Flavobacterium collinsii: TRV642_4248
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Entry
TRV642_4248 CDS
T08703
Name
(GenBank) D-alanyl-D-alanine dipeptidase
KO
K08641
zinc D-Ala-D-Ala dipeptidase [EC:
3.4.13.22
]
Organism
fcs
Flavobacterium collinsii
Pathway
fcs01502
Vancomycin resistance
fcs02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
fcs00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
TRV642_4248
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
TRV642_4248
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
fcs01002
]
TRV642_4248
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fcs01011
]
TRV642_4248
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
fcs01504
]
TRV642_4248
Enzymes [BR:
fcs01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.13 Dipeptidases
3.4.13.22 D-Ala-D-Ala dipeptidase
TRV642_4248
Peptidases and inhibitors [BR:
fcs01002
]
Metallo peptidases
Family M15: zinc D-Ala-D-Ala carboxypeptidase family
TRV642_4248
Peptidoglycan biosynthesis and degradation proteins [BR:
fcs01011
]
Peptidoglycan biosynthesis and degradation
Carboxypeptidase
TRV642_4248
Antimicrobial resistance genes [BR:
fcs01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
TRV642_4248
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M15
VanY
Motif
Other DBs
NCBI-ProteinID:
CAI2768929
UniProt:
A0A9W4TJU8
LinkDB
All DBs
Position
TRV642:complement(4878539..4879198)
Genome browser
AA seq
219 aa
AA seq
DB search
MQLSLSRTLLLLFSLFFCAFSSNAQNETHSSEDRDEIADTTFVNLRDYSKDFVYDMKYAT
EDNFLKAKVYDCAECLLRYKTVKALIAANHDFMKNGCKIKLFDCYRPLSIQKKMWEIVSN
PEYVADPKKGSIHNKGGAVDITLVNAKGEELEMGTNFDFFGIQASHNYKKFPVSVRANRK
YLKSVMIKNGFNSFDSEWWHYNLKTGLNDKVSNQKWKCD
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgcaactgtctttatctcgtacattattacttctttttagtcttttcttttgtgcgttt
tcttcgaatgctcaaaatgaaacccattcctctgaggacagagacgaaattgccgatact
acttttgtaaacctaagagattacagtaaggatttcgtctatgatatgaagtacgctact
gaagataattttttgaaggccaaagtttacgattgtgccgaatgtttgttgcgttataag
actgtgaaagctctaatagcggcgaatcatgattttatgaagaatggatgtaaaataaaa
ctttttgattgttacagacctttatccatccagaaaaaaatgtgggagattgtgtcgaat
ccggagtatgtggctgatccaaaaaaaggctccatccataataaaggaggagccgttgat
attactttagtcaatgctaagggtgaggaactggaaatgggaactaattttgatttcttt
ggcattcaggccagtcataattataaaaaatttcctgtgtcggttagagcaaatcgaaaa
tatttgaaaagtgtgatgataaaaaacggattcaattcttttgattcggagtggtggcat
tataacttaaagacaggtttaaatgataaagtatccaaccaaaagtggaaatgcgattaa
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integrated database retrieval system