Empidonax traillii (willow flycatcher): 114060663
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Entry
114060663 CDS
T05887
Symbol
BARD1
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
114060663 (BARD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
etl03019
]
114060663 (BARD1)
04121 Ubiquitin system [BR:
etl04121
]
114060663 (BARD1)
03036 Chromosome and associated proteins [BR:
etl03036
]
114060663 (BARD1)
03400 DNA repair and recombination proteins [BR:
etl03400
]
114060663 (BARD1)
Messenger RNA biogenesis [BR:
etl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
114060663 (BARD1)
Ubiquitin system [BR:
etl04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
114060663 (BARD1)
Chromosome and associated proteins [BR:
etl03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
114060663 (BARD1)
DNA repair and recombination proteins [BR:
etl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
114060663 (BARD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_6
Ank_5
Ank
BRCT
Ank_2
Ank_4
BRCT_2
Ank_3
zf-RING_5
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_4
zf-RING_UBOX
Siva
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
114060663
NCBI-ProteinID:
XP_027746148
LinkDB
All DBs
Position
Unknown
AA seq
780 aa
AA seq
DB search
MRQALCGRSGNQPAPAGHPRTADPTMASSGQPWSRTRAALGRLERALSCSRCAGVLRQPV
SLGQCEHVFCLSCVGDCVGTECPVCHVPAWLRDAQINRQLDSMIQLCSKLRELLGTDTPD
SAEDASTPTDSDLGKSSKKEQIKMWFSPRSRKIRCVLNKSHHETKSSDPGGDTSSVYDFF
PSPPHEKPPEPTKKPTQRQIKRMKKKRLADINKVWSLEKPGQKGVEEKTPKEKCVTICSQ
PVILCTPELESPEETPRQEAVKENDSSKDTGNVEVPPQVESPENKDNSEVVCPAQESKEN
SCAPEMSLSAENETTLLKRGREQPGLQGTPQPKRLRRSERGSAGKAGRQADCLEELLQGS
PISPATEHQAPVQVSSSASKLTGAARKTRSSAVLQATDSPSLSESPSIPSTPKTCSQVSV
PFSPLLKSPGGNTISRRNYKGETLLHVASIKGDVAAVEQLLTNGADPNVKDNAGWTPLGD
VAAVEQLLTNGADPNVKDNAGWTPLPVSISAAKFVVLNEQWLDLSGNIFGLRPVDYAESE
KMKSVLMLPVKNESLSLNQPSEALSPSQPRNGPLGLLGSSLSAEQQKLLNKLAAVLKARR
CTEFNSGVTHLVIPDVPMPSTVKCMMAVLSGCWVLKFEWVQACLRTSAREQEEKYEIQGG
PQRGRLNREQLLPKLFDGCYFYFLGSFKRHPKGDLAELVRAAGGQVLVRQPKPDSDVTQA
VNTVSFHAEPRSDQRFCTQYVIYDAASKFKPEKVRQGKVWMAPSSWLIDCVMAFQLLPVT
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgaggcaggcgctgtgcggccgctcgggcaaccagccggccccggccggccacccccgc
actgccgaccccaccatggcatcgtccgggcagccctggtcccgcacccgcgccgcgctg
gggcggctggagagggcgctgagctgctcccgttgcgccggcgtcctgcggcagcccgtg
tccctggggcagtgcgagcacgtcttctgcctgtcctgcgtgggtgactgtgtgggcacg
gagtgccccgtgtgccacgtgccagcctggctgcgggatgcccagatcaaccggcagctg
gactccatgatccagctgtgcagcaaactgcgggagctcctgggcacggacacccccgat
tcagcagaagatgcatccacaccaactgactcagacttgggaaaaagcagcaagaaggaa
cagataaaaatgtggttcagcccaagaagtaggaagattcgatgtgtcctgaacaagagt
catcatgagaccaaaagcagtgaccccggtggggacacatcttcagtttatgatttcttt
ccttcccctccacacgagaagccccctgagccgacaaaaaaaccaacccagaggcagatt
aagaggatgaagaagaaacgtctggcagacattaacaaagtgtggagcttagagaagcct
gggcagaagggagttgaggagaagactcccaaggaaaagtgtgtgaccatctgcagtcag
ccggtgatcctctgcactccagaactggagagtcctgaagagacacctcggcaggaggct
gtgaaggaaaatgactccagcaaagatacaggaaatgtggaagtgccaccacaggtcgaa
tccccagagaacaaagataacagtgaggttgtgtgccctgcacaagagagcaaagaaaac
agctgtgctccagagatgtccctgtcagcagaaaatgaaactacgctgttaaaacgtggg
agggaacaacctgggcttcagggcactcctcagcctaaaagactgaggagatctgagagg
ggcagtgctgggaaggcaggcaggcaggcagattgcttggaggagctacttcagggctcc
cccatctccccagcgactgaacaccaggcaccagttcaggtttcttcctctgcatcaaaa
cttactggcgctgcaaggaagacaagaagctctgcagtccttcaagcaacagatagtcct
tcgctttcagaatctccctctatcccatctactcctaagacttgcagtcaagtatcagta
ccattcagtcctctgttgaaatcccctggtggcaacacaatttccagaagaaattacaaa
ggagagactttgctccacgttgcttccatcaagggtgacgtagcagccgtggagcagctg
ctgacaaacggggcagaccccaatgtcaaggataatgctggctggacaccactgggtgac
gtagcagccgtggagcagctgctgacaaacggggcagaccccaatgtcaaggataatgct
ggctggacaccactgcctgtcagtatttcagccgccaaatttgtagtcctaaatgagcag
tggttggatttgtctggtaatatatttggtctgcggcctgtggactatgcagaaagtgaa
aagatgaagtctgtgctaatgttaccagtgaagaatgaatcactttcgcttaatcaaccc
tctgaggcactgagccccagccagcctagaaatggccctcttggtttactgggaagcagt
ctcagtgcagagcagcagaagttgctgaacaaattagcagcagttctgaaggctcgaaga
tgtactgaatttaacagtggagtaactcatcttgttatccctgatgttccaatgccaagt
actgtcaaatgcatgatggctgttctgagtggatgttgggtcctcaagtttgaatgggtc
caagcctgcctgcgaacctcagctcgagagcaagaagagaagtacgaaatccaaggtggc
ccccaaagagggcggctcaacagagagcagctgctccctaagttgtttgacggatgctac
ttctatttcctgggctctttcaaacgccacccgaagggcgatctggcggagctggtgaga
gcggcgggcgggcaggtcctggtgcggcagcccaagccggacagcgacgtgacgcaggcg
gtgaacacggtgtcgttccacgccgagccccgctccgaccagcgcttctgcacccagtat
gtcatctacgacgcggcctccaagttcaaaccggagaaggtgcggcagggcaaggtgtgg
atggccccctccagctggctgattgactgcgtgatggccttccagctcctgcccgtcaca
tga
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integrated database retrieval system
