Esox lucius (northern pike): 105014301
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Entry
105014301 CDS
T04894
Symbol
polb
Name
(RefSeq) DNA polymerase beta
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
els
Esox lucius (northern pike)
Pathway
els03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
105014301 (polb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
els03400
]
105014301 (polb)
Enzymes [BR:
els01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
105014301 (polb)
DNA repair and recombination proteins [BR:
els03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
105014301 (polb)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
105014301 (polb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
HHH_8
DNA_pol_lambd_f
HHH_5
HHH_2
NTP_transf_2
Cdd1
DUF4806
Motif
Other DBs
NCBI-GeneID:
105014301
NCBI-ProteinID:
XP_010874808
UniProt:
A0A3P8ZSL7
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All DBs
Position
LG13:complement(17737644..17747196)
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AA seq
336 aa
AA seq
DB search
MSKRKAPQESPNEGITDFLTELANYERNVNRAIHKYNAYRKAASSISKYPQKLRNGDEAK
KLDGVGKEIAKKIDEFLQTGTLKKLEKIRNDDTSSSINFLTRVTGIGPAAARKFFDEGVK
TLEDLKNIEHKLNHHQQIGLKYFEEFEKRIPRAEMTKMETLILQELKLVDTEYIGTICGS
YRRGAESSGDIDILLTHPKYTSVDEKQPKLLHAVVEHFESIGFITETLSKGDTKFMGVCQ
LQQNAEDEEEYLHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRTHALEKGFTLNEYTIR
PVGVTGMAGEPLMVDSEKDIFDYIQWKYREPKERSE
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaaggaaagcaccacaggaatccccaaacgaggggataacagactttcttacc
gaattggccaactatgagaggaatgtcaacagagctatccacaagtacaatgcatacagg
aaagcagcttcttcgatctccaagtacccccagaagttaagaaatggggacgaggccaag
aaactggatggggttggaaaagagattgccaaaaagatagatgaattcttacaaacagga
acactcaagaagctggaaaagattcgtaatgatgacaccagctcctccattaacttcctt
accagagtcactggtattggacctgctgctgccaggaagttctttgatgagggagtgaag
accctggaagatctgaagaacattgaacacaagctcaatcatcatcagcagattggactc
aagtacttcgaggagtttgagaagaggattcctcgagctgagatgacaaagatggagaca
cttattctacaggagctgaagttggtggatactgagtacattgggaccatctgtggaagc
tacaggagaggtgctgaatcaagtggggatattgatatcttgctgacccaccctaagtac
acttctgtggatgagaaacagccaaaacttctccatgctgtggtagagcattttgaatcc
attggtttcattacagaaacactatcaaaaggagacaccaaattcatgggagtttgtcag
ctgcagcagaatgctgaagatgaagaggagtatcttcataggcgcattgatataaggtta
attcctaaggaccagtattactgtggtgtgttgtatttcactggcagtgacatatttaat
aagaacatgaggactcacgctctggagaaaggcttcaccctcaatgagtacaccatccga
ccagtgggggtcactggtatggctggggagcctctcatggtggacagtgagaaggacatc
tttgactacatccagtggaaatacagagagcccaaagaacgcagcgagtga
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