagtggtggagctgttgctacaacacaaggcgctagtgaatact
acagggtatcagaatgactcgccacttcatgatgctgccaagaatgggcatgtgaacatt
gttgagctgctgcttttgcatggtgcctcccgtgatgcagttaatatatttggtctgcgg
cctgtggactatgcagaaagtgaaaagatgaagtctgtgctaatgttaccagtgaagaat
gaatcattttcacttaaccaaccctctgaggcactgagccccagccagccaagagatgga
cctcttggtatactggggagcaatcttagttcggagcaacataaattgctgaacaaacta
gcaacagttctgaaggctcaaaggtgtactgaatttaacaatagagtaactcatcttgtt
atccccgatgttccaatgccaagtactgtcaaatgtatgatggctgttctgactggatgt
tgggtcctcaagtttgaatgggtacgagcctgtctacaaagcacagttcgagaacaagaa
gagaagtatgaaatccaaggtggcccgcgaagaggccggctcaacagagaacagctgctg
cctaagttgtttgatggatgctacttctattttttgggatctttcaaccgtcaccagaag
agtgagcttgtggagttggtcaaagcagcaggaggacaaattctggttaggcagccaaaa
ccagacagtgatgtgacacagacaatcaacacggtggcttaccatgcagaatctacttct
gaccagagattttgcactcagtatgtaatctatgatgtgtcttctaaattcaagccggag
aaaattcgtcagggcaaagtctggatggccccctccagctggcttatagactgtgtgatg
tcatttcagctcctgcctgtaaaatga
DBGET
integrated database retrieval system
