Esox lucius (northern pike): 105016143
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Entry
105016143 CDS
T04894
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
els
Esox lucius (northern pike)
Pathway
els03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105016143
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
els03019
]
105016143
04121 Ubiquitin system [BR:
els04121
]
105016143
03036 Chromosome and associated proteins [BR:
els03036
]
105016143
03400 DNA repair and recombination proteins [BR:
els03400
]
105016143
Messenger RNA biogenesis [BR:
els03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
105016143
Ubiquitin system [BR:
els04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
105016143
Chromosome and associated proteins [BR:
els03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
105016143
DNA repair and recombination proteins [BR:
els03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
105016143
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank
Ank_2
Ank_4
zf-RING_6
Ank_5
Ank_3
BRCT_2
BRCT
zf-RING_5
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
105016143
NCBI-ProteinID:
XP_010878083
UniProt:
A0A3P8XTC2
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All DBs
Position
LG16:25286335..25319126
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AA seq
809 aa
AA seq
DB search
MYPNNCKTPSWTKTKEAAADFRKLLLCSKCSKLMNEPVCLGVCEHLLCRLCAGPQAGAGC
VVCHSPAWVKDIQINRQLCNITELFSNLDSLLNPTGPEDSDVLISSPVQSENSVLKHKKS
FKIWFSPRSRKVRCHVERPVEVSQLSEHKTVRGKTAPRPTNTAAECNLKDLSVFNFSSSS
QDSGTSSLQKASDRGKKKKKKTTATNGGGNIRKHAAGGFQKPTTRKESDQRVKTQRLEAI
NQQWGFGGQGDGREGEQVSVEELEQRSSKRVSFQSLAPPSATVEPQGDTVFLSPSKSILK
VGQPVEKLPFSVDLYDPSPHTHSQQDMLPVNHHSKLNEETTTLPGQSSTKRPPKRSQAEE
TNALQSTPKRPKASPGQGRRPAEVRVPPLALPTSPSSLSASSIQMNTPNTRRTKGGDNQR
GNGTCSPASSGRSPGNRSPRSPGAVKRNHKGETPLHLAAIKGDVEAVKMLLDQGADPNLK
DNAGWTPLHEACNLGHQGVVEVLVSRGVLLNTPGYENDSPLHDAVRNGHTGIAKLLLQHG
ASQGVLNMYGLRPVDYAVTPEMRAVIRAASEGPHLGNSPLSSPPGLSKASEEVIQEKPVV
LLGSKLSKSQQSQLTKLGKLLGGKKADTFSCSVTHVVVPDPATPSTLSTLLGLLNGCWVL
NFSWVEACLQRVGWTAETDHEVGEGPQRSRVNRHSLLPPLFDGCFFYFHGSFRKHAKDEL
LRMVKEAGGQVLTRQPKPDSDVTQTLPAAAYHASPGSDQALCTQYIIYDPQGPYRPPRLR
LGKVWSAPSTWVVSCILAFQLLPVPEPEP
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgtatccgaataattgcaagacaccaagctggacaaaaactaaggaggctgccgctgat
tttcgaaaacttctgctgtgctcgaaatgctcaaaactgatgaacgaacccgtgtgcctc
ggagtttgtgaacatttgctttgcaggctatgtgctggacctcaagctggagcaggctgt
gtggtctgtcacagtcctgcttgggtgaaggacatccaaatcaacagacagctttgcaac
atcacagaactcttctccaacctagactcactgctcaatcccactggccccgaggactct
gacgttctaatttcatcaccagtacagtcagagaactctgtgctaaagcacaagaagagc
ttcaagatttggttcagtccccggagccgcaaggtgcgttgtcatgtagagagacctgta
gaggtatcccaactatcagagcataagacggttagaggtaaaactgccccaagaccaacc
aacacagctgctgagtgcaatttgaaggatctgtcagtcttcaacttcagctcctcctcc
caagactctggcacctcttctctgcaaaaagcctccgaccggggcaagaagaagaagaag
aagacgacggcgacgaacggtggtgggaatatcagaaagcatgcagccgggggttttcaa
aagccaacgacacgaaaagaatctgaccagagggtcaagacacagaggctagaggcgatc
aaccagcagtggggatttggtggacaaggagatggtagagaaggagagcaggtcagtgtt
gaggaattggagcagaggtctagtaaaagagtgtccttccaaagcctcgcccccccgtct
gccactgtggagccccagggagacactgtgttcctcagccccagcaaaagtatcttgaag
gtgggtcagccagtagagaaactccccttctctgtggacctgtatgatccaagcccacac
acccattctcagcaggatatgctgcctgttaatcatcactccaaactcaatgaggaaaca
actacactgcctggccaatcctcgaccaagcgtcctcccaaaaggtcccaggcagaagag
acgaacgccttgcagagtaccccaaagagaccaaaggcctctcccggccagggaagacgc
ccagcagaggtgagggtcccccctctagccctgcctacctctccctcttccctttctgcc
agctccatacaaatgaatacccccaacaccagaagaaccaaaggaggagataaccagagg
ggcaatggcacgtgttccccagcctcctcggggagatcgcctggaaaccggtctccgagg
agcccaggagcagtgaagaggaaccacaagggagaaacacccctgcacctggccgctatt
aagggagatgtggaggcagtgaagatgctcctagaccagggggctgaccccaacctgaaa
gacaatgctggatggaccccactgcacgaggcctgtaatctgggccaccagggtgtagtg
gaggtgctggttagtaggggggttctgttgaacacgcctggctatgagaatgactctcct
ctgcatgacgcagtgaggaatggacacacgggcatcgccaagcttctgctgcagcacggg
gcttcacagggcgtgttaaatatgtatggccttcgtcctgtggactacgccgttacccct
gagatgcgtgccgtaattcgggcagcttctgaaggaccacacctaggcaactctcctctc
agttctcctcccgggctaagtaaggccagtgaggaggtgatacaggaaaaacctgtggtt
ctactgggcagtaaactgtccaagtcccagcagagccagctgactaaacttggaaaactc
cttggaggaaagaaggcagacaccttctcttgctcagtcactcacgtagtggtaccggac
ccagcaacacccagcaccctgtctactctcctgggtcttttaaatggctgctgggtcctc
aacttcagctgggtggaggcgtgcctgcagagagttggctggacagccgagactgaccat
gaagtgggagaaggtcctcaacgcagtcgcgttaaccgacatagcctgctacctccgctg
ttcgatggatgtttcttctacttccatggctccttcaggaagcatgcgaaagatgagctt
ctccggatggtgaaagaggcagggggccaggttctgactcgacagcccaaaccggacagc
gatgtgactcaaactctgcctgctgccgcctaccacgcctctccaggctcagaccaagcc
ctttgtacccagtacatcatctatgacccccagggaccctaccggccccccaggttgagg
ttaggaaaggtgtggtctgccccatctacatgggttgtgagttgtatattagcctttcaa
ttgcttccagtgcctgagccggaaccatag
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