Frankliniella occidentalis (western flower thrips): 113212609
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Entry
113212609 CDS
T07591
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
foc
Frankliniella occidentalis (western flower thrips)
Brite
KEGG Orthology (KO) [BR:
foc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
foc01009
]
113212609
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
foc03019
]
113212609
04131 Membrane trafficking [BR:
foc04131
]
113212609
03036 Chromosome and associated proteins [BR:
foc03036
]
113212609
Enzymes [BR:
foc01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
113212609
Protein phosphatases and associated proteins [BR:
foc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
113212609
Messenger RNA biogenesis [BR:
foc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
113212609
Membrane trafficking [BR:
foc04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
113212609
Chromosome and associated proteins [BR:
foc03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
113212609
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
Motif
Other DBs
NCBI-GeneID:
113212609
NCBI-ProteinID:
XP_026287181
UniProt:
A0A6J1T919
LinkDB
All DBs
Position
Unknown
AA seq
1093 aa
AA seq
DB search
MSTLRTETSNTDGGLRRSHRLNSGQPAKQPTKVSAALLAAKRKAKQRNMNKKQNDIIRDI
YQNAMDSKSMFHKPTGLVYDRRMAEHRCMWDSTYPECPERLTRVLERCEELGLVQCCKEI
LPREATEKELLSKHTPEQIAILKATENVSDEQYLENLSSKYDAIYIHPSTYRLSLLAAGS
TIELVENICKGAVQNGMAIVRPPGHHAMKSEYCGYCFFNNVAIAANHALENLGLSRILII
DWDVHHGQATQQMFYDDPRVVYFSIHRYEHGTFWPNLRESDFDYVGKNMGAGFNFNVPLN
ATGMADADYLAIFQQVLLPMACEFQPELIIVSAGYDAAIGCPEGEMELTPACYAHLINSL
SALANGKLAVVLEGGYCLRSLAEGAALTLRALLGHPTPSLPPMAPPSDVIRNTILDVIYS
HRPFWNCFQLQDTWSLSEQENKDPLVSLPARHIPRAIFLGPTGPPPSSFETRNCYPVQSS
VFLMSVASKLNSLISSTKLINPVNKLSIVYDARMLKHFNRGETSHPERPERVSSIYSMLE
DFEVLQRCNLVPSRVATEEELLLVHTQDHVSAMQSLATKSEDELDKQQKKMRSVYLHNSS
YESASVAAGCVFQVVDAVLSGESASGVAVVRPPGHHAESDNACGFCVFNNVSLAAKYALE
KHGLSRILLVDWDVHHGNGTQHIFESDPRVLYISLHRYDNGSFFPGSLDAGHDKVGLGKG
EGFNVNIPWNKKGMNDGDYITAFHQIVLPIAYQFNPELVLVSAGFDAAVGDPLGGCKVSP
ECYGHMTHWLHGLAGGRTILCLEGGYNLNSISYAMTMCCKALLGDPLPMLEKGSVASLNG
IQTIRTVCSVQEKYWPCLRFQVALPVEDDILSSQESTEDLSRMLAKVELTEREISMNHPK
DGEASRAIKLVVDSGDVASYARTCAPDRSQGNSSSGAGPSSGGSGEGSSLGSARGGDGSR
PTLVDYLSENMQMLVEERMFAVVPLSDCPHLPSVEPVPEQGIDTNAACEECSSTQENWAC
LVCYKVLCGRYVNEHMSQHGHGVGHPLTLSFSDLSVWCYECEAYIDNQVLYAAKNAAHQS
KFGEELPWSYGER
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacattgagaacagaaacttcaaataccgatggtggacttcgacgttcacaccgt
cttaattctggacaaccggctaaacagcctaccaaagtatctgcagcgttattggcagcc
aagaggaaagcaaagcaacgtaatatgaacaagaaacaaaatgatattattagagacatc
tatcagaatgcaatggattcaaaatccatgttccataaacctactggtttagtttatgat
agacgcatggctgaacatcgctgtatgtgggattcaacctatccagagtgtcctgaacgc
ttaacacgagtacttgagaggtgtgaggaattgggccttgttcagtgctgcaaggaaatt
ttacctcgtgaggcaacagaaaaagaactgctttcaaaacacacacctgaacaaatcgca
attcttaaagctactgaaaatgtttcggatgaacagtacttagaaaacctctcctcaaaa
