Eutrema salsugineum (saltwater cress): EUTSA_v10006912mg
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Entry
EUTSA_v10006912mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K10683
BRCA1-associated RING domain protein 1
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EUTSA_v10006912mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eus03019
]
EUTSA_v10006912mg
04121 Ubiquitin system [BR:
eus04121
]
EUTSA_v10006912mg
03036 Chromosome and associated proteins [BR:
eus03036
]
EUTSA_v10006912mg
03400 DNA repair and recombination proteins [BR:
eus03400
]
EUTSA_v10006912mg
Messenger RNA biogenesis [BR:
eus03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
EUTSA_v10006912mg
Ubiquitin system [BR:
eus04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
EUTSA_v10006912mg
Chromosome and associated proteins [BR:
eus03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
EUTSA_v10006912mg
DNA repair and recombination proteins [BR:
eus03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
EUTSA_v10006912mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
zf-HC5HC2H
BRCT_2
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-RING_5
zf-RING_2
zf-HC5HC2H_2
zf-RING_10
zf-RING_6
Prok-RING_4
PTCB-BRCT
RTT107_BRCT_5
Peptidase_C98
zf-Nse
Motif
Other DBs
NCBI-GeneID:
18994461
NCBI-ProteinID:
XP_006418176
UniProt:
V4KYU0
LinkDB
All DBs
Position
Unknown
AA seq
738 aa
AA seq
DB search
MAGFTNMLMNPWVLHLQKLGLELKCPLCLKLLNRPVLLPCDHVFCESCIHKSSQVESSCL
VCKSKYPKKARRNLHIMESVISMYKSLNAAVSVHLPQLQNQNDGNYKNDAQNNSSSQKDG
GSEDSEMIDKDVIKRSGGGSNSSSHDGSPLPTSQESNQRPKHQDWSKQQIVDPLPLYEFE
SANDAGNHTPESHTGPAAKSLSDITVSEKPDKAARRRICGDSLSHDDSPLPKSQESNPNP
KTQDLTERLLMESLRSYDFQPESDNDPTDHIKAEKRQLSKSHTEQAAKRKRDTTASEAME
NHQKYPKRQKNLMQKAADVDFNDNYTANSDDQLIGKPSKASNLTPSVISDQPSSNITICG
FCQSDRVSEATGEMLHYSRGRPVVGDDIFRSNVIHVHSACIEWAPQVYYEADTVKNLKAE
LARGMKIKCTKCGLKGAALGCYVKSCRRSYHVPCARGISRCRWDYEDFLLLCPAHSSVKF
PNEKSGHRVSRAEPLPKINPAELCSLEKTPAITKDLVLCGSALSQSDKRLMETLAAKLNA
TISRYWNPSVTHVIASTDEKGACTRTLKVLMGILNGKWIINAGWIKASLEASQPVDEEPF
EIHIDTQGCHDGPKTARLRAATNKPKLFDGLKFYFFGDFCKGYKEDLQNLVKVAGGTILN
TEDELGAESSNNVNDQRSSIVVYNIDPPIGCALGEEVTIIWNRANEAEALSSKTGSRVVG
HTWLLASIAGYKLHPMAS
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggcgggatttaccaacatgttgatgaatccatgggttctccatctccagaagctcggg
ctcgaactcaagtgccctctatgcttgaaattgcttaatcgaccggtgttgcttccttgt
gatcacgtcttctgcgaatcatgtatacacaaatcgtcgcaagttgaatcaagctgtctt
gtttgcaaatctaaatatcccaaaaaggctcggaggaatcttcatatcatggagagtgtg
ataagcatgtacaaaagcttgaatgcagctgttagtgttcatctcccacagctacagaat
cagaatgatggcaactacaagaacgatgcacagaacaattccagcagccaaaaagacggt
ggatctgaagattctgagatgattgacaaggatgtgatcaagcgaagtggtggtggtagt
aattcatctagtcatgacggttctccacttccaacgtcacaagaaagcaatcaaagacct
aagcatcaggactggtctaagcagcagatagtcgatcctctcccgttatatgagttcgaa
tctgcgaatgatgctggcaatcatacacctgaaagtcatacaggaccagctgcaaaaagc
cttagcgacatcactgtttctgagaagcctgacaaggctgcaaggaggcgaatttgtggt
gattcccttagtcatgatgattctccgcttccaaaatcacaagaaagcaatccaaatcct
aagactcaggatctgactgagcggctattgatggagagcctccggtcatatgattttcag
cctgaatcagacaatgatcccactgatcatataaaagcagagaaacgtcagttatccaaa
agtcatacagaacaagctgcgaaaaggaagcgtgacaccactgcttctgaagcaatggaa
aatcatcagaaataccccaagaggcagaagaatttgatgcaaaaagctgctgatgttgac
ttcaacgacaactacactgcaaactctgatgatcagctaattggaaaaccctccaaggca
tcaaatttgaccccatctgtaatttcagatcagccatcatccaacataaccatatgtgga
ttttgccaatctgatagggtatctgaggccactggagaaatgctgcattattccagggga
aggccggtggttggagatgacatcttccgctccaatgttatccatgtccatagcgcatgt
atcgaatgggcaccgcaagtatactatgaagctgacacagtgaagaacctgaaagcagaa
ctggcaagggggatgaaaatcaagtgcaccaaatgtggtctgaaaggggctgccttaggc
tgctatgtcaagtcttgccgcaggagctaccatgttccatgtgcacgggggatttccaga
tgccgttgggattatgaagactttcttctgctttgtccggctcattcttctgtcaaattc
ccaaatgagaagtctggacatcgcgtatccagagctgagcccttaccgaaaataaatcct
gctgagctttgttctctggaaaaaaccccggctattacaaaagaccttgttctctgtgga
tcagcactctctcagagtgataagcgactgatggaaactttagccgccaaactcaatgca
accatatcaaggtactggaaccctagtgttacgcatgtgattgcttctacagacgagaaa
ggagcttgcacaagaactttaaaggttcttatgggtattctcaatggaaaatggattatc
aatgcaggctggattaaagcaagccttgaagcttctcaacctgttgatgaagaaccattt
gagattcatattgacactcaaggatgtcatgatggaccgaaaaccgcaagactcagagcg
gcaactaataaaccaaagctctttgatggcttgaaattctatttctttggagacttctgt
aaaggatacaaagaagaccttcaaaacctagtcaaagtcgctggtggtacgatcttgaac
acagaggatgagcttggcgcagagagcagcaacaatgtcaatgaccaacgatcatcgatt
gtggtttacaacattgatcctccaattggatgtgctttgggtgaagaagtcacgattatt
tggaaccgagcaaatgaagcagaagctttatctagcaaaactggatctcgggtcgttggt
cacacatggctcttggcttctatagctggttacaagttgcatcctatggctagctaa
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