tatgatgctatatatattcatccgagcacttatcgtctatctctgcttgctgctggaagt
acgatagaattggttgaaaacatttgtaaaggtgcagttcaaaatggaatggctattgtt
aggcctccaggtcatcatgcaatgaaaagtgaatattgtggttattgtttttttaacaat
gtggccatagcagctaaccatgctctggagaatttgggtctttctcgtattttgattatt
gattgggatgttcatcatggtcaagccactcagcaaatgttttatgatgacccaagggtt
gtttacttctcgatccatcgttatgagcatggaacattttggccaaaccttcgagaaagt
gactttgactatgttggaaaaaatatgggtgctggatttaacttcaacgtcccactaaat
gccactggcatggctgatgccgattatcttgctattttccagcaagtgctacttccaatg
gcttgcgagtttcagccagaactcataatagtgtctgcaggatatgatgctgccattgga
tgtccagagggtgaaatggagttgacaccagcatgctatgcccatcttataaacagcctt
tcagcccttgccaatggaaaactggctgtggtgttggagggtggctactgcctccgttct
cttgctgagggtgcagctctaacattgcgagcattactggggcaccctacaccttctcta
cccccaatggcacctccatctgacgtaattaggaacactatacttgatgtcatttactca
catcggcctttttggaactgcttccaattacaagacacatggtcattatctgaacaagag
aacaaggatccacttgtgtccctccctgctagacacataccaagagcaatcttccttgga
ccaaccggtcctcctccttcctcttttgaaaccaggaactgttatccagttcaaagttct
gttttcctcatgtctgttgcatcaaaactgaatagccttatttcaagtacaaagttgatc
aacccagtcaataaattatcgatagtatatgatgcccgtatgctgaagcattttaacaga
ggtgaaacatctcatccagaacgacccgaaagagtttcaagtatttattctatgctcgag
gactttgaagtcttgcaaaggtgtaatcttgtaccttcacgagtggccactgaagaggaa
ctattattggtgcatactcaggaccatgtgtctgctatgcagtctttggcaacaaaatct
gaagatgaacttgataagcaacaaaaaaaaatgcgttctgtgtatcttcataacagctcc
tatgagtcagcatcagtggcagccggatgtgtctttcaggttgtcgatgcagtgttgagt
ggagagagtgcgtctggagtggctgtggtccgcccacctggccatcatgctgaatctgac
aatgcgtgtggcttctgtgtgttcaacaatgtttcccttgctgctaaatatgctttagag
aaacatggcctgtcgagaattcttcttgtagattgggatgtgcaccatggaaatggaacc
cagcacatttttgaatcagaccctcgagttctgtacatttcacttcatcgctatgataat
ggaagttttttccctggatctttggatgctggtcatgataaagttgggcttggtaaaggt
gaaggtttcaatgtgaatataccttggaacaagaaagggatgaatgatggcgactacatc
actgcctttcatcaaattgttcttccaattgcatatcagttcaatccagaactggtcctt
gtatctgctggttttgatgcggctgtgggagatccacttggtgggtgcaaggtatctccc
gagtgttacggccacatgacccactggctccatgggttagctggtggacgcacaatcctc
tgtttagaaggtggctacaatctgaattccatttcatatgcaatgacaatgtgctgtaaa
gctcttctaggggatcctctgcctatgttggagaaaggctcagtagctagtcttaatggt
atccaaacaatacgcaccgtttgttcagttcaagaaaaatactggccttgtcttcgattt
caagtggctcttccagtagaagatgatattttgtcatcgcaggagagtactgaggatctc
tctaggatgctggctaaagttgagttgactgagagagaaatttccatgaaccaccctaag
gatggagaagcgtccagagctattaaactggtagtagactctggagatgttgctagttac
gctcgaacgtgtgcgccagacagatcccagggtaattcttcatcaggagcaggtccaagt
tctggaggaagtggagaggggtcttctctgggatctgccaggggtggtgatgggagccgc
ccaactctggttgattacttgtctgagaacatgcagatgctagtggaagagagaatgttt
gccgtggttccactgtcagactgtcctcacttacctagtgtggaacctgtgccggagcaa
ggtattgataccaatgcagcatgtgaagagtgtagcagcacacaggaaaattgggcatgt
ctcgtgtgctacaaggtactttgtggacgttatgtcaatgagcatatgtctcaacatggc
catggtgtaggtcatcctttgactttgagcttctcagacctatcagtttggtgctatgaa
tgtgaggcttacattgacaatcaagttttgtatgccgctaaaaatgctgctcatcaaagc
aaatttggtgaagagcttccttggagttatggagaaagataa
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integrated database retrieval system
